Difference between revisions of "TSD Modeller 3gh5 Edited Alignment"

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(Created page with "<source lang="bash"> P1;3GH5 structureX:../../input/3GH5.pdb: -16 :A:+507 :A:MOL_ID 1; MOLECULE BETA-HEXOSAMINIDASE; CHAIN A; SYNONYM HEX1; EC 3.2.1.52; ENGINEERED YES:MOL_…")
 
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<source lang="bash">
 
P1;3GH5
 
structureX:../../input/3GH5.pdb: -16 :A:+507 :A:MOL_ID 1; MOLECULE BETA-HEXOSAMINIDASE; CHAIN A; SYNONYM HEX1; EC 3.2.1.52; ENGINEERED YES:MOL_ID 1; ORGANISM_SCIENTIFIC PAENIBACILLUS SP.; ORGANISM_TAXID 58172; STRAIN TS12; GENE HEX1; EXPRESSION_SYSTEM ESCHERICHIA COLI BL21(DE3); EXPRESSION_SYSTEM_TAXID 469008; EXPRESSION_SYSTEM_STRAIN BL21(DE3); EXPRESSION_SYSTEM_VECTOR_TYPE PLASMID; EXPRESSION_SYSTEM_PLASMID PET28C: 1.60: 0.15
 
HHHHSSGLVPRGSHMASMSQPSILPKPVSYTVGSGQFVLTKNASIFVAGNNVGETDELFNIGQALAKKLNAS
 
TG-------YTISVVKSNQPTAGSIYLTTVGGN---AALGNEGYDLITTSNQVTLTANKPEGVFRGNQTLLQ
 
LLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQIDLASQYKINKFHMHLSDDQ
 
GWRIEIKSWPDLIEIGSKGQVGGGPGGYYTQEQFKDIVSYAAERYIEVIPEIDMPGHTNAALASYGELNPDG
 
KRKAMRTDTAVGYSTLMPRAEITYQFVEDVISELAAISPSPYIHLGGDESNAT----------------SAA
 
DYDYFFGRVTAIANSY----GKKVVGWDPS-DTSSGATSDSVLQNWTCSASTGTAAKAKGMKVIVSPANAYL
 
DMKYYSDS-PIGLQWRGF-VNTNRAYNWDPTDCIKGANIYGVESTLWTETFVTQDHLDYMLYPKLLSNAEVG
 
WTARGDRNWDDFKERLIEHTPRLQNKGIKFFADPIV---------*
 
>P1;P06865
 
sequence:: : : : :::-1.00:-1.00
 
MTSSRLWFSLLLAAAFAGRATALWPWPQNFQTSDQRYVLYPNNFQFQYDVSSAAQPGCSVLDEAFQRYRDLL
 
FGSGSWPRPYLTGKRHTLEKNVLVVSVVTPGCNQLPTLESVENYTLTINDDQCLLLSETVWGALRGLETFSQ
 
LVWKSAEGT-------FFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDP
 
SFPYESFTFPELMRKGSYNPVTH----IYTAQDVKEVIEYARLRGIRVLAEFDTPGHTLSWGPGIPGLLTPC
 
YSGSEPSGT---FGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDFTCWKSNPEIQDFMRKKGFGE
 
DFKQLESFYIQTLLDIVSSYGKGYVVWQEVFDNKVKIQPDTIIQVWREDIPVNYMKELE--LVTKAGFRALL
 
SAPWYLNRISYGPDWKDFYIVEPLAFEGTPE---QKALVIGGEACMWGE-YVDNTNLVPRLWPRAGAVAERL
 
WSNKLTSDLTFAYERLSHFRCELLRRGVQAQPLNVGFCEQEFEQT*
 
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Latest revision as of 13:37, 2 June 2012