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  1. .snapfunrc
  2. 1OGS EVcouplings Configuration DI
  3. ARSA search protocol
  4. ARS A
  5. ARS A Sequence alignments
  6. ASPA
  7. ASPA Homology Modelling
  8. ASPA Mapping SNPs
  9. ASPA Molecular Dynamics Simulation
  10. ASPA Molecular Dynamics Simulation Analysis
  11. ASPA Normal Mode Analysis
  12. ASPA Sequence Alignments
  13. ASPA Sequence Based Mutation Analysis
  14. ASPA Sequence Based Predictions
  15. ASPA Structure Based Mutation Analysis
  16. Ala305glu
  17. All-blast.sh
  18. All-hhblits.sh
  19. All-psiblast.sh
  20. AllBio Forum
  21. Animated Gifs
  22. Automated Evaluation of Homoloy Models
  23. BCKDHA
  24. BCKDHB
  25. BLAST
  26. BLOSUM62 matrix
  27. Beta-hexosaminidase subunit alpha
  28. Blast results Mamalian search
  29. Build mutation Script
  30. C264W
  31. CD task10 protocol
  32. CD task2 protocol
  33. CD task4 protocol
  34. CD task5 protocol
  35. CD task6 protocol
  36. CD task7 protocol
  37. CD task8 protocol
  38. CD task9 protocol
  39. Canavan Disease
  40. Canavan Disease: Task 02 - Alignments
  41. Canavan Disease: Task 02 - Journal
  42. Canavan Disease: Task 02 - Supplement
  43. Canavan Disease: Task 03 - Journal
  44. Canavan Disease: Task 03 - Sequence-based Predictions
  45. Canavan Disease: Task 04 - Journal
  46. Canavan Disease: Task 04 - Structural Alignments
  47. Canavan Disease: Task 05 - Homology Modelling
  48. Canavan Disease: Task 06 - Protein Structure Prediction
  49. Canavan Disease: Task 07 - Journal
  50. Canavan Disease: Task 07 - Researching SNPs
  51. Canavan Disease: Task 07 - Supplement
  52. Canavan Disease: Task 08 - Sequence-based Mutation Analysis
  53. Canavan Disease: Task 08 - Supplement
  54. Canavan Disease: Task 09 - Structure-based Mutation Analysis
  55. Canavan Disease: Task 09 - Supplement
  56. Canavan Disease: Task 10 - Normal Mode Analysis
  57. Canavan Disease: Task 11 - Molecular Dynamics Simulation
  58. Canavan Disease 2011
  59. Canavan Disease 2012
  60. Canavan Task 10 - Molecular Dynamics Simulations
  61. Canavan Task 2 - Sequence alignments
  62. Canavan Task 3 - Sequence-based predictions
  63. Canavan Task 4 - Homology based structure predictions
  64. Canavan Task 6 - Sequence-based mutation analysis
  65. Canavan Task 7 - Structure-based mutation analysis
  66. Canavan Task 8 - Molecular Dynamics Simulations
  67. Canavan Task 9 - Normal Mode Analysis
  68. Canavans Disease
  69. ClustalW Above 60
  70. ClustalW Below 30
  71. ClustalW whole
  72. CompareCath.py
  73. Compiled list of SNPS
  74. Cys152arg
  75. DBT
  76. DLD
  77. DbSNP Silent Mutations Parser
  78. Devide psiblast out.pl
  79. Disease list
  80. Disease list 2011
  81. Disopred
  82. Disorder general
  83. Disorder gerneral
  84. Dssp
  85. Example/Template
  86. Example sequence
  87. F409C
  88. FASTA
  89. Fabian Grandke
  90. Fabry:Alpha-galactosidase sequence
  91. Fabry:Annotated SNPs
  92. Fabry:Mapping point mutations/HGMD
  93. Fabry:Mapping point mutations/OMIM data
  94. Fabry:Mapping point mutations/SNPdbe data
  95. Fabry:Mapping point mutations/SNPedia data
  96. Fabry:Normal mode analysis/Deformation Energies
  97. Fabry:Sequence alignments (sequence searches and multiple alignments):Results
  98. Fabry:Structure-based mutation analysis/FoldXtables
  99. Fabry:Structure-based mutation analysis/MinimiseTables
  100. Fabry Disease Mutation Analysis Sequence PSSM
  101. Fabry Disease mutation analysis sequence msa sequences
  102. Fabry Disease sequence-based prediction of tm-helices and signal peptides A4 HUMAN
  103. Fabry Disease sequence-based prediction of tm-helices and signal peptides BARC HALSA
