Difference between revisions of "Canavan Disease 2011"

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(New page: == Summary == The example disease causes the example syndrome. Canavan's Disease is an inherited neurodegenerative disease. It was first generalized by [http://en.wikipedia.org/wiki/Myrtel...)
 
 
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== Summary ==
  
== Summary ==
  +
Canavan's Disease is an inherited neurodegenerative disease. It was first generalized by [http://en.wikipedia.org/wiki/Myrtelle_Canavan Dr. Myrtelle Canavan] in 1931 on the case of an infant deceased at the age of 16 months. While it is extremely rare in the general population, studies have shown Canavan's Disease to occur among eastern European [http://en.wikipedia.org/wiki/Ashkenazi_Jews Ashkenazi jews] at a rate of one carrier in every 57 individuals. It is inherited in a Mendelian autosomal recessive fashion, resulting in a risk of 25% for a child of two carriers to be affected by the disease.
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The example disease causes the example syndrome.
  
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Canavan's Disease is an inherited neurodegenerative disease. It was first generalized by [http://en.wikipedia.org/wiki/Myrtelle_Canavan | Dr. Myrtelle Canavan] in 1931 on the case of an infant deceased at the age of 16 months. While it is vertuelly not existent in the general population, Canavan's Disease occurs in the eastern Europe among Ashkenazi jews at a rate of one carrier in every 40 individuals. It is inherited in a Mendelian autosomal recessive fashion, resulting in a risk of 25% for a child of to carriers to be affected by the disease.
  
   
 
== Phenotype ==
  
== Phenotype ==
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Symptoms usually appear in early infancy and progress rapidly, and with basic supportive care average life expectancy is at 18 months. In rare cases life expectancy can be as high as 33 years, although in this particular case patient was in the fully vegetative state at the last few year of her life.
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Symptoms usually appear in early infancy and progress rapidly, and with basic supportive care average life expectancy is about 18 months. In rare cases life expectancy can be as high as 33 years, although in this particular case the patient had degraded into a 'persistent vegetative state' at that age.
   
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Symptoms are mainly neurologically in nature, with the most commonly observed ones being:
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Symptoms are mainly neurologically in nature, with the most commonly observed ones being:
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* mental retardation
  
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* degradation of motor skills
  
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* abnormal muscle tone
  
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* megalocephaly
  
   
  +
* Mental retardation
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More rarley observed symptoms are:
 
  +
* Degradation of motor skills (especially head control)
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* seizures
  
  +
* Abnormal muscle tone (muscles are either constantly too tense or too relaxed)
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* blindness
  
  +
* Megalocephaly (abnormally enlarged head)
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* paralysis
  
   
  +
More rareley observed symptoms are:
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== Treatment ==
  
   
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* Seizures
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There currently no cure for Canavan's Disease.Current treatment options are purley supportive and concentrate only on the symptoms.
 
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* Blindness
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* Paralysis
   
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The neurodegeneration chiefly affects the cerebral white matter, which is made up by the axons connecting individual neurons. The disease attacks these axons by an as-of-yet unknown mechanism, although the compound [http://en.wikipedia.org/wiki/N-Acetylaspartate N-Acetate aspartate] appears to play a role in this process.
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Phenotypic description of the disease.
 
   
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(Describe this in your own words, avoid plagiarism. Summarize the information from different sources.)
  
   
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=== Cross-references ===
 
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See also description of this disease in
  
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* specific link to Wikipedia
  
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* specific link to HGMD
  
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* specific link to OMIM
  
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... (see [[Resource data|databases in "resources"]])
  
   
 
== Biochemical disease mechanism ==
  
== Biochemical disease mechanism ==
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The example protein is involved in the example pathway...
  
   
  +
Much of the disease mechanism still lies in the dark; mutations causing the disease have been traced to a gene encoding for [[Aspartoacyclase http://www.ncbi.nlm.nih.gov/omim/608034]], an enzyme that catalyzes the hydrolysis of N-Acetate aspartate into acetate and aspartate. It is made up of six exons in a gene called ASPA on the 17th chromosome, and its overall length is 313 amino acids.
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Ideally, include a graphical pathway representation like this one: [[Image:SphingolipidMetabolism.png|frame|Sphingolipid Metabolism (source: KEGG) highlighting disease associated enzymes]]
  
   
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(see above: own words, no plagiarism)
  
   
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<br style="clear: both" />
  
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=== Cross-references ===
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== Cross-Reference ==
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* [http://www.ncbi.nlm.nih.gov/omim/271900 OMIM]
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* link to KEGG
  
