Difference between revisions of "Fabry:Sequence alignments (sequence searches and multiple alignments):Results"
From Bioinformatikpedia
Rackersederj (talk | contribs) m (→HHblits / HHsearch) |
Staniewski (talk | contribs) |
||
| (61 intermediate revisions by 2 users not shown) | |||
| Line 1: | Line 1: | ||
| − | Please see [[Fabry:Sequence_alignments_(sequence_searches_and_multiple_alignments) | Task 2 ]] for our skripts and line of action on this topic. |
||
| − | |||
| − | == Sequence searches == |
||
| − | === Blast === |
||
| − | [[File:Blastsearch_default_v700_ids_GOterms_comparison.png|thumb|left| GO terms of P06280 and each BLAST hit (with Evalue <= 0.003) compared. |
||
| − | Percentage terms shared, in relation to number of GO terms of P06280 (AGAL_HUMAN) in the upper picture, in the secon picture in relation to number of each hit]] |
||
| − | [[File:blastsearch_default_v700_Evalues.png|thumb|right| Histogram of the logarithmic E-values of the BLAST hits for P06280]] |
||
| − | |||
| − | === Psi-Blast === |
||
| − | |||
| − | |||
| − | === HHblits === |
||
| − | |||
| − | === Comparison === |
||
| − | [[File:venn_blast_hhblits.png|thumb|right| Venn diagram of proteins found by BLAST, HHBlits and HHBlits with 8 iterations]] |
||
