Difference between revisions of "Fabry:Sequence alignments (sequence searches and multiple alignments):Results"

From Bioinformatikpedia
m (HHblits / HHsearch)
Line 10: Line 10:
   
   
=== HHblits / HHsearch ===
+
=== HHblits ===
 
   
 
=== Comparison ===
 
=== Comparison ===

Revision as of 20:32, 3 May 2012

Please see Task 2 for our skripts and line of action on this topic.

Sequence searches

Blast

GO terms of P06280 and each BLAST hit (with Evalue <= 0.003) compared. Percentage terms shared, in relation to number of GO terms of P06280 (AGAL_HUMAN) in the upper picture, in the secon picture in relation to number of each hit
Histogram of the logarithmic E-values of the BLAST hits for P06280

Psi-Blast

HHblits

Comparison

Venn diagram of proteins found by BLAST, HHBlits and HHBlits with 8 iterations