Difference between revisions of "Canavan Disease: Task 02 - Supplement"

From Bioinformatikpedia
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Link back to Task 02: [[Canavan_Disease:_Task_02_-_Alignments|Alignments]]
  
Link back to Task 02: [[Canavan_Disease:_Task_02_-_Alignments|Alignments]]
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== Multiple Sequence Alignments ==
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<figtable id="MSAPics">
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{| border="1" cellpadding="9" cellspacing="0" align="center"
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|-
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! colspan="3" style="background:#87cefa;" | Comparison of Multiple Sequence Alignment Tools
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|-
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! style="background:#BFBFBF;" align="center" | Method
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! style="background:#BFBFBF;" | Used Set
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! style="background:#BFBFBF;" | Alignment
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|-
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|rowspan="3"| MAFFT
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|| above60 || XXX
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|-
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|| below30 || xxx
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|-
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|| wholeRange || xxx
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|-
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|rowspan="3"| MUSCLE
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|| above60 || XXX
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|-
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|| below30 || xxx
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|-
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|| wholeRange || xxx
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|-
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|rowspan="3"| T-COFFEE
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|| above60 || XXX
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|-
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|| below30 || xxx
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|-
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|| wholeRange || xxx
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|-
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|rowspan="3"| EXPRESSO
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|| above60 || XXX
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|-
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|| below30 || xxx
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|-
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|| wholeRange || xxx
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|-
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|-
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|}
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<center><small>'''<caption>''' Alignments visualized with Chimera </caption></small></center>
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</figtable>

Revision as of 12:02, 29 August 2013

Link back to Task 02: Alignments

Multiple Sequence Alignments

<figtable id="MSAPics">

Comparison of Multiple Sequence Alignment Tools
Method Used Set Alignment
MAFFT above60 XXX
below30 xxx
wholeRange xxx
MUSCLE above60 XXX
below30 xxx
wholeRange xxx
T-COFFEE above60 XXX
below30 xxx
wholeRange xxx
EXPRESSO above60 XXX
below30 xxx
wholeRange xxx
Alignments visualized with Chimera

</figtable>

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