Difference between revisions of "Task5 Hemochromatosis Protocol"

From Bioinformatikpedia
(→‎HGMD)
(→‎SNPdbe)
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We've searched [http://www.rostlab.org/services/snpdbe/ SNPdbe] for SNPs using [http://www.ncbi.nlm.nih.gov/protein/NP_000401 NP_000401] and [http://www.uniprot.org/uniprot/Q30201 Q30201] as querry IDs.
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We've searched [http://www.rostlab.org/services/snpdbe/ SNPdbe] for SNPs using [http://www.ncbi.nlm.nih.gov/protein/NP_000401 NP_000401] and [http://www.uniprot.org/uniprot/Q30201 Q30201] as query IDs.
 
* Quick-Link: [http://www.rostlab.org/services/snpdbe/dosearch.php?id=name&val=NP_000401&organism2=human&organism1= NP_000401]
  
* Quick-Link: [http://www.rostlab.org/services/snpdbe/dosearch.php?id=name&val=NP_000401&organism2=human&organism1= NP_000401]
 
* Quick-Link: [http://www.rostlab.org/services/snpdbe/dosearch.php?id=name&val=Q30201&organism2=human&organism1= Q30201]
  
* Quick-Link: [http://www.rostlab.org/services/snpdbe/dosearch.php?id=name&val=Q30201&organism2=human&organism1= Q30201]

Revision as of 20:12, 9 June 2012

Translation and alignment tools

  • Translation (RNA/DNA->AA): Link
  • Online alignment: Link
  • Reference protein sequence: Q30201


SNP search


HGMD

We used the non-professional version of HGMD and looked for SNPs using the gene symbol HFE as query.


dbSNP


SNPdbe

We've searched SNPdbe for SNPs using NP_000401 and Q30201 as query IDs.


OMIM


SNPedia


Mapping


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