Difference between revisions of "Task 9: MSUD - Normal Mode Analysis"

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= WEBnm@ =
 
= WEBnm@ =
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WEBnm@ provides users with a number of different for Normal Mode Analysis of their protein of interest.
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The deformation energies are energies associated with each node and are inversly related to the amplitude of the protein motion and thereby gives a general idea which motion is the strongest.
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<table>
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<tr>
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<th>Mode Index</th>
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<th>Deformation Energy</th>
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<th>Mode Index</th>
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<th>Deformation Energy</th>
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</tr>
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<tr class="row-a">
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<td>7</td>
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<td>288.99</td>
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<td>14</td>
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<td>2957.24</td>
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</tr>
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<tr class="row-b">
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<td>8</td>
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<td>407.20</td>
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<td>15</td>
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<td>2715.91</td>
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</tr>
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<tr class="row-a">
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<td>9</td>
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<td>589.17</td>
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<td>16</td>
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<td>3291.75</td>
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</tr>
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<tr class="row-b">
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<td>10</td>
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<td>752.78</td>
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<td>17</td>
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<td>3543.09</td>
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</tr>
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<tr class="row-a">
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<td>11</td>
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<td>842.47</td>
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<td>18</td>
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<td>3927.68</td>
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</tr>
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<tr class="row-b">
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<td>12</td>
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<td>994.58</td>
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<td>19</td>
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<td>4115.63</td>
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</tr>
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<tr class="row-a">
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<td>13</td>
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<td>1727.81</td>
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<td>20</td>
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<td>4950.67</td>
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</tr>
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</table>
   
 
= ElNemo =
 
= ElNemo =

Revision as of 20:02, 4 July 2012

WEBnm@

WEBnm@ provides users with a number of different for Normal Mode Analysis of their protein of interest.

The deformation energies are energies associated with each node and are inversly related to the amplitude of the protein motion and thereby gives a general idea which motion is the strongest.


Mode Index Deformation Energy Mode Index Deformation Energy
7 288.99 14 2957.24
8 407.20 15 2715.91
9 589.17 16 3291.75
10 752.78 17 3543.09
11 842.47 18 3927.68
12 994.58 19 4115.63
13 1727.81 20 4950.67

ElNemo

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