Difference between revisions of "Task5 Hemochromatosis Protocol"

From Bioinformatikpedia
(OMIM)
(SNPedia)
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=== SNPedia ===
 
=== SNPedia ===
   
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For [http://www.snpedia.com/index.php/SNPedia SNPedia] we looked at the SNPs listed under [http://www.snpedia.com/index.php/HFE HFE].
   
 
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Revision as of 12:47, 10 June 2012

Translation and alignment tools

  • Translation (RNA/DNA->AA): Link
  • Online alignment: Link
  • Reference protein sequence: Q30201


SNP search


HGMD

We used the non-professional version of HGMD and looked for SNPs using the gene symbol HFE as query.


dbSNP


SNPdbe

We've searched SNPdbe for SNPs using NP_000401, Q30201, and HFE as query IDs.


OMIM

We searched OMIM for the HFE Gene and looked at the listed allelic variants.


SNPedia

For SNPedia we looked at the SNPs listed under HFE.


Mapping