Difference between revisions of "Hemochromatosis SNPdbe SNP TABLE"

From Bioinformatikpedia
Line 1: Line 1:
 
<figtable id="TODO_ID">
 
<figtable id="TODO_ID">
{| class="wikitable" style="width: 800px; margin: 1em 1em 1em 0; border-collapse: collapse; border-style: solid; border-width:0px; border-color: #000"
+
{| class="wikitable" style="width: 900px; margin: 1em 1em 1em 0; border-collapse: collapse; border-style: solid; border-width:0px; border-color: #000"
 
|-
 
|-
 
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |dbSNP ID
 
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |dbSNP ID
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |Mutation
+
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |Sequence
  +
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |Type
 
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |Amino acid change
 
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |Amino acid change
 
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |Position
 
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |Position
Line 10: Line 11:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs149342416
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs149342416
| style="border-style: solid; border-width: 1px 1px 1px 1px" |R6S
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620572
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Ser
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Ser
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |6
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |6
Line 17: Line 19:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs143662783
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs143662783
| style="border-style: solid; border-width: 1px 1px 1px 1px" |T17I
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620575
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Thr-Ile
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Thr-Ile
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |17
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |17
Line 24: Line 27:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs148161858
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs148161858
| style="border-style: solid; border-width: 1px 1px 1px 1px" |R23H
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620578
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |23
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |23
Line 31: Line 35:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
| style="border-style: solid; border-width: 1px 1px 1px 1px" |R26L
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Q30201
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Leu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Leu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |26
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |26
Line 38: Line 43:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs2242956
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs2242956
| style="border-style: solid; border-width: 1px 1px 1px 1px" |M35T
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620575
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Met-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Met-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |35
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |35
Line 45: Line 51:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
| style="border-style: solid; border-width: 1px 1px 1px 1px" |G43D
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Q30201
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gly-Asp
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gly-Asp
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |43
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |43
Line 52: Line 59:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs28934889
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs28934889
| style="border-style: solid; border-width: 1px 1px 1px 1px" |V53M
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620578
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Met
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Met
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |53
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |53
Line 58: Line 66:
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |1000Genome,freq,cluster
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |1000Genome,freq,cluster
 
|-
 
|-
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs28934890
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs111033557
| style="border-style: solid; border-width: 1px 1px 1px 1px" |V59M
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620578
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Met
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Met
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |59
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |59
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Not validated
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |by cluster
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs1799945
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs1799945
| style="border-style: solid; border-width: 1px 1px 1px 1px" |H63D
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |His-Asp
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |His-Asp
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |63
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |63
Line 73: Line 83:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs1800730
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs1800730
| style="border-style: solid; border-width: 1px 1px 1px 1px" |S65C
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620575
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ser-Cys
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ser-Cys
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |65
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |65
Line 80: Line 91:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
| style="border-style: solid; border-width: 1px 1px 1px 1px" |R66C
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Q30201
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Cys
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Cys
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |66
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Not validated
  +
|-
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |B990874
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Glu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |66
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |66
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
Line 87: Line 107:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs139523708
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs139523708
| style="border-style: solid; border-width: 1px 1px 1px 1px" |R67H
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |67
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |67
Line 94: Line 115:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs28934597
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs28934597
| style="border-style: solid; border-width: 1px 1px 1px 1px" |G93R
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620578
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gly-Arg
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gly-Arg
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |93
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |93
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |by cluster
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |by cluster
  +
|-
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |B990874
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ala
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |100
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Not validated
  +
|-
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |A001949
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Trp-Ala
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |103
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Not validated
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs28934596
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs28934596
| style="border-style: solid; border-width: 1px 1px 1px 1px" |I105T
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620578
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ile-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ile-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |105
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |105
Line 108: Line 147:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
| style="border-style: solid; border-width: 1px 1px 1px 1px" |M106T
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Met-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Met-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |106
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |106
Line 115: Line 155:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs28934595
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs28934595
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Q127H
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gln-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gln-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |127
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |127
Line 122: Line 163:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs149662565
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs149662565
| style="border-style: solid; border-width: 1px 1px 1px 1px" |P160T
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Pro-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Pro-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |160
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |160
Line 129: Line 171:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs145475682
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs145475682
| style="border-style: solid; border-width: 1px 1px 1px 1px" |A162S
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620575
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Ser
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Ser
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |162
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |162
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |by freq
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |by freq
  +
|-
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |B990874
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Trp-Ala
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |163
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Not validated
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs144170531
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs144170531
| style="border-style: solid; border-width: 1px 1px 1px 1px" |K166E
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620576
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Lys-Glu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Lys-Glu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |166
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |166
Line 143: Line 195:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs146519482
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs146519482
| style="border-style: solid; border-width: 1px 1px 1px 1px" |E168Q
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Gln
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Gln
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |168
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |168
Line 150: Line 203:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
| style="border-style: solid; border-width: 1px 1px 1px 1px" |A176V
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Q30201
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Val
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Val
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |176
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |176
Line 157: Line 211:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
| style="border-style: solid; border-width: 1px 1px 1px 1px" |L183P
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Leu-Pro
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Leu-Pro
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |183
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |183
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Not validated
  +
|-
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |B990874
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Pro-Val
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |188
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Not validated
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Not validated
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs4986950
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs4986950
| style="border-style: solid; border-width: 1px 1px 1px 1px" |T217I
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620576
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Thr-Ile
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Thr-Ile
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |217
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |217
Line 171: Line 235:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
| style="border-style: solid; border-width: 1px 1px 1px 1px" |R224G
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Q30201
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Gly
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Gly
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |224
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |224
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Not validated
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Not validated
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs62625346
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |R224Q
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Gln
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |224
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |by cluster,freq
 
