Difference between revisions of "Talk:Task 6 - Protein structure prediction from evolutionary sequence variation"
From Bioinformatikpedia
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Hi all, |
Hi all, |
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my problem is that for both pfam domains [http://pfam.sanger.ac.uk/family/PF07654#tabview=tab0] [http://pfam.sanger.ac.uk/family/PF00129] of our protein [http://www.uniprot.org/uniprot/Q30201|HFE_HUMAN], EVcouplings and EVfold stop at the mapping step without providing further details about the problem. |
my problem is that for both pfam domains [http://pfam.sanger.ac.uk/family/PF07654#tabview=tab0] [http://pfam.sanger.ac.uk/family/PF00129] of our protein [http://www.uniprot.org/uniprot/Q30201|HFE_HUMAN], EVcouplings and EVfold stop at the mapping step without providing further details about the problem. |
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− | *[http://evfold.org/evfold-web/status.do?job_id=31de4d62-1f7e-46c0-a47d-2d93c1e1e4aa|EVcouplings Job MHC] |
+ | *[http://evfold.org/evfold-web/status.do?job_id=31de4d62-1f7e-46c0-a47d-2d93c1e1e4aa||EVcouplings Job MHC] |
− | *[http://evfold.org/evfold-web/status.do?job_id=6a4ba64c-0ec3-4cdc-978c-a4454d717628|EVfold Job MHC] |
+ | *[http://evfold.org/evfold-web/status.do?job_id=6a4ba64c-0ec3-4cdc-978c-a4454d717628||EVfold Job MHC] |
EVcouplings input for the MHC domain was: |
EVcouplings input for the MHC domain was: |
Revision as of 23:22, 14 August 2013
Hi all, my problem is that for both pfam domains [1] [2] of our protein [3], EVcouplings and EVfold stop at the mapping step without providing further details about the problem.
EVcouplings input for the MHC domain was:
SHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVFYDHESRRVEPRTPWVSSRIsSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQVILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARqNRAYLERDCPAQLQQLLELGRG known structure: 1A6Z