Sequence-based predictions GLA diagrams

From Bioinformatikpedia

by Benjamin Drexler and Fabian Grandke This page contains additional information (especially diagrams and graphics) to provide a better overview on the main page.

Secondary structure prediction

PSIPRED

GLA Psipred.png

Comparison with DSSP

GLA DSSP Comp.png File:GLA DSSP Comp.pdf

Prediction of disordered regions

DISOPRED

GLA Diso graph.png

POODLE

POODLE-S: Missing residues

GLA Poodle s missing.png

POODLE-S: High B-Factor residues

GLA Poodle s high b.png

IUPRED

Short Disorder

GLA Iupred Short.png

Long Disorder

GLA Iupred Long.png

META-Disorder

GLA Meta disorder.png

Prediction of transmembrane alpha-helices and signal peptides

TMHMM

GLA

Fabry disease TMHMM GLA.png

BACR_HALSA

Fabry disease TMHMM BACR HALSA.png

RET4_HUMAN

Fabry disease TMHMM RET4 HUMAN.png

INSL5_HUMAN

Fabry disease TMHMM INSL5 HUMAN.png

LAMP1_HUMAN

Fabry disease TMHMM LAMP1 HUMAN.png

A4_HUMAN

Fabry disease TMHMM A4 HUMAN.png

Phobius and PolyPhobius

http://phobius.sbc.su.se/

GLA

Phobius

GLA Phob gla.png


PolyPhobius

GLA Poly gla.png


BACR_HALSA

Phobius

GLA Phob barc.png


PolyPhobius

GLA Poly barc.png


RET4_HUMAN

Phobius

GLA Phob ret4.png


PolyPhobius

Poly ret4.png

INSL5_HUMAN

Phobius

GLA Phob insl5.png


PolyPhobius

Poly insl5.png


LAMP1_HUMAN

Phobius

GLA Phob lamp1.png

PolyPhobius

GLA Poly lamp1.png


A4_HUMAN

Phobius

GLA Phob a4.png

PolyPhobius

GLA Poly a4.png

OCTOPUS and SPOCTOPUS

http://octopus.cbr.su.se/index.php

GLA

Octopus

GLA Octo gla.png

Spoctopus

GLA Spocto gla.png

BACR_HALSA

Octopus

GLA Octo bacr.png

Spoctopus

GLA Spocto bacr.png

RET4_HUMAN

Octopus

GLA Octo ret4.png

Spoctopus

GLA Spocto ret4.png

INSL5_HUMAN

Octopus

GLA Octo insl5.png

Spoctopus

GLA Spocto insl5.png

LAMP1_HUMAN

Octopus

GLA Octo lamp1.png

Spoctopus

GLA Spocto lamp1.png

A4_HUMAN

Octopus

Octo a4.png

Spoctopus

GLA Spocto a4.png

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