Difference between revisions of "Canavan Disease: Task 02 - Supplement"
From Bioinformatikpedia
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Link back to Task 02: [[Canavan_Disease:_Task_02_-_Alignments|Alignments]] |
Link back to Task 02: [[Canavan_Disease:_Task_02_-_Alignments|Alignments]] |
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+ | |||
+ | == Multiple Sequence Alignments == |
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+ | <figtable id="MSAPics"> |
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+ | {| border="1" cellpadding="9" cellspacing="0" align="center" |
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+ | |- |
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+ | ! colspan="3" style="background:#87cefa;" | Comparison of Multiple Sequence Alignment Tools |
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+ | |- |
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+ | ! style="background:#BFBFBF;" align="center" | Method |
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+ | ! style="background:#BFBFBF;" | Used Set |
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+ | ! style="background:#BFBFBF;" | Alignment |
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+ | |- |
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+ | |rowspan="3"| MAFFT |
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+ | || above60 || XXX |
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+ | |- |
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+ | || below30 || xxx |
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+ | |- |
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+ | || wholeRange || xxx |
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+ | |- |
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+ | |rowspan="3"| MUSCLE |
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+ | || above60 || XXX |
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+ | |- |
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+ | || below30 || xxx |
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+ | |- |
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+ | || wholeRange || xxx |
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+ | |- |
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+ | |rowspan="3"| T-COFFEE |
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+ | || above60 || XXX |
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+ | |- |
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+ | || below30 || xxx |
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+ | |- |
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+ | || wholeRange || xxx |
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+ | |- |
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+ | |rowspan="3"| EXPRESSO |
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+ | || above60 || XXX |
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+ | |- |
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+ | || below30 || xxx |
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+ | |- |
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+ | || wholeRange || xxx |
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+ | |- |
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+ | |- |
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+ | |} |
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+ | <center><small>'''<caption>''' Alignments visualized with Chimera </caption></small></center> |
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+ | </figtable> |
Revision as of 12:02, 29 August 2013
Link back to Task 02: Alignments
Multiple Sequence Alignments
<figtable id="MSAPics">
Comparison of Multiple Sequence Alignment Tools | ||
---|---|---|
Method | Used Set | Alignment |
MAFFT | above60 | XXX |
below30 | xxx | |
wholeRange | xxx | |
MUSCLE | above60 | XXX |
below30 | xxx | |
wholeRange | xxx | |
T-COFFEE | above60 | XXX |
below30 | xxx | |
wholeRange | xxx | |
EXPRESSO | above60 | XXX |
below30 | xxx | |
wholeRange | xxx |
</figtable>