User contributions
From Bioinformatikpedia
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- 18:51, 12 September 2011 (diff | hist) . . (+116) . . Task 10: Molecular Dynamics Analysis (→QUALITY ASSURANCE)
- 18:51, 12 September 2011 (diff | hist) . . (0) . . N File:Pressure.png (current)
- 18:50, 12 September 2011 (diff | hist) . . (0) . . N File:Pah Energy.png (current)
- 18:49, 12 September 2011 (diff | hist) . . (0) . . N File:Density.png (current)
- 18:49, 12 September 2011 (diff | hist) . . (0) . . N File:Coulomb-inter.png (current)
- 18:48, 12 September 2011 (diff | hist) . . (0) . . N File:Box.png (current)
- 16:40, 12 September 2011 (diff | hist) . . (+270) . . Task 10: Molecular Dynamics Analysis (→CONVERGENCE OF ENERGY TERMS)
- 16:21, 12 September 2011 (diff | hist) . . (+429) . . Task 10: Molecular Dynamics Analysis (→CONVERGENCE OF ENERGY TERMS)
- 15:53, 12 September 2011 (diff | hist) . . (0) . . Task 10: Molecular Dynamics Analysis (→CONVERGENCE OF ENERGY TERMS)
- 15:48, 12 September 2011 (diff | hist) . . (+266) . . Task 10: Molecular Dynamics Analysis (→CONVERGENCE OF ENERGY TERMS)
- 15:44, 12 September 2011 (diff | hist) . . (+1,218) . . Task 10: Molecular Dynamics Analysis (→Native)
- 14:53, 12 September 2011 (diff | hist) . . (+28) . . Task 10: Molecular Dynamics Analysis (→Native)
- 14:44, 12 September 2011 (diff | hist) . . (-5) . . Task 10: Molecular Dynamics Analysis (→VISUALIZATION OF RESULTS)
- 14:43, 12 September 2011 (diff | hist) . . (-1) . . Task 10: Molecular Dynamics Analysis (→VISUALIZATION OF RESULTS)
- 14:42, 12 September 2011 (diff | hist) . . (+496) . . Task 10: Molecular Dynamics Analysis (→VISUALIZATION OF RESULTS)
- 14:31, 12 September 2011 (diff | hist) . . (0) . . File:Cartoon view animaion.gif (uploaded a new version of "File:Cartoon view animaion.gif") (current)
- 14:27, 12 September 2011 (diff | hist) . . (0) . . N File:Cartoon view animaion.gif
- 14:26, 12 September 2011 (diff | hist) . . (0) . . N File:Line view animaion.gif (current)
- 05:59, 7 September 2011 (diff | hist) . . (+495) . . Task 10: Molecular Dynamics Analysis (→VISUALIZATION OF RESULTS)
- 16:50, 6 September 2011 (diff | hist) . . (+404) . . Task 10: Molecular Dynamics Analysis (→VISUALIZATION OF RESULTS)
- 17:57, 4 September 2011 (diff | hist) . . (+36) . . Task 10: Molecular Dynamics Analysis (→Native)
- 14:21, 4 September 2011 (diff | hist) . . (+6) . . Task 10: Molecular Dynamics Analysis (→Native)
- 14:20, 4 September 2011 (diff | hist) . . (+125) . . Task 10: Molecular Dynamics Analysis (→Native)
- 13:54, 4 September 2011 (diff | hist) . . (+469) . . Task 10: Molecular Dynamics Analysis (→Native)
- 13:18, 4 September 2011 (diff | hist) . . (+261) . . Task 10: Molecular Dynamics Analysis (→Native)
- 19:55, 31 August 2011 (diff | hist) . . (+29) . . Task 7: Structure-based mutation analysis (→R408W) (current)
- 19:54, 31 August 2011 (diff | hist) . . (+22) . . Task 7: Structure-based mutation analysis (→G312D)
- 19:53, 31 August 2011 (diff | hist) . . (+39) . . Task 7: Structure-based mutation analysis (→P281L)
- 19:52, 31 August 2011 (diff | hist) . . (+29) . . Task 7: Structure-based mutation analysis (→R261Q)
- 19:51, 31 August 2011 (diff | hist) . . (+122) . . Task 7: Structure-based mutation analysis (→Timerun)
- 19:49, 31 August 2011 (diff | hist) . . (+135) . . Task 7: Structure-based mutation analysis (→R408W)
- 19:48, 31 August 2011 (diff | hist) . . (+134) . . Task 7: Structure-based mutation analysis (→G312D)
- 19:47, 31 August 2011 (diff | hist) . . (+135) . . Task 7: Structure-based mutation analysis (→P281L)
- 19:46, 31 August 2011 (diff | hist) . . (+135) . . Task 7: Structure-based mutation analysis (→T278N)
- 19:45, 31 August 2011 (diff | hist) . . (+135) . . Task 7: Structure-based mutation analysis (→P275S)
- 19:44, 31 August 2011 (diff | hist) . . (+135) . . Task 7: Structure-based mutation analysis (→T266A)
- 19:43, 31 August 2011 (diff | hist) . . (0) . . Task 7: Structure-based mutation analysis (→R261Q)
- 19:43, 31 August 2011 (diff | hist) . . (+135) . . Task 7: Structure-based mutation analysis (→R261Q)
- 19:42, 31 August 2011 (diff | hist) . . (+135) . . Task 7: Structure-based mutation analysis (→R158Q)
- 19:40, 31 August 2011 (diff | hist) . . (+702) . . Task 7: Structure-based mutation analysis (→Hydrogen bond network of the WT and mutants)
- 19:34, 31 August 2011 (diff | hist) . . (+18) . . Task 7: Structure-based mutation analysis (→Hydrogen bond network of the WT and mutants)
- 19:33, 31 August 2011 (diff | hist) . . (+499) . . Task 7: Structure-based mutation analysis (→Introducing mutations to 1J8U)
- 19:27, 31 August 2011 (diff | hist) . . (+221) . . Task 7: Structure-based mutation analysis (→Binding Site)
- 19:25, 31 August 2011 (diff | hist) . . (0) . . Task 7: Structure-based mutation analysis (→Binding Site)
- 19:24, 31 August 2011 (diff | hist) . . (+95) . . Task 7: Structure-based mutation analysis (→Binding Site)
- 19:22, 31 August 2011 (diff | hist) . . (+10) . . Task 7: Structure-based mutation analysis (→Selection of protein structure)
- 19:22, 31 August 2011 (diff | hist) . . (+120) . . Task 7: Structure-based mutation analysis (→Mapping mutations to the structure)
- 19:20, 31 August 2011 (diff | hist) . . (0) . . Task 7: Structure-based mutation analysis (→Selection of protein structure)
- 19:19, 31 August 2011 (diff | hist) . . (+90) . . Task 7: Structure-based mutation analysis (→Selection of protein structure)
- 19:13, 31 August 2011 (diff | hist) . . (+22) . . Task 6: Sequence-based mutation analysis (→Predicting the effect of mutations with SNAP, SIFT and Polyphen2)
- 19:12, 31 August 2011 (diff | hist) . . (+211) . . Task 6: Sequence-based mutation analysis (→Catalytic sites and mutations)
- 19:08, 31 August 2011 (diff | hist) . . (+51) . . Task 6: Sequence-based mutation analysis (→Catalytic sites and mutations)
- 19:06, 31 August 2011 (diff | hist) . . (+6) . . Task 6: Sequence-based mutation analysis (→Mutations compared to BLOSUM62, PAM(1/250), PSSM and conservation of MSA with all mammalian homologous)
- 19:04, 31 August 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→P275S)
- 19:04, 31 August 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→R261Q)
- 19:03, 31 August 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→R71H)
- 19:03, 31 August 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→I65T)
- 19:02, 31 August 2011 (diff | hist) . . (+59) . . Task 6: Sequence-based mutation analysis (→MSA with all mammalian homologous)
