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- 17:46, 24 June 2011 (diff | hist) . . (0) . . N File:Polyphen input batch.png (current)
- 17:33, 24 June 2011 (diff | hist) . . (+40) . . Task 6: Sequence-based mutation analysis (→Polyphen2)
- 17:22, 24 June 2011 (diff | hist) . . (+479) . . Task 6: Sequence-based mutation analysis (→SIFT)
- 17:20, 24 June 2011 (diff | hist) . . (0) . . N File:Sift input.png (current)
- 16:24, 24 June 2011 (diff | hist) . . (+3,199) . . Task 6: Sequence-based mutation analysis (→Mutations and secondary structure)
- 16:09, 24 June 2011 (diff | hist) . . (+3,624) . . Task 6: Sequence-based mutation analysis (→PSSM)
- 16:04, 24 June 2011 (diff | hist) . . (+111,638) . . Task 6: Sequence-based mutation analysis (→PSSM)
- 15:40, 24 June 2011 (diff | hist) . . (+2,351) . . Task 6: Sequence-based mutation analysis (→PAM 1/250 matrix)
- 15:28, 24 June 2011 (diff | hist) . . (+2,426) . . Task 6: Sequence-based mutation analysis (→PAM 1/250 matrix)
- 15:06, 24 June 2011 (diff | hist) . . (0) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 15:06, 24 June 2011 (diff | hist) . . (+12) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 15:05, 24 June 2011 (diff | hist) . . (-1) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 15:04, 24 June 2011 (diff | hist) . . (+115) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 15:02, 24 June 2011 (diff | hist) . . (+250) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 14:39, 24 June 2011 (diff | hist) . . (0) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 14:39, 24 June 2011 (diff | hist) . . (+9) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 14:38, 24 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 14:37, 24 June 2011 (diff | hist) . . (+52) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 14:35, 24 June 2011 (diff | hist) . . (+31) . . Task 6: Sequence-based mutation analysis (→BLOSUM 62 matrix)
- 13:52, 24 June 2011 (diff | hist) . . (+18) . . Task 6: Sequence-based mutation analysis
- 13:51, 24 June 2011 (diff | hist) . . (+3) . . Task 6: Sequence-based mutation analysis (→Predicting the effect of mutations with SNAP, SIFT, Polyphen2)
- 13:50, 24 June 2011 (diff | hist) . . (+265) . . Task 6: Sequence-based mutation analysis
- 13:45, 24 June 2011 (diff | hist) . . (+230) . . Task 6: Sequence-based mutation analysis
- 13:38, 24 June 2011 (diff | hist) . . (+368) . . Task 6: Sequence-based mutation analysis
- 13:12, 24 June 2011 (diff | hist) . . (+195) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 11:40, 24 June 2011 (diff | hist) . . (+6) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 11:39, 24 June 2011 (diff | hist) . . (+225) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 18:58, 23 June 2011 (diff | hist) . . (-118) . . Task 6: Sequence-based mutation analysis
- 16:08, 23 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 16:08, 23 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 16:07, 23 June 2011 (diff | hist) . . (-466) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 16:04, 23 June 2011 (diff | hist) . . (0) . . N File:Encrypted img.png (current)
- 15:55, 23 June 2011 (diff | hist) . . (-13) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 15:55, 23 June 2011 (diff | hist) . . (+1,367) . . Task 6: Sequence-based mutation analysis (→Mutation selection)
- 14:36, 23 June 2011 (diff | hist) . . (+26) . . Task 6: Sequence-based mutation analysis
- 14:35, 23 June 2011 (diff | hist) . . (+116) . . N Task 6: Sequence-based mutation analysis (Created page with "== Task description == A detailed task description can be found here.")
