Task2 Hemochromatosis Protocol

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Revision as of 20:58, 5 May 2012 by Bernhoferm (talk | contribs) (Blast)

Sequence Searches

Blast

TSK="/mnt/home/student/bernhoferm/task2"
BIG="/mnt/project/pracstrucfunc12/data/big"
time blastall -p blastp -d $BIG/big_80 -i $TSK/Q30201.fasta -b 1250 -v 1250 -o $TSK/align/blast_default_1250.out

real	1m8.589s
user	1m6.810s
sys	0m1.110s

PSI-Blast

HHblits

MSA