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs144797937
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs144797937
| style="border-style: solid; border-width: 1px 1px 1px 1px" |R224W
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620579
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Trp
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Trp
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |224
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |224
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |by freq
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |by freq
  +
|-
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs62625346
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620572
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Gln
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |224
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |TODO
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |by cluster,freq
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Y230H
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Q30201
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Tyr-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Tyr-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |230
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |230
Line 199: Line 267:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs140515012
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs140515012
| style="border-style: solid; border-width: 1px 1px 1px 1px" |P245A
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Pro-Ala
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Pro-Ala
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |245
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |245
Line 206: Line 275:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
| style="border-style: solid; border-width: 1px 1px 1px 1px" |A248T
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Q30201
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |248
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |248
Line 213: Line 283:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs150402693
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs150402693
| style="border-style: solid; border-width: 1px 1px 1px 1px" |F251L
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Phe-Leu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Phe-Leu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |251
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |251
Line 220: Line 291:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs138176635
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs138176635
| style="border-style: solid; border-width: 1px 1px 1px 1px" |E252G
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Gly
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Gly
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |252
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |252
Line 227: Line 299:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
| style="border-style: solid; border-width: 1px 1px 1px 1px" |V256A
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Q30201
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ala
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ala
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |256
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |256
Line 234: Line 307:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs143846467
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs143846467
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N259S
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Asn-Ser
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Asn-Ser
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |259
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |259
Line 241: Line 315:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
| style="border-style: solid; border-width: 1px 1px 1px 1px" |G275E
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Q30201
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gly-Glu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gly-Glu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |275
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |275
Line 248: Line 323:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs140080192
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs140080192
| style="border-style: solid; border-width: 1px 1px 1px 1px" |E277K
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620576
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Lys
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Lys
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |277
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |277
Line 255: Line 331:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs1800562
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs1800562
| style="border-style: solid; border-width: 1px 1px 1px 1px" |C282Y
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620575
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Cys-Tyr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Cys-Tyr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |282
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |282
Line 262: Line 339:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs111033563
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs111033563
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Q283P
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620573
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gln-Pro
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gln-Pro
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |283
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |283
Line 269: Line 347:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs143175221
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs143175221
| style="border-style: solid; border-width: 1px 1px 1px 1px" |V295A
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ala
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ala
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |295
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |295
Line 276: Line 355:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
| style="border-style: solid; border-width: 1px 1px 1px 1px" |S311R
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Q30201
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ser-Arg
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ser-Arg
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |311
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |311
Line 283: Line 363:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs147519426
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs147519426
| style="border-style: solid; border-width: 1px 1px 1px 1px" |V315G
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Gly
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Gly
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |315
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |315
Line 290: Line 371:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs141229562
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs141229562
| style="border-style: solid; border-width: 1px 1px 1px 1px" |V318I
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ile
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ile
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |318
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |318
Line 297: Line 379:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs150716212
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs150716212
| style="border-style: solid; border-width: 1px 1px 1px 1px" |I322T
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ile-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ile-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |322
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |322
Line 304: Line 387:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs138993448
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs138993448
| style="border-style: solid; border-width: 1px 1px 1px 1px" |I327T
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ile-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ile-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |327
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |327
Line 311: Line 395:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs111033558
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs111033558
| style="border-style: solid; border-width: 1px 1px 1px 1px" |R330M
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_620578
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Met
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Met
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |330
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |330
Line 318: Line 403:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
| style="border-style: solid; border-width: 1px 1px 1px 1px" |M339V
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Q30201
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Met-Val
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Met-Val
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |339
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |339
Line 325: Line 411:
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs146508927
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs146508927
| style="border-style: solid; border-width: 1px 1px 1px 1px" |R347H
+
| style="border-style: solid; border-width: 1px 1px 1px 1px" |NP_000401
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |347
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |347

