Search results

The query sequences for the 4 subunits of BCKDC locate at /mnt/home/student/weish/master-practical-2013/task01/. Results for sequence search locate in the directory /mnt/home/student/weish/master-practical-2013/task02/01-seq-search/results. For BLAST and PSI-BLAST

* Output of IUPred are stored in the directory <tt>/mnt/home/student/weish/master-practical-2013/task03/02-disordered-protein/iupred</tt> cd /mnt/home/student/weish/master-practical-2013/task03/03-transmembrane-helices

* All selected structures can be found at: <tt>/mnt/home/student/weish/master-practical-2013/task04/structures/</tt> hhsearch -i /mnt/home/student/weish/master-practical-2013/task01/refseq_BCKDHA_protein.fasta -d /mnt/project/pr

Computed models are stored in the directory <tt>/mnt/home/student/weish/master-practical-2013/task05/models</tt> on the student server.

blastpgp -d /mnt/project/pracstrucfunc13/data/big/big_80 -i /mnt/home/student/weish/master-practical-2013/task01/refseq_BCKDHA_protein.fasta -j 5 -h 10e-10 -Q

...sequences for the 4 subunits of BCKDC locate at <nowiki>/mnt/home/student/weish/master-practical-2013/task01/</nowiki>. Results for sequence search locate in the directory <nowiki>/mnt/home/student/weish/master-practical-2013/task02/01-seq-search/results</nowiki>.