Sequence-Based Mutation Analysis Hemochromatosis
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Hemochromatosis>>Task 6: Sequence-based mutation analysis
Contents
Riddle of the Task
Coming soon...
Short task description
Detailed description: Sequence-based mutation analysis
Protocol
A protocol with a description of the data acquisition and other scripts used for this task is available here.
SNPs
From MSUD: M35T V53M G93R Q127H A162S L183P T217I R224W E277K C282S
Amino acid features
<figtable id="TODO_ID">
| Mutation | Hydrophobic (wt) | Hydrophobic (mt) | Polarity (wt) | Polarity (mt) | Charge (wt) | Charge (mt) | pH (wt) | pH (mt) | Volume (wt) | Volume (mt) |
|---|---|---|---|---|---|---|---|---|---|---|
| M35T | 1.9 | -0.7 | nonpolar | polar | neutral | neutral | neutral | weak acidic | 124 | 93 |
| V53M | 4.2 | 1.9 | nonpolar | nonpolar | neutral | neutral | neutral | neutral | 105 | 124 |
| G93R | -0.4 | -4.5 | nonpolar | polar | neutral | positive | neutral | strongly basic | 48 | 148 |
| Q127H | -3.5 | -3.2 | polar | polar | neutral | neutral/positive | weak basic | weak basic | 114 | 118 |
| A162S | 1.8 | -0.8 | nonpolar | polar | neutral | neutral | neutral | weak acidic | 67 | 73 |
| L183P | 3.8 | -1.6 | nonpolar | nonpolar | neutral | neutral | neutral | neutral | 124 | 90 |
| T217I | -0.7 | 4.5 | polar | nonpolar | neutral | neutral | weak acidic | neutral | 93 | 124 |
| R224W | -4.5 | -0.9 | polar | nonpolar | positive | neutral | strongly basic | weak basic | 148 | 163 |
| E277K | -3.5 | -3.9 | polar | polar | negative | positive | acidic | basic | 109 | 135 |
| C282S | 2.5 | -0.8 | polar | polar | neutral | neutral | acidic | weak acidic | 86 | 73 |
</figtable>
PyMol visualization
Secondary structure
DUMMY
References
