Supplementary data normal mode glucocerebrosidase

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Revision as of 09:31, 18 August 2011 by Brunners (talk | contribs) (Nomad-Ref)

This site provides additional data obtained in the normal mode analysis of glucocerebrosidase with different tools.


Anisotropic Network Model

Mode 6 Mode 7 Mode 8 Mode 9 Mode 10
Figure 26: Normal Mode 6 calculated with ANM
Figure 27: Normal Mode 7 calculated with ANM
Figure 28: Normal Mode 8 calculated with ANM
Figure 29: Normal Mode 9 calculated with ANM
Figure 30: Normal Mode 10 calculated with ANM
Inter Distance Analysis
Figure 31a: Distance Matrix

Figure 31b: Deformation Energy

Overall energy: 107191.169783064
Figure 32a: Distance Matrix

Figure 32b: Deformation Energy

Overall energy: 112430.078797944
Figure 33a: Distance Matrix

Figure 33b: Deformation Energy

Overall energy: 138939.176046648
Figure 34a: Distance Matrix

Figure 34b: Deformation Energy

Overall energy: 156195.358655472
Figure 35a: Distance Matrix

Figure 35b: Deformation Energy

Overall energy: 154660.33882932
B-factors/mode fluctuations
Figure 36: B-factors/mode fluctuations
Figure 37: B-factors/mode fluctuations
Figure 38: B-factors/mode fluctuations
Figure 39: B-factors/mode fluctuations
Figure 40: B-factors/mode fluctuations

Nomad-Ref

Mode 1 Mode 2 Mode 3 Mode 4 Mode 5 Mode 6
Figure 45a

Figure 45b

Figure 45c
Figure 46a

Figure 46b

Figure 46c
Figure 47a

Figure 47b

Figure 47c
Figure 48a

Figure 48b

Figure 48c
Figure 49a

Figure 49b

Figure 49c
Figure 50a

Figure 50b

Figure 50c