  104. Fabry Disease sequence-based prediction of tm-helices and signal peptides GLA
  105. Fabry Disease sequence-based prediction of tm-helices and signal peptides INSL5 HUMAN
  106. Fabry Disease sequence-based prediction of tm-helices and signal peptides LAMP1 HUMAN
  107. Fabry Disease sequence-based prediction of tm-helices and signal peptides RET4 HUMAN
  108. Fabry Disease swiss 1KTB graphics
  109. Fabry Disease swiss 3CC1 graphics
  110. Fabry Disease swiss 3HG3 graphics
  111. FoldX Difference Mutant/Wildtype
  112. Foldx hexa
  113. Format to wiki table.r
  114. G249S
  115. GO Terms A4 HUMAN
  116. GO Terms BACR HALSA
  117. GO Terms HEXA HUMAN
  118. GO Terms INSL5 HUMAN
  119. GO Terms LAMP1 HUMAN
  120. GO Terms RET4 HUMAN
  121. GO annotation of the proteins
  122. GO terms general
  123. Gaucher Disease
  124. Gaucher Disease: Task 02 - Alignments
  125. Gaucher Disease: Task 02 - Lab Journal
  126. Gaucher Disease: Task 03 - Lab Journal
  127. Gaucher Disease: Task 03 - Sequence-based predictions
  128. Gaucher Disease: Task 04 - Lab Journal
  129. Gaucher Disease: Task 04 - Structural Alignment
  130. Gaucher Disease: Task 05 - Homology Modelling
  131. Gaucher Disease: Task 05 - Lab Journal
  132. Gaucher Disease: Task 06 - Lab Journal
  133. Gaucher Disease: Task 06 - Protein structure prediction from evolutionary sequence variation
  134. Gaucher Disease: Task 07 - Research SNPs
  135. Gaucher Disease: Task 08 - LabJournal
  136. Gaucher Disease: Task 08 - Sequence-based mutation analysis
  137. Gaucher Disease: Task 09 - Lab Journal
  138. Gaucher Disease: Task 09 - Lab Journal: run minimise.sh
  139. Gaucher Disease: Task 09 - Structure-based mutation analysis
  140. Gaucher Disease: Task 10 - Lab Journal
  141. Gaucher Disease: Task 10 - Normal mode analysis
  142. Gaucher Disease - Task 06 - Lab Journal
  143. Gaucher Disease 2012
  144. Gaucher Task05 Protocol
  145. Gaucher Task06 Protocol
  146. Gaucher Task07 Protocol
  147. Gaucher Task09 Protocol
  148. Gaucher Task10 Protocol
  149. Gaucher dbSNP Deletions
  150. Gaucher dbSNP Missense
  151. Gaucher dbSNP Synonymous
  152. Gaucher hgmd mutations
  153. Glu285ala
  154. Glucocerebrosidase disease causing mutations
  155. Glucocerebrosidase neutral mutations
  156. Go annotations here
  157. HEXA Reference sequence
  158. HFE HUMAN NM
  159. HHSearch
  160. Hemo Task7 Minimise Table
  161. Hemo Task7 SCWRL FoldX Table
  162. Hemo seq based pred
  163. Hemochromatosis
  164. Hemochromatosis: Sequence based predictions
  165. Hemochromatosis 2012
  166. Hemochromatosis ALL SNP TABLE
  167. Hemochromatosis DBSNP SNP TABLE
  168. Hemochromatosis HGMD SNP TABLE
  169. Hemochromatosis Normal modes
  170. Hemochromatosis PSSM Matrix
  171. Hemochromatosis SNP Mapping MSA
  172. Hemochromatosis SNPdbe SNP TABLE
  173. Hemochromatosis SS Alignments
  174. Hemochromatosis gromacs energy table pictures
  175. Hemochromatosis gromacs mdp
  176. Hereditary hemochromatosis
  177. Hex A Reference sequence
  178. Hhr2tsv
  179. Homology-modelling HEXA
  180. Homology-modelling HEXA/3bc9.pir
  181. Homology-modelling HEXA/3cui.pir
  182. Homology-modelling HEXA/3lut.pir,
  183. Homology-modelling HEXA/hh search output
  184. Homology-modelling HEXA/swissmodel 3CUI
  185. Homology-modelling HEXA/swissmodel 3LUT
  186. Homology-modelling HEXA/swissmodel ali
  187. Homology Based Structure Predictions Hemochromatosis
  188. Homology Based Structure Predictions Hemochromatosis Alignments
  189. Homology based Structure prediction protocol BCKDHA
  190. Homology based structure predictions BCKDHA
  191. Homology modelling Gaucher Disease
