User contributions
From Bioinformatikpedia
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- 15:46, 29 September 2011 (diff | hist) . . (0) . . File:PAH P281L clusters.png (uploaded a new version of "File:PAH P281L clusters.png") (current)
- 15:44, 29 September 2011 (diff | hist) . . (0) . . File:PAH R408W clusters.png (uploaded a new version of "File:PAH R408W clusters.png") (current)
- 15:42, 29 September 2011 (diff | hist) . . (-173) . . Task 10: Molecular Dynamics Analysis (→VISUALIZATION OF RESULTS) (current)
- 15:41, 29 September 2011 (diff | hist) . . (0) . . N File:PAH R408W Movie.gif (current)
- 15:40, 29 September 2011 (diff | hist) . . (0) . . Task 10: Molecular Dynamics Analysis (→VISUALIZATION OF RESULTS)
- 15:39, 29 September 2011 (diff | hist) . . (-173) . . Task 10: Molecular Dynamics Analysis (→VISUALIZATION OF RESULTS)
- 15:36, 29 September 2011 (diff | hist) . . (0) . . N File:PAH P281L Movie.gif (current)
- 18:20, 26 September 2011 (diff | hist) . . (-426) . . Task 10: Molecular Dynamics Analysis (→Cluster analysis)
- 18:15, 26 September 2011 (diff | hist) . . (0) . . File:PAH P281L cluster transitions.png (uploaded a new version of "File:PAH P281L cluster transitions.png") (current)
- 18:13, 26 September 2011 (diff | hist) . . (+729) . . Task 10: Molecular Dynamics Analysis (→RMSD matrix)
- 18:00, 26 September 2011 (diff | hist) . . (+323) . . Task 10: Molecular Dynamics Analysis (→RAMACHANDRAN (PHI/PSI) PLOTS)
- 17:41, 26 September 2011 (diff | hist) . . (+64) . . Task 10: Molecular Dynamics Analysis (→HYDROGEN BONDS)
- 17:39, 26 September 2011 (diff | hist) . . (+53) . . Task 10: Molecular Dynamics Analysis (→SOLVENT ACCESSIBLE SURFACE AREA)
- 17:37, 26 September 2011 (diff | hist) . . (+306) . . Task 10: Molecular Dynamics Analysis (→CONVERGENCE OF RADIUS OF GYRATION)
- 17:32, 26 September 2011 (diff | hist) . . (+106) . . Task 10: Molecular Dynamics Analysis (→ROOT MEAN SQUARE FLUCTUATIONS)
- 17:28, 26 September 2011 (diff | hist) . . (+1) . . Task 10: Molecular Dynamics Analysis (→MINIMUM DISTANCES BETWEEN PERIODIC IMAGES)
- 17:28, 26 September 2011 (diff | hist) . . (-927) . . Task 10: Molecular Dynamics Analysis (→MINIMUM DISTANCES BETWEEN PERIODIC IMAGES)
- 17:26, 26 September 2011 (diff | hist) . . (-9) . . Task 10: Molecular Dynamics Analysis (→MINIMUM DISTANCES BETWEEN PERIODIC IMAGES)
- 17:24, 26 September 2011 (diff | hist) . . (+314) . . Task 10: Molecular Dynamics Analysis (→Potential Energy over Time)
- 17:21, 26 September 2011 (diff | hist) . . (+235) . . Task 10: Molecular Dynamics Analysis (→Pressure over Time)
- 17:19, 26 September 2011 (diff | hist) . . (+282) . . Task 10: Molecular Dynamics Analysis (→Temperature Over Time)
- 17:11, 26 September 2011 (diff | hist) . . (+54) . . Task 10: Molecular Dynamics Analysis (→A BRIEF CHECK OF RESULTS)
- 19:40, 24 September 2011 (diff | hist) . . (+208) . . Task 10: Molecular Dynamics Analysis (→Cluster analysis)
- 19:37, 24 September 2011 (diff | hist) . . (+218) . . Task 10: Molecular Dynamics Analysis (→Cluster analysis)
- 19:33, 24 September 2011 (diff | hist) . . (+652) . . Task 10: Molecular Dynamics Analysis (→RMSD matrix)
- 19:20, 24 September 2011 (diff | hist) . . (+722) . . Task 10: Molecular Dynamics Analysis (→RAMACHANDRAN (PHI/PSI) PLOTS)
- 19:01, 24 September 2011 (diff | hist) . . (0) . . Task 10: Molecular Dynamics Analysis (→RAMACHANDRAN (PHI/PSI) PLOTS)
- 19:01, 24 September 2011 (diff | hist) . . (0) . . Task 10: Molecular Dynamics Analysis (→RAMACHANDRAN (PHI/PSI) PLOTS)
- 18:55, 24 September 2011 (diff | hist) . . (+149) . . Task 10: Molecular Dynamics Analysis (→RAMACHANDRAN (PHI/PSI) PLOTS)