- 14:16, 23 June 2011 (diff | hist) . . (+47) . . Phenylketonuria 2011 (→Tasks)
- 11:50, 21 June 2011 (diff | hist) . . (+32) . . Task 5 - Mapping SNPs 2011 (→Introductory talks)
- 11:49, 21 June 2011 (diff | hist) . . (+93) . . N File:Biological Databases.pdf (First part of the presentation from the 21st of June 2011. Outline: * DSSP * HSSP * UniProt) (current)
- 12:29, 19 June 2011 (diff | hist) . . (+1,294) . . Task 5: Mapping point mutations (→dbSNP)
- 11:43, 19 June 2011 (diff | hist) . . (+3) . . Task 5: Mapping point mutations (→dbSNP)
- 11:42, 19 June 2011 (diff | hist) . . (+493) . . Task 5: Mapping point mutations (→dbSNP)
- 10:34, 19 June 2011 (diff | hist) . . (+387) . . Task 5: Mapping point mutations (→Discussion)
- 10:21, 19 June 2011 (diff | hist) . . (+18) . . Task 5: Mapping point mutations (→Processing Data)
- 22:43, 16 June 2011 (diff | hist) . . (0) . . Task 5: Mapping point mutations (→SNPdb)
- 22:43, 16 June 2011 (diff | hist) . . (+429) . . Task 5: Mapping point mutations (→SNPdb)
- 22:20, 16 June 2011 (diff | hist) . . (+6) . . DbSNP Silent Mutations Parser (current)
- 22:18, 16 June 2011 (diff | hist) . . (+16) . . DbSNP Silent Mutations Parser
- 22:14, 16 June 2011 (diff | hist) . . (+15) . . DbSNP Silent Mutations Parser
- 22:10, 16 June 2011 (diff | hist) . . (-15) . . DbSNP Silent Mutations Parser
- 22:10, 16 June 2011 (diff | hist) . . (+3,050) . . N DbSNP Silent Mutations Parser (Created page with "<code> #!/usr/bin/perl if ($#ARGV < 2){ print "wrong arguments!\n"; exit(); } $out_format=$ARGV[0]; $inFile = $ARGV[1]; $mRNA_fasta = $ARGV[2]; if ($out_format ne "list" &…")
- 22:08, 16 June 2011 (diff | hist) . . (+1,328) . . Task 5: Mapping point mutations (→Processing Data)
- 21:46, 16 June 2011 (diff | hist) . . (+1) . . Task 5: Mapping point mutations (→Results)
- 21:46, 16 June 2011 (diff | hist) . . (+633) . . Task 5: Mapping point mutations (→Methodology)
- 20:08, 16 June 2011 (diff | hist) . . (+6) . . Task 5: Mapping point mutations (→Retrieving Data)
- 20:06, 16 June 2011 (diff | hist) . . (+93) . . Task 5: Mapping point mutations (→Methodology)
- 20:02, 16 June 2011 (diff | hist) . . (+935) . . Task 5: Mapping point mutations (→Methodology)
- 19:44, 16 June 2011 (diff | hist) . . (0) . . N File:Silent mutations.png (current)
- 19:25, 16 June 2011 (diff | hist) . . (+224) . . Task 5: Mapping point mutations (→Methodology)
- 19:09, 16 June 2011 (diff | hist) . . (+1,120) . . Task 5: Mapping point mutations (→SNPdb)
- 22:35, 15 June 2011 (diff | hist) . . (0) . . How to search dbSNP (current)
- 22:33, 15 June 2011 (diff | hist) . . (+491) . . N How to search dbSNP (Created page with "To search for silent mutations for your Protein in dbSNP it is useful to filter the results already in the query. This can be done with a simple concatenation of restraints which…")
- 22:28, 15 June 2011 (diff | hist) . . (+33) . . Task 5 - Mapping SNPs 2011 (→Example: Cystic fibrosis)
- 20:02, 14 June 2011 (diff | hist) . . (+678) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 19:54, 14 June 2011 (diff | hist) . . (+263) . . Task 4: Homology based structure predictions (→Discussion)
- 19:51, 14 June 2011 (diff | hist) . . (+189) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 19:37, 14 June 2011 (diff | hist) . . (+145) . . Task 4: Homology based structure predictions (→Discussion)
- 19:34, 14 June 2011 (diff | hist) . . (0) . . N File:3top.png (current)