  192. Homology modelling TSD
  193. How to search dbSNP
  194. I326T
  195. Imm ev hotspots
  196. Isoform CRA a
  197. Isoform CRA b
  198. Iupred
  199. Jpred
  200. Lab Journal -Task 4 (PAH)
  201. Lab Journal - Task 10 (PAH)
  202. Lab Journal - Task 7 (PAH)
  203. Lab Journal Hemochromatosis Task9
  204. Lab Journal Task 3 Hemo
  205. Lab Journal of Task 3 (MSUD)
  206. Lab Journal of Task 4 (MSUD)
  207. Lab Journal of Task 5 (MSUD)
  208. Lab journal
  209. Lab journal Task 7
  210. Lab journal task 2
  211. Lab journal task 4
  212. Lab journal task 5
  213. Lab journal task 8
  214. Labjournal NMA-Hemochromatosis
  215. List of known Hex A mutations
  216. M82L
  217. MAFFT 30
  218. MAFFT 360
  219. MAFFT 60
  220. MAFFT whole
  221. MDP condiguration (PKU)
  222. MD Mutation436
  223. MD Mutation485
  224. MD WildType
  225. MD WildeType
  226. MD simulation analysis TSD
  227. MD simulation analysis TSD Journal
  228. MSUD Q80E
  229. MSUD Task 9 Protocoll
  230. MSUP-task7-journal
  231. Main Page
  232. MapleSyrupDisease disease causing mutations
  233. Maple Syrup Urine Disease
  234. Maple Syrup Urine Disease 2012
  235. Maple syrup urine disease 2011
  236. Mapping SNPs BCKDHA
  237. Mapping SNPs HEXA
  238. Mapping SNPs HEXA/DETAIL
  239. Metachromatic leukodistrophy
  240. Missense nonsense CFTR
  241. Missense nonsense HFE
  242. Modeller.py
  243. Modeller protocol BCKDHA
  244. Modeller protokoll BCKDHA
  245. Molecular Dynamics Analysis BCKDHA
  246. Molecular Dynamics Simulations Analysis Gaucher Disease
  247. Molecular Dynamics Simulations Analysis Hemochromatosis
  248. Molecular Dynamics Simulations BCKDHA
  249. Molecular Dynamics Simulations Gaucher Disease
  250. Molecular Dynamics Simulations Gaucher Disease Scripts
  251. Molecular Dynamics Simulations HEXA
  252. Molecular Dynamics Simulations Hemochromatosis
  253. Molecular Dynamics Simulations TSD
  254. Molecular Dynamics Simulations TSD Journal
  255. Msa-conservation.py
  256. Multiple Sequence Alignment: ClustalW - set 1
  257. Multiple Sequence Alignment: ClustalW - set 2
  258. Multiple Sequence Alignment: ClustalW - set 3
  259. Multiple Sequence Alignment: Espresso - set 1
  260. Multiple Sequence Alignment: Muscle - set 1
  261. Multiple Sequence Alignment: Muscle - set 2
  262. Multiple Sequence Alignment: Muscle - set 3
  263. Multiple Sequence Alignment: T-Coffee - set 1
  264. Multiple Sequence Alignment: T-Coffee - set 2
  265. Multiple Sequence Alignment: T-Coffee - set 3
  266. MutEn.pl
  267. Mutation Minimization Plots (PKU)
  268. Normal Mode Analysis BCKDHA
  269. Normal Mode Analysis Hemochromatosis
  270. Normal mode analysis GLA supplementary
  271. Normal mode analysis Gaucher Disease
  272. Normal mode analysis HEXA
  273. Normal mode analysis TSD
  274. Normal mode analysis TSD Journal
  275. Overlap between all databases (HGMD free)
  276. P01112 EVcouplings Configuration DI
  277. P01112 EVcouplings Configuration PLM
  278. P01112 EVfold Configuration DI
  279. P01112 EVfold Configuration PLM
  280. PAH G312D
  281. PAH I65T
  282. PAH P275S
  283. PAH P281L
  284. PAH R158Q
  285. PAH R261Q
  286. PAH R408W
  287. PAH R71H
  288. PAH Structure
  289. PAH T266A
  290. PAH T278N
  291. PSI-BLAST
  292. PSIBlasttrainer.pl
  293. PSSM
  294. PSSM of close homologous sequences
  295. Parse output.pl
  296. Pearson cc.r (Gaucher Disease)
  297. Phenylalanine hydroxylase reference
  298. Phenylalanine hydroxylase reference mRNA
  299. Phenylketonuria/Task2/Scripts
  300. Phenylketonuria/Task2 Scripts
  301. Phenylketonuria/Task3/Scripts
  302. Phenylketonuria/Task6 Scripts
  303. Phenylketonuria 2011
  304. Polyphobius.pl