- 18:54, 24 September 2011 (diff | hist) . . (+149) . . Task 10: Molecular Dynamics Analysis (→RAMACHANDRAN (PHI/PSI) PLOTS)
- 18:52, 24 September 2011 (diff | hist) . . (0) . . N File:PAH NATIVE ramachandran PRO 281.png (current)
- 18:51, 24 September 2011 (diff | hist) . . (0) . . N File:PAH NATIVE ramachandran ARG 408.png (current)
- 18:47, 24 September 2011 (diff | hist) . . (+296) . . Task 10: Molecular Dynamics Analysis (→RAMACHANDRAN (PHI/PSI) PLOTS)
- 18:47, 24 September 2011 (diff | hist) . . (0) . . N File:PAH R408W ramachandran TRP 408.png (current)
- 18:45, 24 September 2011 (diff | hist) . . (0) . . N File:PAH R408W ramachandran complete.png (current)
- 18:44, 24 September 2011 (diff | hist) . . (+296) . . Task 10: Molecular Dynamics Analysis (→RAMACHANDRAN (PHI/PSI) PLOTS)
- 18:43, 24 September 2011 (diff | hist) . . (0) . . N File:PAH P281L ramachandran LEU 281.png (current)
- 18:41, 24 September 2011 (diff | hist) . . (0) . . N File:PAH P281L ramachandran complete.png (current)
- 18:11, 24 September 2011 (diff | hist) . . (+40) . . Task 10: Molecular Dynamics Analysis (→STRUCTURAL ANALYSIS: PROPERTIES DERIVED FROM CONFIGURATIONS)
- 18:11, 24 September 2011 (diff | hist) . . (+40) . . Task 10: Molecular Dynamics Analysis (→STRUCTURAL ANALYSIS: PROPERTIES DERIVED FROM CONFIGURATIONS)
- 18:10, 24 September 2011 (diff | hist) . . (+6) . . Task 10: Molecular Dynamics Analysis (→STRUCTURAL ANALYSIS: PROPERTIES DERIVED FROM CONFIGURATIONS)
- 18:09, 24 September 2011 (diff | hist) . . (+56) . . Task 10: Molecular Dynamics Analysis (→STRUCTURAL ANALYSIS: PROPERTIES DERIVED FROM CONFIGURATIONS)
- 19:17, 16 September 2011 (diff | hist) . . (-52) . . Task 10: Molecular Dynamics Analysis (→SALT BRIDGES)
- 19:17, 16 September 2011 (diff | hist) . . (-121) . . Task 10: Molecular Dynamics Analysis (→SALT BRIDGES)
- 19:17, 16 September 2011 (diff | hist) . . (+124) . . Task 10: Molecular Dynamics Analysis (→HYDROGEN BONDS)
- 19:15, 16 September 2011 (diff | hist) . . (+302) . . Task 10: Molecular Dynamics Analysis (→HYDROGEN BONDS)
- 19:09, 16 September 2011 (diff | hist) . . (+53) . . Task 10: Molecular Dynamics Analysis (→SOLVENT ACCESSIBLE SURFACE AREA)
- 19:06, 16 September 2011 (diff | hist) . . (+132) . . Task 10: Molecular Dynamics Analysis (→ROOT MEAN SQUARE FLUCTUATIONS)
- 19:04, 16 September 2011 (diff | hist) . . (+106) . . Task 10: Molecular Dynamics Analysis (→CONVERGENCE OF RADIUS OF GYRATION)
- 19:00, 16 September 2011 (diff | hist) . . (+271) . . Task 10: Molecular Dynamics Analysis (→CONVERGENCE OF RADIUS OF GYRATION)
- 18:53, 16 September 2011 (diff | hist) . . (+175) . . Task 10: Molecular Dynamics Analysis (→ROOT MEAN SQUARE FLUCTUATIONS)
- 18:12, 16 September 2011 (diff | hist) . . (-432) . . Task 10: Molecular Dynamics Analysis (→MINIMUM DISTANCES BETWEEN PERIODIC IMAGES)
- 18:02, 16 September 2011 (diff | hist) . . (-491) . . Task 10: Molecular Dynamics Analysis (→MINIMUM DISTANCES BETWEEN PERIODIC IMAGES)
- 17:59, 16 September 2011 (diff | hist) . . (0) . . Task 10: Molecular Dynamics Analysis (→CONVERGENCE OF ENERGY TERMS)
- 17:57, 16 September 2011 (diff | hist) . . (+237) . . Task 10: Molecular Dynamics Analysis (→Total Energy over Time)
- 17:53, 16 September 2011 (diff | hist) . . (+235) . . Task 10: Molecular Dynamics Analysis (→Pressure over Time)
- 17:49, 16 September 2011 (diff | hist) . . (+528) . . Task 10: Molecular Dynamics Analysis (→Temperature Over Time)
- 17:37, 16 September 2011 (diff | hist) . . (-52) . . Task 10: Molecular Dynamics Analysis (→HYDROGEN BONDS)