- 19:06, 14 June 2011 (diff | hist) . . (+11) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 18:01, 14 June 2011 (diff | hist) . . (+1,524) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 17:21, 14 June 2011 (diff | hist) . . (+520) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 16:53, 14 June 2011 (diff | hist) . . (+375) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 16:34, 14 June 2011 (diff | hist) . . (+1,140) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 14:51, 14 June 2011 (diff | hist) . . (+2) . . Task 4: Homology based structure predictions (→Swissmodel)
- 14:50, 14 June 2011 (diff | hist) . . (+1,548) . . Task 4: Homology based structure predictions (→Swissmodel)
- 14:44, 14 June 2011 (diff | hist) . . (+67) . . Task 4: Homology based structure predictions (→Discussion)
- 14:27, 14 June 2011 (diff | hist) . . (+1) . . Task 4: Homology based structure predictions (→Values)
- 14:22, 14 June 2011 (diff | hist) . . (+2,675) . . Task 4: Homology based structure predictions (→Swissmodel)
- 13:16, 14 June 2011 (diff | hist) . . (+1,553) . . Task 4: Homology based structure predictions (→Swissmodel)
- 23:02, 13 June 2011 (diff | hist) . . (+9) . . Task 4: Homology based structure predictions (→Description of the quantitative Modeller scores)
- 23:01, 13 June 2011 (diff | hist) . . (+1,229) . . Task 4: Homology based structure predictions (→Numeric evaluation of the calculated models)
- 19:39, 13 June 2011 (diff | hist) . . (-1) . . Task 4: Homology based structure predictions (→Modeller)
- 16:32, 13 June 2011 (diff | hist) . . (+107) . . Task 4: Homology based structure predictions (→Search)
- 20:15, 6 June 2011 (diff | hist) . . (0) . . Task 3: Sequence-based predictions (→BACR_HALSA)
- 22:22, 4 June 2011 (diff | hist) . . (0) . . Task 4: Homology based structure predictions (→Standard workflow)
- 18:10, 3 June 2011 (diff | hist) . . (+14) . . Task 4: Homology based structure predictions (→Standard Workflow)
- 17:34, 3 June 2011 (diff | hist) . . (+7) . . Task 4: Homology based structure predictions (→Standard Workflow)
- 17:27, 3 June 2011 (diff | hist) . . (+7) . . Task 4: Homology based structure predictions (→Standard Workflow)
- 17:14, 3 June 2011 (diff | hist) . . (+7) . . Task 4: Homology based structure predictions (→Standard Workflow)
- 17:00, 3 June 2011 (diff | hist) . . (+997) . . Task 4: Homology based structure predictions (→Swissmodel)
- 13:30, 3 June 2011 (diff | hist) . . (+1,183) . . Task 4: Homology based structure predictions (→Swissmodel)
- 13:30, 3 June 2011 (diff | hist) . . (0) . . N File:1ltz local model quality estimation anolea qmean gromos.png (current)
- 13:29, 3 June 2011 (diff | hist) . . (0) . . N File:1ltz QMEAN plots energy profile plots Batch.1.short.pdb local energy profile QMEANlocal.png (current)
- 13:28, 3 June 2011 (diff | hist) . . (0) . . N File:1ltz residue error pdb plot.jpeg (current)
- 13:27, 3 June 2011 (diff | hist) . . (0) . . N File:1 ltz QMEAN plots Batch.1.short.pdb plot.png slider.png (current)
- 13:27, 3 June 2011 (diff | hist) . . (0) . . N File:1 ltz QMEAN plots Batch.1.short.pdb plot.png density plot.png (current)
- 13:27, 3 June 2011 (diff | hist) . . (0) . . N File:1ltz QMEAN plots Batch.1.short.pdb plot.png (current)
- 13:15, 3 June 2011 (diff | hist) . . (+1,179) . . Task 4: Homology based structure predictions (→Swissmodel)
- 13:13, 3 June 2011 (diff | hist) . . (0) . . N File:1toh local mode quality estimation anolea qmean gromos.png (current)
- 13:13, 3 June 2011 (diff | hist) . . (0) . . N File:1toh QMEAN plots energy profile plots Batch.1.short.pdb local energy profile QMEANlocal.png (current)