  305. Poodle
  306. Prediction of Disordered Regions
  307. Prediction of transmembrane alpha-helices and signal peptides A4 HUMAN
  308. Prediction of transmembrane alpha-helices and signal peptides BACR HALSA
  309. Prediction of transmembrane alpha-helices and signal peptides HEXA HUMAN
  310. Prediction of transmembrane alpha-helices and signal peptides INSL5 HUMAN
  311. Prediction of transmembrane alpha-helices and signal peptides LAMP1 HUMAN
  312. Prediction of transmembrane alpha-helices and signal peptides RET4 HUMAN
  313. ProtFun2.2 output
  314. Protein Structure and Function Analysis (SS 2011)
  315. Protein Structure and Function Analysis (SS 2013)
  316. Protein Structure and Function Analysis (version: SS 2011)
  317. Protein Structure and Function Analysis (version: SS 2012)
  318. Protocol
  319. Protocol-msud-task5 protocol
  320. Protocol BCKDHA MD
  321. Protocol search
  322. Psipred
  323. Q125E
  324. QMEAN score information BCKDHA
  325. R265W
  326. Ras DI Score Configuration
  327. Ras PLM Score Configuration
  328. Reference Alignment BCKDHA
  329. Reference Sequence
  330. Reference Sequence (pdb)
  331. Reference Sequence Aspartoacyclase
  332. Reference Sequence BCKDHA
  333. Reference amino acid sequence of Glucocerebrosidase
  334. Reference mRNA of Glucocerebrosidase
  335. Reference nucleotide sequence of Glucocerebrosidase
  336. Reference sequence
  337. Reference sequence (uniprot)
  338. Researching And Mapping Point Mutations Hemochromatosis
  339. Researching SNPs Gaucher Disease
  340. Researching SNPs TSD
  341. Researching SNPs TSD Journal
  342. Researching and mapping point mutations TSD Journal
  343. Resource data
  344. Resource discussion
  345. Resource language
  346. Resource literature
  347. Resource software
  348. Resource wiki
  349. Rs1054374
  350. Rs1054374 SNAP
  351. Rs121907967
  352. Rs121907967 SNAP
  353. Rs121907968
  354. Rs121907968 SNAP
  355. Rs121907974
  356. Rs121907974 SNAP
  357. Rs121907979
  358. Rs121907979 SNAP
  359. Rs121907982
  360. Rs121907982 SNAP
  361. Rs1800430
  362. Rs1800430 SNAP
  363. Rs1800431
  364. Rs4777505
  365. Rs4777505 SNAP
  366. Rs61731240
  367. Rs61731240 SNAP
  368. Rs61747114
  369. Rs61747114 SNAP
  370. Run-blast.pl
  371. Run.pl
  372. Run MD HEXA
  373. Runscript BCKDHA
  374. Runscript for foldx
  375. SNPdbe conservation score (PKU)
  376. SNPs for Hema
  377. Scrip pdb distance check.py
  378. Script calc hotspot.py
  379. Script distance check.py
  380. Script rank contacts.py
  381. Secondary Structure Prediction
  382. Secondary Structure Prediction BCKDHA
  383. Secstr general
  384. Seq.-based mut. analysis HEXA
  385. Sequence-Based Mutation Analysis Hemochromatosis
  386. Sequence-Based Predictions Hemochromatosis
  387. Sequence-based analyses Gaucher Disease
  388. Sequence-based mutation analysis BCKDHA
  389. Sequence-based mutation analysis BCKDHA protocol
  390. Sequence-based mutation analysis Gaucher Disease
  391. Sequence-based mutation analysis HEXA
  392. Sequence-based mutation analysis HEXA/Mutation Summary
  393. Sequence-based mutation analysis HEXA/rs4777505 SNAP
  394. Sequence-based mutation analysis TSD
  395. Sequence-based mutation analysis TSD Journal
  396. Sequence-based predictions HEXA
  397. Sequence-based predictions Protocol TSD
  398. Sequence-based predictions TSD
  399. Sequence Alignments
  400. Sequence Alignments BCKDHA
  401. Sequence Alignments Gaucher Disease
  402. Sequence Alignments HEXA
  403. Sequence Alignments Hemochromatosis
  404. Sequence Alignments Protocol TSD
  405. Sequence Alignments TSD
  406. Sift probability HFE
  407. SignalP scores TSD
