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From Bioinformatikpedia
  • The script can be found in <code>/mnt/home/student/schillerl/MasterPractical/task2/create_dataset.py</code>. The datasets are located at <code>/mnt/home/student/schillerl/MasterPractical/task2/datasets/</code>.
    21 KB (2,853 words) - 18:26, 9 August 2013
  • * The PDB files used as input for DSSP are located at <code>/mnt/home/student/schillerl/MasterPractical/task3/pdb_structures/</code>. If there were more than one P ...d the following Python script (which is located at <code>/mnt/home/student/schillerl/MasterPractical/task3/dssp/parse_dssp_output.py</code>):
    19 KB (2,626 words) - 15:40, 18 June 2013
  • The models are stored in <code>/mnt/home/student/schillerl/MasterPractical/task4/hhmakemodel/</code>. LGA results can be found in <code>/mnt/home/student/schillerl/MasterPractical/task4/LGA/</code>.
    3 KB (373 words) - 13:30, 2 August 2013
  • ...token=TOKEN this server]. The models are stored in <code>/mnt/home/student/schillerl/MasterPractical/task5/Swissmodel/</code>. ...the iTasser template library. Models are stored in <code>/mnt/home/student/schillerl/MasterPractical/task5/iTasser/</code>.
    3 KB (435 words) - 14:07, 2 August 2013
  • ...t output was analyzed with the R script located at <code>/mnt/home/student/schillerl/MasterPractical/task6/analyse_correlated_mutations.r</code>.
    2 KB (319 words) - 20:40, 15 June 2013
  • source("/mnt/home/student/schillerl/MasterPractical/format_to_wiki_table.r")
    2 KB (261 words) - 12:46, 22 June 2013
  • ...file with the following Python script (located at <code>/mnt/home/student/schillerl/MasterPractical/task8/extract_aa_frequency.py</code>):
    9 KB (901 words) - 15:17, 30 August 2013
  • ...the sequence with the following script (located at <code>/mnt/home/student/schillerl/MasterPractical/task9/create_mutated_sequences.py</code>): The mutat structures are located at <code>/mnt/home/student/schillerl/MasterPractical/task9/scwrl/</code>.
    6 KB (706 words) - 14:56, 2 August 2013