- 18:59, 31 August 2011 (diff | hist) . . (+4) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 18:58, 31 August 2011 (diff | hist) . . (+9) . . Task 6: Sequence-based mutation analysis (→Visualization of the changed Amino Acid)
- 18:57, 31 August 2011 (diff | hist) . . (+507) . . Task 6: Sequence-based mutation analysis (→Visualization of the changed Amino Acid)
- 18:47, 31 August 2011 (diff | hist) . . (+84) . . Task 6: Sequence-based mutation analysis (→Physicochemical properties and changes)
- 18:46, 31 August 2011 (diff | hist) . . (+82) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 18:39, 31 August 2011 (diff | hist) . . (+276) . . Task 9: Normal Mode Analysis (→Result) (current)
- 18:33, 31 August 2011 (diff | hist) . . (+11) . . Task 9: Normal Mode Analysis (→Execution)
- 18:32, 31 August 2011 (diff | hist) . . (-34) . . Task 9: Normal Mode Analysis (→Execution)
- 18:30, 31 August 2011 (diff | hist) . . (+48) . . Task 9: Normal Mode Analysis (→Result)
- 18:28, 31 August 2011 (diff | hist) . . (+21) . . Task 9: Normal Mode Analysis (→Result)
- 18:26, 31 August 2011 (diff | hist) . . (-23) . . Task 9: Normal Mode Analysis (→Execution)
- 18:24, 31 August 2011 (diff | hist) . . (-10) . . Task 9: Normal Mode Analysis (→Discussion)
- 18:22, 31 August 2011 (diff | hist) . . (+102) . . Task 9: Normal Mode Analysis (→Results)
- 18:19, 31 August 2011 (diff | hist) . . (+26) . . Task 9: Normal Mode Analysis (→Results)
- 18:18, 31 August 2011 (diff | hist) . . (-8) . . Task 9: Normal Mode Analysis (→Execution)
- 18:17, 31 August 2011 (diff | hist) . . (-69) . . Task 9: Normal Mode Analysis (→Execution)
- 18:16, 31 August 2011 (diff | hist) . . (+1,488) . . Task 9: Normal Mode Analysis (→Anisotropic Network Model web server)
- 18:03, 31 August 2011 (diff | hist) . . (+360) . . Task 9: Normal Mode Analysis (→CA-fluctuations)
- 18:01, 31 August 2011 (diff | hist) . . (0) . . Task 9: Normal Mode Analysis (→Visualization of Normal Modes)
- 17:57, 31 August 2011 (diff | hist) . . (+693) . . Task 9: Normal Mode Analysis (→Visualization of Normal Modes)
- 17:48, 31 August 2011 (diff | hist) . . (+622) . . Task 9: Normal Mode Analysis (→ElNemo)
- 17:39, 31 August 2011 (diff | hist) . . (+329) . . Task 9: Normal Mode Analysis (→ElNemo)
- 17:35, 31 August 2011 (diff | hist) . . (+490) . . Task 9: Normal Mode Analysis (→Visualization of Normal Modes)
- 17:31, 31 August 2011 (diff | hist) . . (+335) . . Task 9: Normal Mode Analysis (→Webnma)
- 17:29, 31 August 2011 (diff | hist) . . (0) . . Task 9: Normal Mode Analysis (→Webnma)
- 17:29, 31 August 2011 (diff | hist) . . (+22) . . Task 9: Normal Mode Analysis (→Webnma)
- 17:16, 31 August 2011 (diff | hist) . . (+44) . . Task 9: Normal Mode Analysis (→Webnma)
- 15:53, 31 August 2011 (diff | hist) . . (+602) . . Task 9: Normal Mode Analysis (→Discussion)
- 14:35, 31 August 2011 (diff | hist) . . (+236) . . Task 9: Normal Mode Analysis (→Result)
- 14:27, 31 August 2011 (diff | hist) . . (+288) . . Task 9: Normal Mode Analysis (→Comparison to elastic network calculation (NOMAD-Ref))
- 14:22, 31 August 2011 (diff | hist) . . (0) . . N File:Mode11 1bpt animaion.gif (current)
- 14:21, 31 August 2011 (diff | hist) . . (0) . . N File:Mode10 1bpt animaion.gif (current)
- 14:21, 31 August 2011 (diff | hist) . . (0) . . N File:Mode9 1bpt animaion.gif (current)
- 14:21, 31 August 2011 (diff | hist) . . (0) . . N File:Mode8 1bpt animaion.gif (current)
- 14:20, 31 August 2011 (diff | hist) . . (0) . . N File:Mode7 1bpt animaion.gif (current)
- 12:45, 31 August 2011 (diff | hist) . . (+624) . . Task 9: Normal Mode Analysis (→Execution)
- 12:36, 31 August 2011 (diff | hist) . . (+29) . . Task 9: Normal Mode Analysis (→Execution)
- 12:36, 31 August 2011 (diff | hist) . . (0) . . N File:Input gromacs 600k.png (current)
- 12:35, 31 August 2011 (diff | hist) . . (+165) . . Task 9: Normal Mode Analysis (→Introduction to the method)
- 12:32, 31 August 2011 (diff | hist) . . (+378) . . Task 9: Normal Mode Analysis (→Introduction to the method)
- 12:13, 31 August 2011 (diff | hist) . . (+65) . . Task 9: Normal Mode Analysis (→2000k)
- 12:11, 31 August 2011 (diff | hist) . . (+293) . . Task 9: Normal Mode Analysis (→Discussion)
- 11:55, 31 August 2011 (diff | hist) . . (+244) . . Task 9: Normal Mode Analysis (→Mode 11)
- 11:50, 31 August 2011 (diff | hist) . . (+300) . . Task 9: Normal Mode Analysis (→Mode 10)
- 11:49, 31 August 2011 (diff | hist) . . (+220) . . Task 9: Normal Mode Analysis (→Mode 9)
- 11:37, 31 August 2011 (diff | hist) . . (+414) . . Task 9: Normal Mode Analysis (→Mode 8)
- 11:19, 31 August 2011 (diff | hist) . . (+265) . . Task 9: Normal Mode Analysis (→Mode 7)
- 08:11, 31 August 2011 (diff | hist) . . (+236) . . Task 9: Normal Mode Analysis (→Result)
- 07:59, 31 August 2011 (diff | hist) . . (+1,254) . . Task 9: Normal Mode Analysis (→Introduction to the method)
- 07:08, 31 August 2011 (diff | hist) . . (0) . . Task 9: Normal Mode Analysis (→Execution)
- 17:53, 30 August 2011 (diff | hist) . . (+671) . . Task 9: Normal Mode Analysis (→Execution)
- 17:32, 30 August 2011 (diff | hist) . . (0) . . N File:Input j18u nomad ref.png (current)
- 16:47, 30 August 2011 (diff | hist) . . (+165) . . Task 9: Normal Mode Analysis (→Discussion)
- 16:45, 30 August 2011 (diff | hist) . . (+1,455) . . Task 9: Normal Mode Analysis (→Discussion)
- 15:45, 30 August 2011 (diff | hist) . . (+110) . . Task 9: Normal Mode Analysis (→Discussion)
- 15:41, 30 August 2011 (diff | hist) . . (+33) . . Task 9: Normal Mode Analysis (→Discussion)
- 15:37, 30 August 2011 (diff | hist) . . (0) . . N File:Mode7to11 pah oGNM.png (current)
- 13:49, 30 August 2011 (diff | hist) . . (+796) . . Task 9: Normal Mode Analysis (→Results)
- 13:25, 30 August 2011 (diff | hist) . . (+209) . . Task 9: Normal Mode Analysis (→Results)
- 08:05, 30 August 2011 (diff | hist) . . (-5) . . Task 9: Normal Mode Analysis (→Results)
- 08:04, 30 August 2011 (diff | hist) . . (+55) . . Task 9: Normal Mode Analysis (→Results)
- 12:57, 29 August 2011 (diff | hist) . . (+331) . . Task 9: Normal Mode Analysis (→Results)
- 12:22, 29 August 2011 (diff | hist) . . (+441) . . Task 9: Normal Mode Analysis (→Introduction to the method)
- 18:23, 21 August 2011 (diff | hist) . . (+19) . . Task 9: Normal Mode Analysis (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 18:07, 21 August 2011 (diff | hist) . . (+1,145) . . Task 9: Normal Mode Analysis (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 18:06, 21 August 2011 (diff | hist) . . (0) . . N File:Mode15 2000k animaion.gif (current)
- 18:05, 21 August 2011 (diff | hist) . . (0) . . N File:Mode14 2000k animaion.gif (current)