  408. Solution HFE SNPs
  409. Structure-Based Mutation Analysis Hemochromatosis
  410. Structure-based mutation analysis BCKDHA
  411. Structure-based mutation analysis Gaucher Disease
  412. Structure-based mutation analysis HEXA
  413. Structure-based mutation analysis TSD
  414. Structure-based mutation analysis TSD Journal
  415. Structure pdb
  416. Structures for P00439 in PDB
  417. Supplementary data normal mode glucocerebrosidase
  418. Swismsmodel 2gk1 alignment
  419. Swissmodel 1o7a alignment
  420. Swissmodel 2gjx alignment
  421. TSD Homology modelling protocol
  422. TSD Modeller 1o7a 2D
  423. TSD Modeller 1o7a Simple
  424. TSD Modeller 2gk1 2D
  425. TSD Modeller 2gk1 Simple
  426. TSD Modeller 3gh5 2D
  427. TSD Modeller 3gh5 Edited Alignment
  428. TSD Modeller 3gh5 Simple
  429. TSD NM 000520.3 NM 000520.4 NW
  430. TSD PolyPhen2 Full Ouput
  431. TSD SIFT Scaled Probailities
  432. TSD createMap.pl
  433. TSD synonymous SNPs from dbSNP
  434. Table Templates
  435. Task04 protocol
  436. Task10 Hemochromatosis Protocol
  437. Task2 Hemochromatosis Protocol
  438. Task3 Hemochromatosis Protocol
  439. Task3 protocol
  440. Task3 protocoll
  441. Task4 Hemochromatosis Protocol
  442. Task5 Hemochromatosis Protocol
  443. Task6-MSUP-journal
  444. Task6 Hemochromatosis Protocol
  445. Task7 Hemochromatosis Protocol
  446. Task8 Hemochromatosis Protocol
  447. Task9 Hemochromatosis Protocol
  448. Task 10: Molecular Dynamics Analysis
  449. Task 10 (MSUD)
  450. Task 10 - Molecular Dynamics Simulations
  451. Task 10 - Molecular Dynamics Simulations 2011
  452. Task 10 - Normal Mode Analysis
  453. Task 10 Lab Journal (MSUD)
  454. Task 11 - Molecular Dynamics Simulation
  455. Task 1: Collect information on the individual disease
  456. Task 2: Alignments
  457. Task 2: Multiple Sequence Alignment
  458. Task 2: Sequence alignments (sequence searches and multiple alignments)
  459. Task 2 (MSUD)
  460. Task 2 (MUSD) Additional Results
  461. Task 2 - Alignments with PAH Reference
  462. Task 2 lab journal (MSUD)
  463. Task 3: Sequence-based predictions
  464. Task 3: odba human Sequence-based predictions
  465. Task 3 (MSUD)
  466. Task 3 - Normal Mode Analysis
  467. Task 3 - Sequence-based predictions 2011
  468. Task 3 - Sequence-based predictions 2012
  469. Task 4: Homology-based structure prediction
  470. Task 4: Homology based structure predictions
  471. Task 4: Structural Alignments
  472. Task 4 (MSUD)
  473. Task 4 Protocol
  474. Task 5: Homology Modeling
  475. Task 5: Mapping point mutations
  476. Task 5: Researching SNPs
  477. Task 5 (MSUD)
  478. Task 5 - Mapping SNPs
  479. Task 5 - Mapping SNPs 2011
  480. Task 5 - Mapping SNPs Canavan
  481. Task 5 - Researching SNPs
  482. Task 6: MSUD - Sequence-based mutation analysis
  483. Task 6: Protein structure prediction from evolutionary sequence variation
  484. Task 6: Sequence-based mutation analysis
  485. Task 6 (MSUD)
  486. Task 6 - EVfold
  487. Task 6 - Protein structure prediction from evolutionary sequence variation
  488. Task 6 - Sequence-based mutation analysis
  489. Task 6 - Sequence-based mutation analysis 2011
  490. Task 6 Lab Journal (MSUD)
  491. Task 7: MSUD - Structure-based mutation analysis
  492. Task 7: Research SNPs
  493. Task 7: Structure-based mutation analysis
  494. Task 7 (MSUD)
  495. Task 7 - Structure-based mutation analysis
  496. Task 7 - Structure-based mutation analysis 2011
  497. Task 7 Research SNPs
  498. Task 8: MSUD - Molecular Dynamics Simulations
  499. Task 8: Molecular Dynamics Simulations
  500. Task 8: Sequence-based mutation analysis

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