- 17:34, 16 September 2011 (diff | hist) . . (+99) . . Task 10: Molecular Dynamics Analysis (→RMSD matrix)
- 17:34, 16 September 2011 (diff | hist) . . (-186) . . Task 10: Molecular Dynamics Analysis (→Cluster analysis)
- 16:48, 16 September 2011 (diff | hist) . . (0) . . Task 10: Molecular Dynamics Analysis (→STRUCTURAL ANALYSIS: PROPERTIES DERIVED FROM CONFIGURATIONS)
- 16:36, 16 September 2011 (diff | hist) . . (-10) . . Task 10: Molecular Dynamics Analysis (→ROOT MEAN SQUARE FLUCTUATIONS)
- 16:35, 16 September 2011 (diff | hist) . . (+122) . . Task 10: Molecular Dynamics Analysis (→ROOT MEAN SQUARE FLUCTUATIONS)
- 16:33, 16 September 2011 (diff | hist) . . (0) . . N File:PAH P281L rmsf backbone per residue.png (current)
- 16:29, 16 September 2011 (diff | hist) . . (+123) . . Task 10: Molecular Dynamics Analysis (→ROOT MEAN SQUARE FLUCTUATIONS)
- 16:29, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W rmsf backbone per residue.png (current)
- 16:19, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W distance rmsd.png (current)
- 16:13, 16 September 2011 (diff | hist) . . (+12) . . Task 10: Molecular Dynamics Analysis (→R408W)
- 16:12, 16 September 2011 (diff | hist) . . (+18) . . Task 10: Molecular Dynamics Analysis (→P281L)
- 16:00, 16 September 2011 (diff | hist) . . (+4) . . Task 10: Molecular Dynamics Analysis (→MINIMUM DISTANCES BETWEEN PERIODIC IMAGES)
- 16:00, 16 September 2011 (diff | hist) . . (+7,291) . . Task 10: Molecular Dynamics Analysis (→R408W)
- 15:55, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W cluster transitions.png (current)
- 15:54, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W cluster sizes.png (current)
- 15:54, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W cluster id over time.png (current)
- 15:53, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W clusters.png
- 15:52, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W rmsd distribution.png (current)
- 15:39, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W rmsd-matrix.png (current)
- 15:30, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W hydrogen bonds protein water.png (current)
- 15:20, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W hydrogen bonds intra protein.png (current)
- 15:18, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W atomic sas.png (current)
- 15:17, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W residue sas.png (current)
- 15:16, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W solvent accessible surface.png (current)
- 15:15, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W Gyration.png (current)
- 15:14, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W rmsf per residue.png (current)
- 15:13, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W average vs bfactor.png (current)
- 14:54, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W minimal periodic ca distance.png (current)
- 13:52, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W minimal periodic distance.png (current)
- 13:51, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W potential energy.png (current)
- 13:50, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W total energy.png (current)
- 13:49, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W Pressure.png (current)
- 13:48, 16 September 2011 (diff | hist) . . (0) . . N File:PAH R408W Temperature.png (current)
- 13:41, 16 September 2011 (diff | hist) . . (+53) . . Task 10: Molecular Dynamics Analysis (→STRUCTURAL ANALYSIS: PROPERTIES DERIVED FROM CONFIGURATIONS)
- 13:39, 16 September 2011 (diff | hist) . . (0) . . N File:PAH P281L hydrogen bonds protein water.png (current)