- 18:05, 21 August 2011 (diff | hist) . . (0) . . N File:Mode13 2000k animaion.gif (current)
- 18:05, 21 August 2011 (diff | hist) . . (0) . . N File:Mode12 2000k animaion.gif (current)
- 18:04, 21 August 2011 (diff | hist) . . (0) . . N File:Mode11 2000k animaion.gif (current)
- 18:04, 21 August 2011 (diff | hist) . . (0) . . N File:Mode10 2000k animaion.gif (current)
- 18:03, 21 August 2011 (diff | hist) . . (0) . . N File:Mode9 2000k animaion.gif (current)
- 18:03, 21 August 2011 (diff | hist) . . (0) . . N File:Mode8 2000k animaion.gif (current)
- 18:00, 21 August 2011 (diff | hist) . . (0) . . N File:Mode7 2000k animaion.gif (current)
- 17:59, 21 August 2011 (diff | hist) . . (0) . . N File:Mode15 600k animaion.gif (current)
- 17:59, 21 August 2011 (diff | hist) . . (0) . . N File:Mode14 600k animaion.gif (current)
- 17:58, 21 August 2011 (diff | hist) . . (0) . . N File:Mode13 600k animaion.gif (current)
- 17:58, 21 August 2011 (diff | hist) . . (0) . . N File:Mode12 600k animaion.gif (current)
- 17:58, 21 August 2011 (diff | hist) . . (0) . . N File:Mode11 600k animaion.gif (current)
- 17:57, 21 August 2011 (diff | hist) . . (0) . . N File:Mode10 600k animaion.gif (current)
- 17:57, 21 August 2011 (diff | hist) . . (0) . . N File:Mode9 600k animaion.gif (current)
- 17:57, 21 August 2011 (diff | hist) . . (0) . . N File:Mode8 600k animaion.gif (current)
- 17:55, 21 August 2011 (diff | hist) . . (0) . . N File:Mode7 600k animaion.gif (current)
- 18:00, 20 August 2011 (diff | hist) . . (+960) . . Task 9: Normal Mode Analysis (→Result)
- 17:59, 20 August 2011 (diff | hist) . . (0) . . N File:Mode11 animaion.gif (current)
- 17:59, 20 August 2011 (diff | hist) . . (0) . . N File:Mode10 animaion.gif (current)
- 17:58, 20 August 2011 (diff | hist) . . (0) . . N File:Mode9 animaion.gif (current)
- 17:58, 20 August 2011 (diff | hist) . . (0) . . N File:Mode8 animaion.gif (current)
- 17:57, 20 August 2011 (diff | hist) . . (0) . . N File:Mode 11 pah.png (current)
- 17:57, 20 August 2011 (diff | hist) . . (0) . . N File:Mode 10 pah.png (current)
- 17:57, 20 August 2011 (diff | hist) . . (0) . . N File:Mode 9 pah.png (current)
- 17:56, 20 August 2011 (diff | hist) . . (0) . . N File:Mode 8 pah.png (current)
- 17:53, 20 August 2011 (diff | hist) . . (+236) . . Task 9: Normal Mode Analysis (→Result)
- 17:51, 20 August 2011 (diff | hist) . . (0) . . N File:Mode 7 pah.png (current)
- 17:50, 20 August 2011 (diff | hist) . . (0) . . N File:Mode7 animaion.gif (current)
- 16:39, 20 August 2011 (diff | hist) . . (+91) . . Task 9: Normal Mode Analysis (→NOMAD-Ref)
- 16:33, 20 August 2011 (diff | hist) . . (+883) . . Task 9: Normal Mode Analysis (→Results)
- 16:33, 20 August 2011 (diff | hist) . . (0) . . N File:Mode11 pah.png (current)
- 16:33, 20 August 2011 (diff | hist) . . (0) . . N File:Mode10 pah.png (current)
- 16:32, 20 August 2011 (diff | hist) . . (0) . . N File:Mode9 pah.png (current)
- 16:32, 20 August 2011 (diff | hist) . . (0) . . N File:Mode8 pah.png (current)
- 16:31, 20 August 2011 (diff | hist) . . (0) . . N File:3d mode11.png (current)
- 16:31, 20 August 2011 (diff | hist) . . (0) . . N File:3d mode10.png (current)
- 16:31, 20 August 2011 (diff | hist) . . (0) . . N File:3d mode9.png (current)
- 16:31, 20 August 2011 (diff | hist) . . (0) . . N File:3d mode8.png (current)
- 16:25, 20 August 2011 (diff | hist) . . (+7) . . Task 9: Normal Mode Analysis (→oGNM – Gaussian network model)
- 16:25, 20 August 2011 (diff | hist) . . (0) . . N File:Mode7 pah.png (current)
- 16:24, 20 August 2011 (diff | hist) . . (0) . . N File:3d mode7.png (current)
- 16:23, 20 August 2011 (diff | hist) . . (+325) . . Task 9: Normal Mode Analysis (→oGNM – Gaussian network model)
- 14:25, 20 August 2011 (diff | hist) . . (+21) . . Task 9: Normal Mode Analysis (→Execution)
- 14:22, 20 August 2011 (diff | hist) . . (+107) . . Task 9: Normal Mode Analysis (→Execution)
- 14:20, 20 August 2011 (diff | hist) . . (-59) . . Task 9: Normal Mode Analysis (→Execution)
- 14:19, 20 August 2011 (diff | hist) . . (+11) . . Task 9: Normal Mode Analysis (→Execution)
- 14:19, 20 August 2011 (diff | hist) . . (+83) . . Task 9: Normal Mode Analysis (→Execution)
- 14:08, 20 August 2011 (diff | hist) . . (+1) . . Task 9: Normal Mode Analysis (→Execution)
- 14:08, 20 August 2011 (diff | hist) . . (+277) . . Task 9: Normal Mode Analysis (→Execution)
- 14:07, 20 August 2011 (diff | hist) . . (0) . . N File:Input.png (current)
- 12:46, 20 August 2011 (diff | hist) . . (+42) . . Task 9: Normal Mode Analysis (→Introduction to the method)
- 12:32, 20 August 2011 (diff | hist) . . (+764) . . Task 9: Normal Mode Analysis (→oGNM – Gaussian network model)
- 00:18, 10 July 2011 (diff | hist) . . (0) . . m Task 8: Molecular Dynamics Simulations (→LRZ) (current)
- 22:37, 9 July 2011 (diff | hist) . . (-4) . . Task 8: Molecular Dynamics Simulations (→Intro and selection of two mutants)
- 22:35, 9 July 2011 (diff | hist) . . (+1,371) . . Task 8: Molecular Dynamics Simulations (→LRZ)
- 22:19, 9 July 2011 (diff | hist) . . (+1,192) . . Task 8: Molecular Dynamics Simulations (→Production run)
- 22:11, 9 July 2011 (diff | hist) . . (0) . . Task 8: Molecular Dynamics Simulations (→Heating up the System with constant pressure and particle number (NPT))
- 22:11, 9 July 2011 (diff | hist) . . (+2,971) . . Task 8: Molecular Dynamics Simulations (→Equilibration of system)
- 21:37, 9 July 2011 (diff | hist) . . (+1,132) . . Task 8: Molecular Dynamics Simulations (→Minimization system)
- 21:25, 9 July 2011 (diff | hist) . . (+1,099) . . Task 8: Molecular Dynamics Simulations (→Minimization solvent)
- 21:11, 9 July 2011 (diff | hist) . . (+715) . . Task 8: Molecular Dynamics Simulations (→Create important GROMACS files)
- 20:34, 9 July 2011 (diff | hist) . . (+280) . . Task 8: Molecular Dynamics Simulations (→Create important GROMACS files)
- 20:29, 9 July 2011 (diff | hist) . . (+2,277) . . Task 8: Molecular Dynamics Simulations (→Create important GROMACS files)
- 19:41, 9 July 2011 (diff | hist) . . (+392) . . Task 8: Molecular Dynamics Simulations
- 15:07, 9 July 2011 (diff | hist) . . (+397) . . Task 8: Molecular Dynamics Simulations (→Preperation)
- 15:02, 9 July 2011 (diff | hist) . . (+24) . . Task 8: Molecular Dynamics Simulations (→Preperation)
- 15:02, 9 July 2011 (diff | hist) . . (+483) . . Task 8: Molecular Dynamics Simulations (→Preperation)
- 14:58, 9 July 2011 (diff | hist) . . (+1,307) . . Task 8: Molecular Dynamics Simulations
- 14:28, 9 July 2011 (diff | hist) . . (+118) . . N Task 8: Molecular Dynamics Simulations (Created page with "== Task description == A detailed task description can be found here.")
