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The script can be found in <code>/mnt/home/student/schillerl/MasterPractical/task2/create_dataset.py</code>. The datasets are located at <code>/mnt/home/student/schillerl/MasterPractical/task2/datasets/</code>.

* The PDB files used as input for DSSP are located at <code>/mnt/home/student/schillerl/MasterPractical/task3/pdb_structures/</code>. If there were more than one P ...d the following Python script (which is located at <code>/mnt/home/student/schillerl/MasterPractical/task3/dssp/parse_dssp_output.py</code>):

The models are stored in <code>/mnt/home/student/schillerl/MasterPractical/task4/hhmakemodel/</code>. LGA results can be found in <code>/mnt/home/student/schillerl/MasterPractical/task4/LGA/</code>.

...token=TOKEN this server]. The models are stored in <code>/mnt/home/student/schillerl/MasterPractical/task5/Swissmodel/</code>. ...the iTasser template library. Models are stored in <code>/mnt/home/student/schillerl/MasterPractical/task5/iTasser/</code>.

...t output was analyzed with the R script located at <code>/mnt/home/student/schillerl/MasterPractical/task6/analyse_correlated_mutations.r</code>.

source("/mnt/home/student/schillerl/MasterPractical/format_to_wiki_table.r")

...file with the following Python script (located at <code>/mnt/home/student/schillerl/MasterPractical/task8/extract_aa_frequency.py</code>):

...the sequence with the following script (located at <code>/mnt/home/student/schillerl/MasterPractical/task9/create_mutated_sequences.py</code>): The mutat structures are located at <code>/mnt/home/student/schillerl/MasterPractical/task9/scwrl/</code>.