Revision as of 01:12, 10 June 2012

<figtable id="TODO_ID">

dbSNP ID Sequence Type Amino acid change Position Effect Experimental evidence
rs149342416 NP_620572 Non-synonymous Arg-Ser 6 TODO by freq
rs143662783 NP_620575 Non-synonymous Thr-Ile 17 TODO by freq
rs148161858 NP_620578 Non-synonymous Arg-His 23 TODO 1000Genome,freq,cluster
N/A Q30201 Non-synonymous Arg-Leu 26 TODO Not validated
rs2242956 NP_620575 Non-synonymous Met-Thr 35 TODO by cluster
N/A Q30201 Non-synonymous Gly-Asp 43 TODO Not validated
rs28934889 NP_620578 Non-synonymous Val-Met 53 TODO 1000Genome,freq,cluster
rs111033557 NP_620578 Non-synonymous Val-Met 59 TODO by cluster
rs1799945 NP_000401 Non-synonymous His-Asp 63 TODO 1000Genome,freq,cluster
rs1800730 NP_620575 Non-synonymous Ser-Cys 65 TODO 1000Genome,freq,cluster
N/A Q30201 Non-synonymous Arg-Cys 66 TODO Not validated
N/A B990874 Non-synonymous Arg-Glu 66 TODO Not validated
rs139523708 NP_000401 Non-synonymous Arg-His 67 TODO Not validated
rs28934597 NP_620578 Non-synonymous Gly-Arg 93 TODO by cluster
N/A B990874 Non-synonymous Val-Ala 100 TODO Not validated
N/A A001949 Non-synonymous Trp-Ala 103 TODO Not validated
rs28934596 NP_620578 Non-synonymous Ile-Thr 105 TODO by cluster
N/A NP_000401 Non-synonymous Met-Thr 106 TODO Not validated
rs28934595 NP_000401 Non-synonymous Gln-His 127 TODO by cluster
rs149662565 NP_000401 Non-synonymous Pro-Thr 160 TODO Not validated
rs145475682 NP_620575 Non-synonymous Ala-Ser 162 TODO by freq
N/A B990874 Non-synonymous Trp-Ala 163 TODO Not validated
rs144170531 NP_620576 Non-synonymous Lys-Glu 166 TODO by freq
rs146519482 NP_000401 Non-synonymous Glu-Gln 168 TODO Not validated
N/A Q30201 Non-synonymous Ala-Val 176 TODO Not validated
N/A NP_000401 Non-synonymous Leu-Pro 183 TODO Not validated
N/A B990874 Non-synonymous Pro-Val 188 TODO Not validated
rs4986950 NP_620576 Non-synonymous Thr-Ile 217 TODO by cluster,freq
N/A Q30201 Non-synonymous Arg-Gly 224 TODO Not validated
rs144797937 NP_620579 Non-synonymous Arg-Trp 224 TODO by freq
rs62625346 NP_620572 Non-synonymous Arg-Gln 224 TODO by cluster,freq
N/A Q30201 Non-synonymous Tyr-His 230 TODO Not validated
rs140515012 NP_000401 Non-synonymous Pro-Ala 245 TODO Not validated
N/A Q30201 Non-synonymous Ala-Thr 248 TODO Not validated
rs150402693 NP_000401 Non-synonymous Phe-Leu 251 TODO Not validated
rs138176635 NP_000401 Non-synonymous Glu-Gly 252 TODO Not validated
N/A Q30201 Non-synonymous Val-Ala 256 TODO Not validated
rs143846467 NP_000401 Non-synonymous Asn-Ser 259 TODO Not validated
N/A Q30201 Non-synonymous Gly-Glu 275 TODO Not validated
rs140080192 NP_620576 Non-synonymous Glu-Lys 277 TODO 1000Genome,freq,cluster
rs1800562 NP_620575 Non-synonymous Cys-Tyr 282 TODO 1000Genome,freq,cluster
rs111033563 NP_620573 Non-synonymous Gln-Pro 283 TODO by cluster
rs143175221 NP_000401 Non-synonymous Val-Ala 295 TODO by freq
N/A Q30201 Non-synonymous Ser-Arg 311 TODO Not validated
rs147519426 NP_000401 Non-synonymous Val-Gly 315 TODO by freq
rs141229562 NP_000401 Non-synonymous Val-Ile 318 TODO Not validated
rs150716212 NP_000401 Non-synonymous Ile-Thr 322 TODO Not validated
rs138993448 NP_000401 Non-synonymous Ile-Thr 327 TODO Not validated
rs111033558 NP_620578 Non-synonymous Arg-Met 330 TODO by cluster
N/A Q30201 Non-synonymous Met-Val 339 TODO Not validated
rs146508927 NP_000401 Non-synonymous Arg-His 347 TODO by freq
TODO: description.

</figtable>