- 14:28, 9 July 2011 (diff | hist) . . (-3) . . Task 7: Structure-based mutation analysis (→Task description)
- 14:27, 9 July 2011 (diff | hist) . . (+45) . . Phenylketonuria 2011 (→Tasks)
- 21:44, 4 July 2011 (diff | hist) . . (+1,898) . . Task 7: Structure-based mutation analysis (→T278N)
- 21:20, 4 July 2011 (diff | hist) . . (-5) . . Task 7: Structure-based mutation analysis (→R158Q)
- 21:19, 4 July 2011 (diff | hist) . . (+1,793) . . Task 7: Structure-based mutation analysis (→P275S)
- 21:07, 4 July 2011 (diff | hist) . . (0) . . Task 7: Structure-based mutation analysis (→R158Q)
- 21:06, 4 July 2011 (diff | hist) . . (+1,942) . . Task 7: Structure-based mutation analysis (→T266A)
- 20:56, 4 July 2011 (diff | hist) . . (+2,428) . . Task 7: Structure-based mutation analysis (→Final results and discussion)
- 20:15, 4 July 2011 (diff | hist) . . (+5) . . Task 7: Structure-based mutation analysis (→Hydrogen bond network of the WT and mutants)
- 19:14, 4 July 2011 (diff | hist) . . (+116) . . m Task 7: Structure-based mutation analysis (→R71H)
- 19:14, 4 July 2011 (diff | hist) . . (+116) . . Task 7: Structure-based mutation analysis (→I65T)
- 19:11, 4 July 2011 (diff | hist) . . (+947) . . Task 7: Structure-based mutation analysis (→Hydrogen bond network of the WT and mutants)
- 18:37, 4 July 2011 (diff | hist) . . (+238) . . Task 7: Structure-based mutation analysis (→Hydrogen bond network of the WT and mutants)
- 23:56, 2 July 2011 (diff | hist) . . (+1,856) . . Task 7: Structure-based mutation analysis (→Hydrogen bond network of the WT and mutants)
- 23:52, 2 July 2011 (diff | hist) . . (+1,187) . . Task 7: Structure-based mutation analysis (→R158Q)
- 23:25, 2 July 2011 (diff | hist) . . (+92) . . Task 7: Structure-based mutation analysis (→T278N)
- 23:25, 2 July 2011 (diff | hist) . . (0) . . N File:N278.png (current)
- 23:25, 2 July 2011 (diff | hist) . . (0) . . N File:T278.png (current)
- 23:24, 2 July 2011 (diff | hist) . . (+93) . . Task 7: Structure-based mutation analysis (→P275S)
- 23:24, 2 July 2011 (diff | hist) . . (0) . . N File:P275.png (current)
- 23:23, 2 July 2011 (diff | hist) . . (0) . . N File:S275.png (current)
- 23:22, 2 July 2011 (diff | hist) . . (+92) . . Task 7: Structure-based mutation analysis (→T266A)
- 23:22, 2 July 2011 (diff | hist) . . (0) . . N File:A266.png (current)
- 23:22, 2 July 2011 (diff | hist) . . (0) . . N File:T266.png (current)
- 23:20, 2 July 2011 (diff | hist) . . (+51) . . Task 7: Structure-based mutation analysis (→R158Q)
- 23:20, 2 July 2011 (diff | hist) . . (0) . . N File:Q158.png (current)
- 23:19, 2 July 2011 (diff | hist) . . (0) . . N File:R158.png (current)
- 23:18, 2 July 2011 (diff | hist) . . (+42) . . Task 7: Structure-based mutation analysis (→Hydrogen bond network of the WT and mutants)
- 21:14, 2 July 2011 (diff | hist) . . (+166) . . Task 7: Structure-based mutation analysis (→Hydrogen bond network of the WT and mutants)
- 21:12, 2 July 2011 (diff | hist) . . (+169) . . Task 7: Structure-based mutation analysis (→Final results and discussion)
- 21:11, 2 July 2011 (diff | hist) . . (+881) . . Task 7: Structure-based mutation analysis (→Final results and discussion)
- 20:57, 2 July 2011 (diff | hist) . . (+383) . . Task 7: Structure-based mutation analysis (→Results)
- 20:52, 2 July 2011 (diff | hist) . . (+2,320) . . Task 7: Structure-based mutation analysis (→Results)
- 20:26, 2 July 2011 (diff | hist) . . (+583) . . Task 7: Structure-based mutation analysis (→FoldX)
- 20:22, 2 July 2011 (diff | hist) . . (+451) . . Task 7: Structure-based mutation analysis (→FoldX)
- 17:49, 2 July 2011 (diff | hist) . . (+89) . . Task 7: Structure-based mutation analysis
- 17:47, 2 July 2011 (diff | hist) . . (+15) . . Task 7: Structure-based mutation analysis
- 17:47, 2 July 2011 (diff | hist) . . (+959) . . Task 7: Structure-based mutation analysis (→SCRWL versus PyMol: Comparison of the rotation of the side chains)
- 17:24, 2 July 2011 (diff | hist) . . (+439) . . Task 7: Structure-based mutation analysis (→SCRWL versus PyMol: Comparison of the rotation of the side chains)
- 08:50, 2 July 2011 (diff | hist) . . (+261) . . Task 7: Structure-based mutation analysis (→SCRWL versus PyMol: Comparison of the rotation of the side chains)
- 08:16, 2 July 2011 (diff | hist) . . (+968) . . Task 7: Structure-based mutation analysis (→SCRWL versus PyMol: Comparison of the rotation of the side chains)
- 22:36, 30 June 2011 (diff | hist) . . (+228) . . Task 7: Structure-based mutation analysis (→SCRWL versus PyMol: Comparison of the rotation of the side chains)
- 22:35, 30 June 2011 (diff | hist) . . (0) . . N File:R408W.png (current)
- 22:34, 30 June 2011 (diff | hist) . . (0) . . N File:G312D.png (current)
- 22:33, 30 June 2011 (diff | hist) . . (0) . . N File:P281L task7.png (current)
- 22:32, 30 June 2011 (diff | hist) . . (0) . . N File:T278N task7.png (current)
- 22:31, 30 June 2011 (diff | hist) . . (0) . . N File:P275S task7.png (current)
- 22:30, 30 June 2011 (diff | hist) . . (0) . . N File:T266A task7.png (current)
- 22:29, 30 June 2011 (diff | hist) . . (0) . . N File:R261Q.png (current)
- 22:29, 30 June 2011 (diff | hist) . . (+20) . . Task 7: Structure-based mutation analysis (→SCRWL versus PyMol: Comparison of the rotation of the side chains)
- 22:28, 30 June 2011 (diff | hist) . . (0) . . N File:R158Q.png (current)
- 20:18, 30 June 2011 (diff | hist) . . (+9) . . Task 7: Structure-based mutation analysis (→Introducing mutations to 1J8U)
- 20:17, 30 June 2011 (diff | hist) . . (+1) . . Task 7: Structure-based mutation analysis (→Introducing mutations to 1J8U)
- 20:17, 30 June 2011 (diff | hist) . . (0) . . m Task 7: Structure-based mutation analysis (→Introducing mutations to 1J8U with SCWRL)
- 20:17, 30 June 2011 (diff | hist) . . (+1) . . Task 7: Structure-based mutation analysis (→Introducing mutations to 1J8U)
- 20:16, 30 June 2011 (diff | hist) . . (+35) . . Task 7: Structure-based mutation analysis (→Introducing mutations to 1J8U)
- 20:15, 30 June 2011 (diff | hist) . . (+4) . . Task 7: Structure-based mutation analysis (→Introducing mutations to 1J8U)
- 20:15, 30 June 2011 (diff | hist) . . (+1,207) . . Task 7: Structure-based mutation analysis (→Introducing mutations to 1J8U with SCRWL)
- 20:10, 30 June 2011 (diff | hist) . . (+4) . . Task 7: Structure-based mutation analysis (→Introducing mutations to 1J8U)