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* [http://en.wikipedia.org/wiki/Canavan_disease Wikipedia]
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* link to MetaCyc
  
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* [http://www.nlm.nih.gov/medlineplus/ency/article/001586.htm MedLine Plus]
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... see [[Resource data|databases in "resources"]]
  
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* [http://www.ncbi.nlm.nih.gov/books/NBK1234/ NCBI Bookshelf]
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* [http://www.uniprot.org/uniprot/P45381 Uniprot]
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* [http://www.pdb.org/pdb/explore/explore.do?structureId=2O53 PDB Structure]
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* [http://prezi.com/dfyuh9lqsadc/canavans-disease/ Slides to the talk about Canavan's Disease]
   
 
== Mutations ==
  
== Mutations ==
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Current knowledge about mutations associated with the disease. - Separate into disease causing and neutral mutations. -- These sequence pages will be the starting point for collecting prediction results and result discussions.
  
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'''Note:''' Currently (13.5.) you only ''need to'' care about the reference sequence pages. -- At a later stage we will assign mutations we expect you to work on. Then, it will make sense to create on page per mutation that is assigned to you.
  
   
 
=== Reference sequence ===
  
=== Reference sequence ===
   
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[[Reference_Sequence_Aspartoacyclase|Reference Sequence from UniProt]]
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Which sequence does not cause the disease and is most often found in the population.
 
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* [[example_sequence|Create a page for the reference sequence.]]
 
   
 
=== Neutral mutations ===
  
=== Neutral mutations ===
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''Coming soon''
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* [[example_sequence|Create one page per mutated sequence]].
  
   
 
=== Disease causing mutations ===
  
=== Disease causing mutations ===
  +
''Coming soon''
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* [[example_sequence|Create one page per mutated sequence]].
  
  +
  +
== Tasks ==
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[[ASPA Sequence Alignments]]
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[[ASPA Sequence Based Predictions]]
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[[ASPA Homology Modelling]]
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[[ASPA Mapping SNPs]]
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[[ASPA Sequence Based Mutation Analysis]]
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[[ASPA Structure Based Mutation Analysis]]
  +
  +
[[ASPA Molecular Dynamics Simulation]]
  +
  +
[[ASPA Normal Mode Analysis]]
  +
  +
[[ASPA Molecular Dynamics Simulation Analysis]]

Latest revision as of 15:33, 17 April 2012

Summary

Canavan's Disease is an inherited neurodegenerative disease. It was first generalized by Dr. Myrtelle Canavan in 1931 on the case of an infant deceased at the age of 16 months. While it is extremely rare in the general population, studies have shown Canavan's Disease to occur among eastern European Ashkenazi jews at a rate of one carrier in every 57 individuals. It is inherited in a Mendelian autosomal recessive fashion, resulting in a risk of 25% for a child of two carriers to be affected by the disease.

Phenotype

Symptoms usually appear in early infancy and progress rapidly, and with basic supportive care average life expectancy is about 18 months. In rare cases life expectancy can be as high as 33 years, although in this particular case the patient had degraded into a 'persistent vegetative state' at that age.

Symptoms are mainly neurologically in nature, with the most commonly observed ones being:

  • Mental retardation
  • Degradation of motor skills (especially head control)
  • Abnormal muscle tone (muscles are either constantly too tense or too relaxed)
  • Megalocephaly (abnormally enlarged head)

More rareley observed symptoms are:

  • Seizures
  • Blindness
  • Paralysis

The neurodegeneration chiefly affects the cerebral white matter, which is made up by the axons connecting individual neurons. The disease attacks these axons by an as-of-yet unknown mechanism, although the compound N-Acetate aspartate appears to play a role in this process.


Biochemical disease mechanism

Much of the disease mechanism still lies in the dark; mutations causing the disease have been traced to a gene encoding for Aspartoacyclase http://www.ncbi.nlm.nih.gov/omim/608034, an enzyme that catalyzes the hydrolysis of N-Acetate aspartate into acetate and aspartate. It is made up of six exons in a gene called ASPA on the 17th chromosome, and its overall length is 313 amino acids.


Cross-Reference

Mutations

Reference sequence

Reference Sequence from UniProt

Neutral mutations

Coming soon

Disease causing mutations

Coming soon

Tasks

ASPA Sequence Alignments

ASPA Sequence Based Predictions

ASPA Homology Modelling

ASPA Mapping SNPs

ASPA Sequence Based Mutation Analysis

ASPA Structure Based Mutation Analysis

ASPA Molecular Dynamics Simulation

ASPA Normal Mode Analysis

ASPA Molecular Dynamics Simulation Analysis

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