- 18:55, 15 September 2011 (diff | hist) . . (+49) . . Task 10: Molecular Dynamics Analysis (→STRUCTURAL ANALYSIS: PROPERTIES DERIVED FROM CONFIGURATIONS)
- 18:53, 15 September 2011 (diff | hist) . . (+7,277) . . Task 10: Molecular Dynamics Analysis
- 18:52, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L distance rmsd.png (current)
- 18:47, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L cluster transitions.png
- 18:47, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L cluster sizes.png (current)
- 18:47, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L cluster id over time.png (current)
- 18:43, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L clusters.png
- 18:41, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L rmsd distribution.png (current)
- 18:36, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L rmsd-matrix.png (current)
- 18:32, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L hydrogen bonds intra protein.png (current)
- 18:30, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L residue sas.png (current)
- 18:29, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L atomic sas.png (current)
- 18:26, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L solvent accessible surface.png (current)
- 18:20, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L average vs bfactor.png (current)
- 18:19, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L rmsf per residue.png (current)
- 18:14, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L minimal periodic ca distance.png (current)
- 18:09, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L minimal periodic distance.png (current)
- 18:03, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L Gyration.png (current)
- 17:59, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L Potential Energy.png (current)
- 17:57, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L Total Energy.png (current)
- 17:55, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L Pressure.png (current)
- 17:53, 15 September 2011 (diff | hist) . . (0) . . N File:PAH P281L Temperature.png (current)
- 12:38, 30 August 2011 (diff | hist) . . (-12) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→Results) (current)
- 12:37, 30 August 2011 (diff | hist) . . (-30) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→Results)
- 12:36, 30 August 2011 (diff | hist) . . (+12) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→BLAST)
- 12:34, 30 August 2011 (diff | hist) . . (+6) . . Task 5: Mapping point mutations (→Methodology) (current)
- 12:27, 30 August 2011 (diff | hist) . . (+1) . . Task 4: Homology based structure predictions (→Discussion) (current)
- 12:26, 30 August 2011 (diff | hist) . . (+1) . . Task 4: Homology based structure predictions (→Qualitative comparison of the best models for each method)
- 12:19, 30 August 2011 (diff | hist) . . (+7) . . Task 4: Homology based structure predictions (→Discussion)
- 12:17, 30 August 2011 (diff | hist) . . (+3) . . Task 4: Homology based structure predictions (→3D-JigSaw)
- 12:16, 30 August 2011 (diff | hist) . . (+60) . . Task 4: Homology based structure predictions (→Discussion)
- 12:13, 30 August 2011 (diff | hist) . . (+2,686) . . Task 4: Homology based structure predictions (→3D-JigSaw)
- 11:59, 30 August 2011 (diff | hist) . . (+42) . . Task 4: Homology based structure predictions (→Swissmodel)
- 11:57, 30 August 2011 (diff | hist) . . (+7,165) . . Task 4: Homology based structure predictions (→Swissmodel)
- 10:37, 30 August 2011 (diff | hist) . . (+107) . . Task 4: Homology based structure predictions (→Homology modelling with iTasser)
