Difference between revisions of "Task 2 (MSUD)"
From Bioinformatikpedia
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===== Low sequence identity ===== |
===== Low sequence identity ===== |
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+ | Mafft: |
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+ | [[Image:MSUD_DLD_low_seq_ident_mafft.png]] |
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+ | |||
+ | Muscle: |
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+ | [[Image:MSUD_DLD_low_seq_ident_muscle.png]] |
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+ | |||
+ | T-Coffee: |
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+ | [[Image:MSUD_DLD_low_seq_ident_tcoffee.png]] |
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===== High sequence identity ===== |
===== High sequence identity ===== |
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+ | |||
+ | Mafft: |
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+ | [[Image:MSUD_DLD_high_seq_ident_mafft.png]] |
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+ | |||
+ | Muscle: |
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+ | [[Image:MSUD_DLD_high_seq_ident_muscle.png]] |
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+ | |||
+ | T-Coffee: |
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+ | [[Image:MSUD_DLD_high_seq_ident_tcoffee.png]] |
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===== Whole range sequence identity ===== |
===== Whole range sequence identity ===== |
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+ | |||
+ | Mafft: |
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+ | [[Image:MSUD_DLD_whole_range_seq_ident_mafft.png]] |
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+ | |||
+ | Muscle: |
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+ | [[Image:MSUD_DLD_whole_range_seq_ident_muscle.png]] |
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+ | |||
+ | T-Coffee: |
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+ | [[Image:MSUD_DLD_whole_range_seq_ident_tcoffee.png]] |
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=== Discussion === |
=== Discussion === |
Revision as of 14:37, 4 May 2013
Contents
Sequence searches
Results
Discussion
Multiple sequence alignments
Results
The datsets can be found in /mnt/home/student/schillerl/MasterPractical/task2/datasets/
.
The MSAs are located at /mnt/home/student/schillerl/MasterPractical/task2/MSAs/
.
In the following sections the MSAs, visualised with Jalview, are shown.