- 20:09, 30 June 2011 (diff | hist) . . (+519) . . Task 7: Structure-based mutation analysis
- 19:48, 30 June 2011 (diff | hist) . . (+79) . . Task 7: Structure-based mutation analysis (→Mapping mutations to the structure)
- 19:47, 30 June 2011 (diff | hist) . . (+1,897) . . Task 7: Structure-based mutation analysis (→Mapping mutations to the structure)
- 19:38, 30 June 2011 (diff | hist) . . (+7) . . Task 7: Structure-based mutation analysis (→Mapping mutations to the structure)
- 19:37, 30 June 2011 (diff | hist) . . (+43) . . Task 7: Structure-based mutation analysis (→Mapping mutations to the structure)
- 19:37, 30 June 2011 (diff | hist) . . (0) . . N File:Catalytic site and mutations.png (current)
- 16:40, 30 June 2011 (diff | hist) . . (+1,523) . . Task 7: Structure-based mutation analysis (→Selection of protein structure)
- 16:40, 30 June 2011 (diff | hist) . . (0) . . N File:1J8U experimental details.png (current)
- 16:11, 30 June 2011 (diff | hist) . . (+777) . . Task 7: Structure-based mutation analysis (→Selection of protein structure)
- 15:57, 30 June 2011 (diff | hist) . . (+80) . . Task 7: Structure-based mutation analysis
- 15:54, 30 June 2011 (diff | hist) . . (-63) . . Task 7: Structure-based mutation analysis (→Task description)
- 15:53, 30 June 2011 (diff | hist) . . (+64) . . Task 7: Structure-based mutation analysis (→Task description)
- 15:53, 30 June 2011 (diff | hist) . . (+118) . . N Task 7: Structure-based mutation analysis (Created page with " == Task description == A detailed task description can be found Task_7_-_Structure-based_mutation_analysis here.")
- 15:51, 30 June 2011 (diff | hist) . . (+48) . . Phenylketonuria 2011 (→Tasks)
- 21:55, 27 June 2011 (diff | hist) . . (-25) . . Task 6: Sequence-based mutation analysis (→Discussion)
- 21:54, 27 June 2011 (diff | hist) . . (+3,433) . . Task 6: Sequence-based mutation analysis (→P281L)
- 21:25, 27 June 2011 (diff | hist) . . (+3,575) . . Task 6: Sequence-based mutation analysis (→T278N)
- 21:00, 27 June 2011 (diff | hist) . . (+3,523) . . Task 6: Sequence-based mutation analysis (→P275S)
- 20:26, 27 June 2011 (diff | hist) . . (+5) . . Task 6: Sequence-based mutation analysis (→R158Q)
- 20:20, 27 June 2011 (diff | hist) . . (+3,587) . . Task 6: Sequence-based mutation analysis (→T266A)
- 19:39, 27 June 2011 (diff | hist) . . (+3,869) . . Task 6: Sequence-based mutation analysis (→R158Q)
- 16:55, 27 June 2011 (diff | hist) . . (+190) . . Task 6: Sequence-based mutation analysis (→Catalytic sites and mutations)
- 16:54, 27 June 2011 (diff | hist) . . (0) . . N File:Catalytic sites and mutation 1j8u.png (current)
- 16:53, 27 June 2011 (diff | hist) . . (+729) . . Task 6: Sequence-based mutation analysis (→Catalytic sites and mutations)
- 10:21, 27 June 2011 (diff | hist) . . (+66) . . Task 6: Sequence-based mutation analysis (→R71H)
- 10:20, 27 June 2011 (diff | hist) . . (+66) . . Task 6: Sequence-based mutation analysis (→I65T)
- 10:16, 27 June 2011 (diff | hist) . . (+32) . . Task 6: Sequence-based mutation analysis (→Catalytic sites and mutations)
- 10:15, 27 June 2011 (diff | hist) . . (+119) . . Task 6: Sequence-based mutation analysis (→Catalytic sites and mutations)
- 10:13, 27 June 2011 (diff | hist) . . (+421) . . Task 6: Sequence-based mutation analysis (→Catalytic sites and mutations)
- 10:11, 27 June 2011 (diff | hist) . . (0) . . N File:Catalytic sites 1j8u.png (current)
- 10:07, 27 June 2011 (diff | hist) . . (+37) . . Task 6: Sequence-based mutation analysis
- 09:59, 27 June 2011 (diff | hist) . . (+112) . . Task 6: Sequence-based mutation analysis (→R408W)
- 09:59, 27 June 2011 (diff | hist) . . (+2) . . Task 6: Sequence-based mutation analysis (→G312D)
- 09:58, 27 June 2011 (diff | hist) . . (+145) . . Task 6: Sequence-based mutation analysis (→G312D)
- 09:58, 27 June 2011 (diff | hist) . . (+514) . . Task 6: Sequence-based mutation analysis (→P281L)
- 09:52, 27 June 2011 (diff | hist) . . (+692) . . Task 6: Sequence-based mutation analysis (→T278N)
- 09:45, 27 June 2011 (diff | hist) . . (+517) . . Task 6: Sequence-based mutation analysis (→P275S)
- 09:41, 27 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→R158Q)
- 09:40, 27 June 2011 (diff | hist) . . (+455) . . Task 6: Sequence-based mutation analysis (→T266A)
- 09:32, 27 June 2011 (diff | hist) . . (+216) . . Task 6: Sequence-based mutation analysis (→R158Q)
- 09:29, 27 June 2011 (diff | hist) . . (+113) . . Task 6: Sequence-based mutation analysis (→R261Q)
- 09:28, 27 June 2011 (diff | hist) . . (+253) . . Task 6: Sequence-based mutation analysis (→R158Q)
- 09:06, 27 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→Visualization of the changed Amino Acid)
- 09:05, 27 June 2011 (diff | hist) . . (+257) . . Task 6: Sequence-based mutation analysis (→Visualization of the changed Amino Acid)
- 23:11, 26 June 2011 (diff | hist) . . (+187) . . Task 6: Sequence-based mutation analysis (→P281L)
- 23:01, 26 June 2011 (diff | hist) . . (+185) . . Task 6: Sequence-based mutation analysis (→T278N)
- 22:52, 26 June 2011 (diff | hist) . . (+187) . . Task 6: Sequence-based mutation analysis (→P275S)
- 22:43, 26 June 2011 (diff | hist) . . (+187) . . Task 6: Sequence-based mutation analysis (→T266A)
- 22:35, 26 June 2011 (diff | hist) . . (+183) . . Task 6: Sequence-based mutation analysis (→R158Q)
- 22:21, 26 June 2011 (diff | hist) . . (+132) . . Task 6: Sequence-based mutation analysis (→PAM 1/250 matrix)
- 22:19, 26 June 2011 (diff | hist) . . (+168) . . Task 6: Sequence-based mutation analysis (→Physicochemical properties and changes)
- 22:17, 26 June 2011 (diff | hist) . . (+225) . . Task 6: Sequence-based mutation analysis (→Physicochemical properties and changes)
- 22:17, 26 June 2011 (diff | hist) . . (0) . . N File:Aa venn diagram.png (current)
- 22:12, 26 June 2011 (diff | hist) . . (-149) . . Task 6: Sequence-based mutation analysis (→Predicting the effect of mutations with SNAP, SIFT and Polyphen2)
- 22:10, 26 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→P281L)
- 22:10, 26 June 2011 (diff | hist) . . (+83) . . Task 6: Sequence-based mutation analysis (→P281L)
- 22:08, 26 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→P275S)
- 22:08, 26 June 2011 (diff | hist) . . (+62) . . Task 6: Sequence-based mutation analysis (→P275S)
- 21:55, 26 June 2011 (diff | hist) . . (+19) . . Task 6: Sequence-based mutation analysis (→T266A)
