Difference between revisions of "Fabry:Sequence alignments (sequence searches and multiple alignments):Results"

From Bioinformatikpedia
(Blast)
(Added Evalue histogram)
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== Sequence searches ==
 
== Sequence searches ==
 
=== Blast ===
 
=== Blast ===
[[File:Blastsearch_default_v700_ids_GOterms_comparison.png|thumb|left| GO terms of P06280 and each Blast hit (with Evalue <= 0.003) compared.
+
[[File:Blastsearch_default_v700_ids_GOterms_comparison.png|thumb|left| GO terms of P06280 and each BLAST hit (with Evalue <= 0.003) compared.
 
Percentage terms shared, in relation to number of GO terms of P06280 (AGAL_HUMAN) in the upper picture, in the secon picture in relation to number of each hit]]
 
Percentage terms shared, in relation to number of GO terms of P06280 (AGAL_HUMAN) in the upper picture, in the secon picture in relation to number of each hit]]
  +
[[File:blastsearch_default_v700_Evalues.png|thumb|left| Histogram of the logarithmic E-values of the BLAST hits for P06280]]
   
 
=== Psi-Blast ===
 
=== Psi-Blast ===

Revision as of 16:07, 3 May 2012

Please see Task 2 for our skripts and line of action on this topic.

Sequence searches

Blast

GO terms of P06280 and each BLAST hit (with Evalue <= 0.003) compared. Percentage terms shared, in relation to number of GO terms of P06280 (AGAL_HUMAN) in the upper picture, in the secon picture in relation to number of each hit
Histogram of the logarithmic E-values of the BLAST hits for P06280

Psi-Blast

HHblits / HHsearch