- 10:24, 30 August 2011 (diff | hist) . . (+868) . . Task 4: Homology based structure predictions
- 10:11, 30 August 2011 (diff | hist) . . (+2) . . Task 3: Sequence-based predictions (→TMHMM) (current)
- 10:11, 30 August 2011 (diff | hist) . . (-2) . . Task 3: Sequence-based predictions (→TMHMM)
- 10:10, 30 August 2011 (diff | hist) . . (-2) . . Task 3: Sequence-based predictions (→Phobius)
- 10:01, 30 August 2011 (diff | hist) . . (+2) . . Task 3: Sequence-based predictions (→INSL5_HUMAN)
- 10:01, 30 August 2011 (diff | hist) . . (-2) . . Task 3: Sequence-based predictions (→INSL5_HUMAN)
- 09:59, 30 August 2011 (diff | hist) . . (+771) . . Task 3: Sequence-based predictions (→ProtFun 2.2)
- 09:56, 30 August 2011 (diff | hist) . . (+350) . . Task 3: Sequence-based predictions (→Pfam)
- 09:51, 30 August 2011 (diff | hist) . . (+181) . . Task 3: Sequence-based predictions (→GOPET)
- 09:49, 30 August 2011 (diff | hist) . . (+628) . . Task 3: Sequence-based predictions (→GOPET)
- 09:45, 30 August 2011 (diff | hist) . . (+17) . . Task 3: Sequence-based predictions (→GOPET)
- 09:43, 30 August 2011 (diff | hist) . . (+194) . . Task 3: Sequence-based predictions (→TargetP)
- 09:41, 30 August 2011 (diff | hist) . . (+197) . . Task 3: Sequence-based predictions (→TargetP)
- 09:38, 30 August 2011 (diff | hist) . . (+661) . . Task 3: Sequence-based predictions (→SPOCTOPUS)
- 09:33, 30 August 2011 (diff | hist) . . (+495) . . Task 3: Sequence-based predictions (→OCTOPUS)
- 09:29, 30 August 2011 (diff | hist) . . (+25) . . Task 3: Sequence-based predictions (→PolyPhobius)
- 09:28, 30 August 2011 (diff | hist) . . (+16) . . Task 3: Sequence-based predictions (→Phobius)
- 09:27, 30 August 2011 (diff | hist) . . (+8) . . Task 3: Sequence-based predictions (→Execution)
- 09:27, 30 August 2011 (diff | hist) . . (+9) . . Task 3: Sequence-based predictions (→Results and discussion)
- 09:27, 30 August 2011 (diff | hist) . . (+9) . . Task 3: Sequence-based predictions (→Execution)
- 23:11, 29 August 2011 (diff | hist) . . (+6) . . Task 3: Sequence-based predictions (→Execution)
- 23:11, 29 August 2011 (diff | hist) . . (-6) . . Task 3: Sequence-based predictions (→Execution)
- 23:09, 29 August 2011 (diff | hist) . . (+1) . . Task 3: Sequence-based predictions (→Execution)
- 23:09, 29 August 2011 (diff | hist) . . (+6) . . Task 3: Sequence-based predictions (→Execution)
- 23:08, 29 August 2011 (diff | hist) . . (0) . . Task 3: Sequence-based predictions (→PAH)
- 23:08, 29 August 2011 (diff | hist) . . (+78) . . Task 3: Sequence-based predictions (→PAH)
- 23:04, 29 August 2011 (diff | hist) . . (+21) . . Task 3: Sequence-based predictions (→Execution)
- 23:04, 29 August 2011 (diff | hist) . . (+67) . . Task 3: Sequence-based predictions (→Execution)
- 23:03, 29 August 2011 (diff | hist) . . (+16) . . Task 3: Sequence-based predictions (→Description)
- 23:01, 29 August 2011 (diff | hist) . . (+73) . . Task 3: Sequence-based predictions (→Results and discussion)
- 23:00, 29 August 2011 (diff | hist) . . (+64) . . Task 3: Sequence-based predictions (→Execution)
- 22:59, 29 August 2011 (diff | hist) . . (+7) . . Task 3: Sequence-based predictions (→Execution)
- 22:59, 29 August 2011 (diff | hist) . . (+7) . . Task 3: Sequence-based predictions (→Results and discussion)
- 22:58, 29 August 2011 (diff | hist) . . (+63) . . Task 3: Sequence-based predictions (→Results and discussion)
- 22:57, 29 August 2011 (diff | hist) . . (-18) . . Task 3: Sequence-based predictions (→Execution)
- 22:57, 29 August 2011 (diff | hist) . . (+5) . . Task 3: Sequence-based predictions (→Execution)