- 21:54, 26 June 2011 (diff | hist) . . (+22) . . Task 6: Sequence-based mutation analysis (→T278N)
- 21:48, 26 June 2011 (diff | hist) . . (+18) . . Task 6: Sequence-based mutation analysis (→T266A)
- 21:45, 26 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→T278N)
- 21:45, 26 June 2011 (diff | hist) . . (+40) . . Task 6: Sequence-based mutation analysis (→T278N)
- 21:44, 26 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→T266A)
- 21:43, 26 June 2011 (diff | hist) . . (+40) . . Task 6: Sequence-based mutation analysis (→T266A)
- 21:43, 26 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→R158Q)
- 21:42, 26 June 2011 (diff | hist) . . (+106) . . Task 6: Sequence-based mutation analysis (→R158Q)
- 21:39, 26 June 2011 (diff | hist) . . (+26) . . Task 6: Sequence-based mutation analysis (→P281L)
- 21:39, 26 June 2011 (diff | hist) . . (0) . . N File:P281L.png (current)
- 21:38, 26 June 2011 (diff | hist) . . (+26) . . Task 6: Sequence-based mutation analysis (→T278N)
- 21:37, 26 June 2011 (diff | hist) . . (0) . . N File:T278N.png (current)
- 21:36, 26 June 2011 (diff | hist) . . (+27) . . Task 6: Sequence-based mutation analysis (→P275S)
- 21:35, 26 June 2011 (diff | hist) . . (0) . . N File:P275S.png (current)
- 21:32, 26 June 2011 (diff | hist) . . (+26) . . Task 6: Sequence-based mutation analysis (→T266A)
- 21:31, 26 June 2011 (diff | hist) . . (0) . . N File:T266A.png (current)
- 21:31, 26 June 2011 (diff | hist) . . (0) . . Task 6: Sequence-based mutation analysis (→R158Q)
- 21:30, 26 June 2011 (diff | hist) . . (0) . . Task 6: Sequence-based mutation analysis (→R158Q)
- 21:30, 26 June 2011 (diff | hist) . . (0) . . Task 6: Sequence-based mutation analysis (→R158Q)
- 21:30, 26 June 2011 (diff | hist) . . (-6) . . Task 6: Sequence-based mutation analysis (→R158Q)
- 21:29, 26 June 2011 (diff | hist) . . (+32) . . Task 6: Sequence-based mutation analysis (→R158Q)
- 21:28, 26 June 2011 (diff | hist) . . (0) . . N File:R156Q.png (current)
- 00:27, 25 June 2011 (diff | hist) . . (-13) . . Task 6: Sequence-based mutation analysis (→MSA with all mammalian homologous)
- 00:26, 25 June 2011 (diff | hist) . . (+13) . . Task 6: Sequence-based mutation analysis (→MSA with all mammalian homologous)
- 00:24, 25 June 2011 (diff | hist) . . (+85) . . Task 6: Sequence-based mutation analysis (→MSA with all mammalian homologous)
- 00:21, 25 June 2011 (diff | hist) . . (0) . . N File:T coffee homo ali pah.png (current)
- 00:11, 25 June 2011 (diff | hist) . . (+7,710) . . Task 6: Sequence-based mutation analysis (→MSA with all mammalian homologous)
- 18:34, 24 June 2011 (diff | hist) . . (+811) . . Task 6: Sequence-based mutation analysis (→Results)
- 18:05, 24 June 2011 (diff | hist) . . (+1,186) . . Task 6: Sequence-based mutation analysis (→Results)
- 17:47, 24 June 2011 (diff | hist) . . (+421) . . Task 6: Sequence-based mutation analysis (→Polyphen2)
- 17:46, 24 June 2011 (diff | hist) . . (0) . . N File:Polyphen input batch.png (current)
- 17:33, 24 June 2011 (diff | hist) . . (+40) . . Task 6: Sequence-based mutation analysis (→Polyphen2)
- 17:22, 24 June 2011 (diff | hist) . . (+479) . . Task 6: Sequence-based mutation analysis (→SIFT)
- 17:20, 24 June 2011 (diff | hist) . . (0) . . N File:Sift input.png (current)
- 16:24, 24 June 2011 (diff | hist) . . (+3,199) . . Task 6: Sequence-based mutation analysis (→Mutations and secondary structure)
- 16:09, 24 June 2011 (diff | hist) . . (+3,624) . . Task 6: Sequence-based mutation analysis (→PSSM)
- 16:04, 24 June 2011 (diff | hist) . . (+111,638) . . Task 6: Sequence-based mutation analysis (→PSSM)
- 15:40, 24 June 2011 (diff | hist) . . (+2,351) . . Task 6: Sequence-based mutation analysis (→PAM 1/250 matrix)
- 15:28, 24 June 2011 (diff | hist) . . (+2,426) . . Task 6: Sequence-based mutation analysis (→PAM 1/250 matrix)
- 15:06, 24 June 2011 (diff | hist) . . (0) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 15:06, 24 June 2011 (diff | hist) . . (+12) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 15:05, 24 June 2011 (diff | hist) . . (-1) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 15:04, 24 June 2011 (diff | hist) . . (+115) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 15:02, 24 June 2011 (diff | hist) . . (+250) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 14:39, 24 June 2011 (diff | hist) . . (0) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 14:39, 24 June 2011 (diff | hist) . . (+9) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 14:38, 24 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 14:37, 24 June 2011 (diff | hist) . . (+52) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 14:35, 24 June 2011 (diff | hist) . . (+31) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 13:52, 24 June 2011 (diff | hist) . . (+18) . . Task 6: Sequence-based mutation analysis
- 13:51, 24 June 2011 (diff | hist) . . (+3) . . Task 6: Sequence-based mutation analysis (→Predicting the effect of mutations with SNAP, SIFT, Polyphen2)
- 13:50, 24 June 2011 (diff | hist) . . (+265) . . Task 6: Sequence-based mutation analysis
- 13:45, 24 June 2011 (diff | hist) . . (+230) . . Task 6: Sequence-based mutation analysis
- 13:38, 24 June 2011 (diff | hist) . . (+368) . . Task 6: Sequence-based mutation analysis
- 13:12, 24 June 2011 (diff | hist) . . (+195) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 11:40, 24 June 2011 (diff | hist) . . (+6) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 11:39, 24 June 2011 (diff | hist) . . (+225) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 18:58, 23 June 2011 (diff | hist) . . (-118) . . Task 6: Sequence-based mutation analysis
- 16:08, 23 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 16:08, 23 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 16:07, 23 June 2011 (diff | hist) . . (-466) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 16:04, 23 June 2011 (diff | hist) . . (0) . . N File:Encrypted img.png (current)
- 15:55, 23 June 2011 (diff | hist) . . (-13) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 15:55, 23 June 2011 (diff | hist) . . (+1,367) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 14:36, 23 June 2011 (diff | hist) . . (+26) . . Task 6: Sequence-based mutation analysis
- 14:35, 23 June 2011 (diff | hist) . . (+116) . . N Task 6: Sequence-based mutation analysis (Created page with "== Task description == A detailed task description can be found here.")
