Difference between revisions of "Task 2 (MSUD)"
From Bioinformatikpedia
(→High sequence identity) |
(→BCKDHA) |
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===== Low sequence identity ===== |
===== Low sequence identity ===== |
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| + | |||
| + | Mafft: |
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| + | [[Image:MSUD_BCKDHA_low_seq_ident_mafft.png]] |
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| + | |||
| + | Muscle: |
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| + | [[Image:MSUD_BCKDHA_low_seq_ident_muscle.png]] |
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| + | |||
| + | T-Coffee: |
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| + | [[Image:MSUD_BCKDHA_low_seq_ident_tcoffee.png]] |
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===== High sequence identity ===== |
===== High sequence identity ===== |
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Mafft: |
Mafft: |
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[[Image:MSUD_BCKDHA_high_seq_ident_mafft.png]] |
[[Image:MSUD_BCKDHA_high_seq_ident_mafft.png]] |
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| + | |||
| + | Muscle: |
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| + | [[Image:MSUD_BCKDHA_high_seq_ident_muscle.png]] |
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| + | |||
| + | T-Coffee: |
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| + | [[Image:MSUD_BCKDHA_high_seq_ident_tcoffee.png]] |
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===== Whole range sequence identity ===== |
===== Whole range sequence identity ===== |
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| + | |||
| + | Mafft: |
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| + | [[Image:MSUD_BCKDHA_whole_range_seq_ident_mafft.png]] |
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| + | |||
| + | Muscle: |
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| + | [[Image:MSUD_BCKDHA_whole_range_seq_ident_muscle.png]] |
||
| + | |||
| + | T-Coffee: |
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| + | [[Image:MSUD_BCKDHA_whole_range_seq_ident_tcoffee.png]] |
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==== BCKDHB ==== |
==== BCKDHB ==== |
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Revision as of 13:31, 4 May 2013
Contents
Sequence searches
Results
Discussion
Multiple sequence alignments
Results
The datsets can be found in /mnt/home/student/schillerl/MasterPractical/task2/datasets/.
The MSAs are located at /mnt/home/student/schillerl/MasterPractical/task2/MSAs/.
BCKDHA
Low sequence identity
Mafft:
Muscle:
T-Coffee:
High sequence identity
Mafft:
Muscle:
T-Coffee:
Whole range sequence identity
Mafft:
Muscle:
T-Coffee:
