Difference between revisions of "Talk:Task 6 - Protein structure prediction from evolutionary sequence variation"

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Hi all,
 
Hi all,
 
my problem is that for both pfam domains [http://pfam.sanger.ac.uk/family/PF07654#tabview=tab0] [http://pfam.sanger.ac.uk/family/PF00129] of our protein [http://www.uniprot.org/uniprot/Q30201|HFE_HUMAN], EVcouplings and EVfold stop at the mapping step without providing further details about the problem.
 
my problem is that for both pfam domains [http://pfam.sanger.ac.uk/family/PF07654#tabview=tab0] [http://pfam.sanger.ac.uk/family/PF00129] of our protein [http://www.uniprot.org/uniprot/Q30201|HFE_HUMAN], EVcouplings and EVfold stop at the mapping step without providing further details about the problem.
*[http://evfold.org/evfold-web/status.do?job_id=31de4d62-1f7e-46c0-a47d-2d93c1e1e4aa|EVcouplings Job MHC]
+
*[http://evfold.org/evfold-web/status.do?job_id=31de4d62-1f7e-46c0-a47d-2d93c1e1e4aa||EVcouplings Job MHC]
*[http://evfold.org/evfold-web/status.do?job_id=6a4ba64c-0ec3-4cdc-978c-a4454d717628|EVfold Job MHC]
+
*[http://evfold.org/evfold-web/status.do?job_id=6a4ba64c-0ec3-4cdc-978c-a4454d717628||EVfold Job MHC]
   
 
EVcouplings input for the MHC domain was:
 
EVcouplings input for the MHC domain was:

Revision as of 23:22, 14 August 2013

Hi all, my problem is that for both pfam domains [1] [2] of our protein [3], EVcouplings and EVfold stop at the mapping step without providing further details about the problem.

EVcouplings input for the MHC domain was:

SHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVFYDHESRRVEPRTPWVSSRIsSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQVILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARqNRAYLERDCPAQLQQLLELGRG
known structure: 1A6Z