Difference between revisions of "Canavan Disease: Task 02 - Supplement"
From Bioinformatikpedia
(→Multiple Sequence Alignments) |
(→Multiple Sequence Alignments) |
||
| Line 16: | Line 16: | ||
|| below30 || <figure id="Mab3">[[Image:CanavanAlignment_MafftBelow30-alignment.png|centre|thumb|694px|''']]</figure> |
|| below30 || <figure id="Mab3">[[Image:CanavanAlignment_MafftBelow30-alignment.png|centre|thumb|694px|''']]</figure> |
||
|- |
|- |
||
| + | || wholeRange || to be presented on request, since file size too large |
||
| − | || wholeRange || <figure id="Mami">[[Image:CanavanAlignment_MafftMix-alignment.png|centre|thumb|694px|''']]</figure> |
||
|- |
|- |
||
|rowspan="3"| MUSCLE |
|rowspan="3"| MUSCLE |
||
| Line 28: | Line 28: | ||
|| above60 || <figure id="Tca6">[[Image:CanavanAlignment_TCoffeeAbove60-alignment.png|centre|thumb|694px|''']]</figure> |
|| above60 || <figure id="Tca6">[[Image:CanavanAlignment_TCoffeeAbove60-alignment.png|centre|thumb|694px|''']]</figure> |
||
|- |
|- |
||
| + | || below30 || to be presented on request, since file size too large |
||
| − | || below30 || <figure id="Tcb3">[[Image:CanavanAlignment_TCoffeeBelow30-alignment.png|centre|thumb|694px|''']]</figure> |
||
|- |
|- |
||
| + | || wholeRange || to be presented on request, since file size too large |
||
| − | || wholeRange || <figure id="Tcmi">[[Image:CanavanAlignment_TCoffeeMix-alignment.png|centre|thumb|694px|''']]</figure> |
||
|- |
|- |
||
|rowspan="3"| EXPRESSO |
|rowspan="3"| EXPRESSO |
||
|| above60 || <figure id="Exa6">[[Image:CanavanAlignment_ExpressoAbove60-alignment.png|centre|thumb|694px|''']]</figure> |
|| above60 || <figure id="Exa6">[[Image:CanavanAlignment_ExpressoAbove60-alignment.png|centre|thumb|694px|''']]</figure> |
||
|- |
|- |
||
| + | || below30 || to be presented on request, since file size too large |
||
| − | || below30 || <figure id="Exb3">[[Image:CanavanAlignment_ExpressoBelow30-alignment.png|centre|thumb|694px|''']]</figure> |
||
|- |
|- |
||
| + | || wholeRange || to be presented on request, since file size too large |
||
| − | || wholeRange || <figure id="Exmi">[[Image:CanavanAlignment_ExpressoMix-alignment.png|centre|thumb|694px|''']]</figure> |
||
|- |
|- |
||
|- |
|- |
||
Revision as of 14:05, 31 August 2013
Link back to Task 02: Alignments
Multiple Sequence Alignments
<figtable id="MSAPics">
| Comparison of Multiple Sequence Alignment Tools | ||
|---|---|---|
| Method | Used Set | Alignment |
| MAFFT | above60 | <figure id="Maa6"></figure> |
| below30 | <figure id="Mab3"></figure> | |
| wholeRange | to be presented on request, since file size too large | |
| MUSCLE | above60 | <figure id="Mua6"></figure> |
| below30 | <figure id="Mub3"></figure> | |
| wholeRange | <figure id="Mumi"></figure> | |
| T-COFFEE | above60 | <figure id="Tca6"></figure> |
| below30 | to be presented on request, since file size too large | |
| wholeRange | to be presented on request, since file size too large | |
| EXPRESSO | above60 | <figure id="Exa6"></figure> |
| below30 | to be presented on request, since file size too large | |
| wholeRange | to be presented on request, since file size too large | |
</figtable>