- 14:16, 23 June 2011 (diff | hist) . . (+47) . . Phenylketonuria 2011 (→Tasks)
- 11:50, 21 June 2011 (diff | hist) . . (+32) . . Task 5 - Mapping SNPs 2011 (→Introductory talks)
- 11:49, 21 June 2011 (diff | hist) . . (+93) . . N File:Biological Databases.pdf (First part of the presentation from the 21st of June 2011. Outline: * DSSP * HSSP * UniProt) (current)
- 12:29, 19 June 2011 (diff | hist) . . (+1,294) . . Task 5: Mapping point mutations (→dbSNP)
- 11:43, 19 June 2011 (diff | hist) . . (+3) . . Task 5: Mapping point mutations (→dbSNP)
- 11:42, 19 June 2011 (diff | hist) . . (+493) . . Task 5: Mapping point mutations (→dbSNP)
- 10:34, 19 June 2011 (diff | hist) . . (+387) . . Task 5: Mapping point mutations (→Discussion)
- 10:21, 19 June 2011 (diff | hist) . . (+18) . . Task 5: Mapping point mutations (→Processing Data)
- 22:43, 16 June 2011 (diff | hist) . . (0) . . Task 5: Mapping point mutations (→SNPdb)
- 22:43, 16 June 2011 (diff | hist) . . (+429) . . Task 5: Mapping point mutations (→SNPdb)
- 22:20, 16 June 2011 (diff | hist) . . (+6) . . DbSNP Silent Mutations Parser (current)
- 22:18, 16 June 2011 (diff | hist) . . (+16) . . DbSNP Silent Mutations Parser
- 22:14, 16 June 2011 (diff | hist) . . (+15) . . DbSNP Silent Mutations Parser
- 22:10, 16 June 2011 (diff | hist) . . (-15) . . DbSNP Silent Mutations Parser
- 22:10, 16 June 2011 (diff | hist) . . (+3,050) . . N DbSNP Silent Mutations Parser (Created page with "<code> #!/usr/bin/perl if ($#ARGV < 2){ print "wrong arguments!\n"; exit(); } $out_format=$ARGV[0]; $inFile = $ARGV[1]; $mRNA_fasta = $ARGV[2]; if ($out_format ne "list" &…")
- 22:08, 16 June 2011 (diff | hist) . . (+1,328) . . Task 5: Mapping point mutations (→Processing Data)
- 21:46, 16 June 2011 (diff | hist) . . (+1) . . Task 5: Mapping point mutations (→Results)
- 21:46, 16 June 2011 (diff | hist) . . (+633) . . Task 5: Mapping point mutations (→Methodology)
- 20:08, 16 June 2011 (diff | hist) . . (+6) . . Task 5: Mapping point mutations (→Retrieving Data)
- 20:06, 16 June 2011 (diff | hist) . . (+93) . . Task 5: Mapping point mutations (→Methodology)
- 20:02, 16 June 2011 (diff | hist) . . (+935) . . Task 5: Mapping point mutations (→Methodology)
- 19:44, 16 June 2011 (diff | hist) . . (0) . . N File:Silent mutations.png (current)
- 19:25, 16 June 2011 (diff | hist) . . (+224) . . Task 5: Mapping point mutations (→Methodology)
- 19:09, 16 June 2011 (diff | hist) . . (+1,120) . . Task 5: Mapping point mutations (→SNPdb)
- 22:35, 15 June 2011 (diff | hist) . . (0) . . How to search dbSNP (current)
- 22:33, 15 June 2011 (diff | hist) . . (+491) . . N How to search dbSNP (Created page with "To search for silent mutations for your Protein in dbSNP it is useful to filter the results already in the query. This can be done with a simple concatenation of restraints which…")
- 22:28, 15 June 2011 (diff | hist) . . (+33) . . Task 5 - Mapping SNPs 2011 (→Example: Cystic fibrosis)
- 20:02, 14 June 2011 (diff | hist) . . (+678) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 19:54, 14 June 2011 (diff | hist) . . (+263) . . Task 4: Homology based structure predictions (→Discussion)
- 19:51, 14 June 2011 (diff | hist) . . (+189) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 19:37, 14 June 2011 (diff | hist) . . (+145) . . Task 4: Homology based structure predictions (→Discussion)
- 19:34, 14 June 2011 (diff | hist) . . (0) . . N File:3top.png (current)
- 19:06, 14 June 2011 (diff | hist) . . (+11) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 18:01, 14 June 2011 (diff | hist) . . (+1,524) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 17:21, 14 June 2011 (diff | hist) . . (+520) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 16:53, 14 June 2011 (diff | hist) . . (+375) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 16:34, 14 June 2011 (diff | hist) . . (+1,140) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 14:51, 14 June 2011 (diff | hist) . . (+2) . . Task 4: Homology based structure predictions (→Swissmodel)
- 14:50, 14 June 2011 (diff | hist) . . (+1,548) . . Task 4: Homology based structure predictions (→Swissmodel)
- 14:44, 14 June 2011 (diff | hist) . . (+67) . . Task 4: Homology based structure predictions (→Discussion)
- 14:27, 14 June 2011 (diff | hist) . . (+1) . . Task 4: Homology based structure predictions (→Values)
- 14:22, 14 June 2011 (diff | hist) . . (+2,675) . . Task 4: Homology based structure predictions (→Swissmodel)
- 13:16, 14 June 2011 (diff | hist) . . (+1,553) . . Task 4: Homology based structure predictions (→Swissmodel)
- 23:02, 13 June 2011 (diff | hist) . . (+9) . . Task 4: Homology based structure predictions (→Description of the quantitative Modeller scores)
- 23:01, 13 June 2011 (diff | hist) . . (+1,229) . . Task 4: Homology based structure predictions (→Numeric evaluation of the calculated models)
- 19:39, 13 June 2011 (diff | hist) . . (-1) . . Task 4: Homology based structure predictions (→Modeller)
- 16:32, 13 June 2011 (diff | hist) . . (+107) . . Task 4: Homology based structure predictions (→Search)
- 20:15, 6 June 2011 (diff | hist) . . (0) . . Task 3: Sequence-based predictions (→BACR_HALSA)
- 22:22, 4 June 2011 (diff | hist) . . (0) . . Task 4: Homology based structure predictions (→Standard workflow)
- 18:10, 3 June 2011 (diff | hist) . . (+14) . . Task 4: Homology based structure predictions (→Standard Workflow)
- 17:34, 3 June 2011 (diff | hist) . . (+7) . . Task 4: Homology based structure predictions (→Standard Workflow)
- 17:27, 3 June 2011 (diff | hist) . . (+7) . . Task 4: Homology based structure predictions (→Standard Workflow)
- 17:14, 3 June 2011 (diff | hist) . . (+7) . . Task 4: Homology based structure predictions (→Standard Workflow)
- 17:00, 3 June 2011 (diff | hist) . . (+997) . . Task 4: Homology based structure predictions (→Swissmodel)
- 13:30, 3 June 2011 (diff | hist) . . (+1,183) . . Task 4: Homology based structure predictions (→Swissmodel)
- 13:30, 3 June 2011 (diff | hist) . . (0) . . N File:1ltz local model quality estimation anolea qmean gromos.png (current)
- 13:29, 3 June 2011 (diff | hist) . . (0) . . N File:1ltz QMEAN plots energy profile plots Batch.1.short.pdb local energy profile QMEANlocal.png (current)
- 13:28, 3 June 2011 (diff | hist) . . (0) . . N File:1ltz residue error pdb plot.jpeg (current)
- 13:27, 3 June 2011 (diff | hist) . . (0) . . N File:1 ltz QMEAN plots Batch.1.short.pdb plot.png slider.png (current)
- 13:27, 3 June 2011 (diff | hist) . . (0) . . N File:1 ltz QMEAN plots Batch.1.short.pdb plot.png density plot.png (current)
- 13:27, 3 June 2011 (diff | hist) . . (0) . . N File:1ltz QMEAN plots Batch.1.short.pdb plot.png (current)
- 13:15, 3 June 2011 (diff | hist) . . (+1,179) . . Task 4: Homology based structure predictions (→Swissmodel)
- 13:13, 3 June 2011 (diff | hist) . . (0) . . N File:1toh local mode quality estimation anolea qmean gromos.png (current)
- 13:13, 3 June 2011 (diff | hist) . . (0) . . N File:1toh QMEAN plots energy profile plots Batch.1.short.pdb local energy profile QMEANlocal.png (current)
- 13:12, 3 June 2011 (diff | hist) . . (0) . . N File:1toh residue error structure.jpeg (current)
- 13:12, 3 June 2011 (diff | hist) . . (0) . . N File:1toh QMEAN plots Batch.1.short.pdb plot.png slider.png (current)
- 13:11, 3 June 2011 (diff | hist) . . (0) . . N File:1toh QMEAN plots Batch.1.short.pdb plot.png density plot.png (current)
- 13:11, 3 June 2011 (diff | hist) . . (0) . . N File:1toh QMEAN plots Batch.1.short.pdb plot.png (current)
- 13:05, 3 June 2011 (diff | hist) . . (+11) . . Task 4: Homology based structure predictions (→Selection of the reference structures)
- 13:04, 3 June 2011 (diff | hist) . . (+476) . . Task 4: Homology based structure predictions (→Numeric evaluation of the calculated models)
- 13:04, 3 June 2011 (diff | hist) . . (0) . . N File:Local quality estimation 1phz template annolea qmean gromos.png (current)
- 12:56, 3 June 2011 (diff | hist) . . (+266) . . Task 4: Homology based structure predictions (→Numeric evaluation of the calculated models)
- 12:56, 3 June 2011 (diff | hist) . . (0) . . N File:QMEAN plots energy profile plots 1phz template.pdb local energy profile QMEANlocal.png (current)
- 12:49, 3 June 2011 (diff | hist) . . (0) . . N File:1phz template coloring by residue error.jpeg (current)
- 12:47, 3 June 2011 (diff | hist) . . (+17) . . Task 4: Homology based structure predictions (→Numeric evaluation of the calculated models)
- 12:45, 3 June 2011 (diff | hist) . . (+414) . . Task 4: Homology based structure predictions (→Numeric evaluation of the calculated models)
- 12:45, 3 June 2011 (diff | hist) . . (0) . . N File:QMEAN plots 1phz template plot.png slider.png (current)
- 12:44, 3 June 2011 (diff | hist) . . (0) . . N File:QMEAN plots 1phz template pdb plot.png density plot.png (current)
- 12:43, 3 June 2011 (diff | hist) . . (0) . . N File:QMEAN plots 1phz template.pdb plot.png (current)
- 12:15, 3 June 2011 (diff | hist) . . (+380) . . Task 4: Homology based structure predictions (→Swissmodel)
- 10:56, 3 June 2011 (diff | hist) . . (+138) . . Task 4: Homology based structure predictions (→Comparison to experimental structure)
- 21:19, 2 June 2011 (diff | hist) . . (+165) . . Task 4: Homology based structure predictions (→Swissmodel)
- 20:34, 2 June 2011 (diff | hist) . . (+11) . . Task 4: Homology based structure predictions (→Swissmodel)
- 20:33, 2 June 2011 (diff | hist) . . (+425) . . Task 4: Homology based structure predictions (→Comparison to experimental structure)
- 20:20, 2 June 2011 (diff | hist) . . (+18) . . Task 4: Homology based structure predictions (→Homology modelling with Swissmodel)
- 20:19, 2 June 2011 (diff | hist) . . (+120) . . Task 4: Homology based structure predictions (→Homology modelling with Swissmodel)
- 20:19, 2 June 2011 (diff | hist) . . (0) . . N File:1ltz A template auto model.png (current)
- 20:18, 2 June 2011 (diff | hist) . . (0) . . N File:1toh A template auto model.png (current)
- 20:18, 2 June 2011 (diff | hist) . . (0) . . N File:1phz A template auto model.png (current)
- 20:14, 2 June 2011 (diff | hist) . . (+745) . . Task 4: Homology based structure predictions (→Homology modelling with Swissmodel)
- 19:30, 2 June 2011 (diff | hist) . . (+163) . . Task 4: Homology based structure predictions (→Overview of available homologous structures)
- 19:25, 2 June 2011 (diff | hist) . . (+168) . . Task 4: Homology based structure predictions (→Overview of available homologous structures)
- 17:23, 2 June 2011 (diff | hist) . . (+30) . . Task 4: Homology based structure predictions (→Calculation of models)
- 17:22, 2 June 2011 (diff | hist) . . (+1,087) . . Task 4: Homology based structure predictions (→Calculation of models)
- 16:44, 2 June 2011 (diff | hist) . . (+313) . . Task 4: Homology based structure predictions (→Overview of available homologous structures)
- 16:03, 2 June 2011 (diff | hist) . . (+180) . . Task 4: Homology based structure predictions (→Calculation of models)
- 15:54, 2 June 2011 (diff | hist) . . (+258) . . Task 4: Homology based structure predictions (→Evaluate your models)
- 15:50, 2 June 2011 (diff | hist) . . (+1,778) . . Task 4: Homology based structure predictions (→Evaluate your models)
- 14:56, 2 June 2011 (diff | hist) . . (+58) . . Task 4: Homology based structure predictions
- 14:49, 2 June 2011 (diff | hist) . . (+103) . . N Task 4: Homology based structure predictions (Created page with "== Task description == The full description of this task can be found here.")
- 14:45, 2 June 2011 (diff | hist) . . (+51) . . Phenylketonuria 2011 (→Tasks)
- 18:16, 1 June 2011 (diff | hist) . . (+1,676) . . Task 3: Sequence-based predictions (→Results and discussion)
- 17:57, 1 June 2011 (diff | hist) . . (+78) . . Task 3: Sequence-based predictions (→Execution)
- 17:55, 1 June 2011 (diff | hist) . . (+1,722) . . Task 3: Sequence-based predictions (→Results and discussion)
- 17:35, 1 June 2011 (diff | hist) . . (+112) . . Task 3: Sequence-based predictions (→Execution)
- 17:34, 1 June 2011 (diff | hist) . . (+715) . . Task 3: Sequence-based predictions (→Results and discussion)
- 17:13, 1 June 2011 (diff | hist) . . (+109) . . Task 3: Sequence-based predictions (→Execution)
- 17:12, 1 June 2011 (diff | hist) . . (+960) . . Task 3: Sequence-based predictions (→Results and discussion)
- 17:05, 1 June 2011 (diff | hist) . . (+117) . . Task 3: Sequence-based predictions (→Execution)
- 17:03, 1 June 2011 (diff | hist) . . (+450) . . Task 3: Sequence-based predictions (→Results and discussion)
- 16:59, 1 June 2011 (diff | hist) . . (+541) . . Task 3: Sequence-based predictions (→Results and discussion)
- 16:55, 1 June 2011 (diff | hist) . . (+117) . . Task 3: Sequence-based predictions (→Execution)
- 16:54, 1 June 2011 (diff | hist) . . (+842) . . Task 3: Sequence-based predictions (→Results and discussion)
- 16:43, 1 June 2011 (diff | hist) . . (+117) . . Task 3: Sequence-based predictions (→Execution)
- 16:41, 1 June 2011 (diff | hist) . . (+673) . . Task 3: Sequence-based predictions (→PolyPhobius)
- 16:36, 1 June 2011 (diff | hist) . . (+153) . . Task 3: Sequence-based predictions (→Execution)
- 16:35, 1 June 2011 (diff | hist) . . (+649) . . Task 3: Sequence-based predictions (→Results and discussion)
- 16:22, 1 June 2011 (diff | hist) . . (+149) . . Task 3: Sequence-based predictions (→Execution)
- 16:20, 1 June 2011 (diff | hist) . . (+1,307) . . Task 3: Sequence-based predictions (→TMHMM)
- 21:36, 29 May 2011 (diff | hist) . . (+453) . . Task 3: Sequence-based predictions (→SignalP)
- 21:25, 29 May 2011 (diff | hist) . . (+579) . . Task 3: Sequence-based predictions (→TMHMM)
- 21:13, 29 May 2011 (diff | hist) . . (-1) . . Task 3: Sequence-based predictions (→RET4_HUMAN)