- 22:56, 29 August 2011 (diff | hist) . . (+66) . . Task 3: Sequence-based predictions (→Execution)
- 22:55, 29 August 2011 (diff | hist) . . (+16) . . Task 3: Sequence-based predictions (→Description)
- 22:54, 29 August 2011 (diff | hist) . . (+16) . . Task 3: Sequence-based predictions (→Description)
- 22:53, 29 August 2011 (diff | hist) . . (+5) . . Task 3: Sequence-based predictions (→Discussion)
- 22:53, 29 August 2011 (diff | hist) . . (+8) . . Task 3: Sequence-based predictions (→Discussion)
- 22:53, 29 August 2011 (diff | hist) . . (-1) . . Task 3: Sequence-based predictions (→Discussion)
- 22:51, 29 August 2011 (diff | hist) . . (+8) . . Task 3: Sequence-based predictions (→Discussion)
- 22:49, 29 August 2011 (diff | hist) . . (+128) . . Task 3: Sequence-based predictions (→Discussion)
- 22:45, 29 August 2011 (diff | hist) . . (+136) . . Task 3: Sequence-based predictions (→Discussion)
- 22:41, 29 August 2011 (diff | hist) . . (-1) . . Phenylketonuria 2011 (→Position of the mutations on the phenylalanine hydroxylase protein)
- 22:35, 29 August 2011 (diff | hist) . . (+2,113) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→Results and discussion)
- 22:23, 29 August 2011 (diff | hist) . . (+15) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→Results and discussion)
- 22:20, 29 August 2011 (diff | hist) . . (0) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→Running)
- 22:19, 29 August 2011 (diff | hist) . . (+62) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→Results)
- 22:17, 29 August 2011 (diff | hist) . . (+3,676) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→Results)
- 22:01, 29 August 2011 (diff | hist) . . (+2,001) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→PSI-BLAST)
- 21:52, 29 August 2011 (diff | hist) . . (+474) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→FASTA)
- 21:49, 29 August 2011 (diff | hist) . . (-240) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→Results)
- 21:48, 29 August 2011 (diff | hist) . . (+689) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→Results)
- 21:29, 29 August 2011 (diff | hist) . . (+98) . . Phenylketonuria 2011
- 10:12, 29 August 2011 (diff | hist) . . (+431) . . Task 9: Normal Mode Analysis (→Visualization of Normal Modes)
- 09:58, 29 August 2011 (diff | hist) . . (+349) . . Task 9: Normal Mode Analysis (→Visualization of Normal Modes)
- 09:48, 29 August 2011 (diff | hist) . . (+808) . . Task 9: Normal Mode Analysis (→Visualization of Normal Modes)
- 22:34, 24 August 2011 (diff | hist) . . (+1) . . Task 7: Structure-based mutation analysis (→R408W)
- 22:34, 24 August 2011 (diff | hist) . . (+1,340) . . Task 7: Structure-based mutation analysis (→R408W)
- 22:21, 24 August 2011 (diff | hist) . . (0) . . N File:PAH R408W int.png (current)
- 22:06, 24 August 2011 (diff | hist) . . (+327) . . Task 7: Structure-based mutation analysis (→G312D)
- 22:04, 24 August 2011 (diff | hist) . . (0) . . N File:PAH G312D int.png (current)
- 21:58, 24 August 2011 (diff | hist) . . (+1) . . Task 7: Structure-based mutation analysis (→P281L)
- 21:58, 24 August 2011 (diff | hist) . . (+714) . . Task 7: Structure-based mutation analysis (→P281L)
- 21:52, 24 August 2011 (diff | hist) . . (0) . . N File:P281L int.png (current)
- 21:46, 24 August 2011 (diff | hist) . . (+1) . . Task 7: Structure-based mutation analysis (→R261Q)
- 21:42, 24 August 2011 (diff | hist) . . (0) . . File:PAH R261Q interpretation.png (uploaded a new version of "File:PAH R261Q interpretation.png") (current)
- 21:38, 24 August 2011 (diff | hist) . . (+1,034) . . Task 7: Structure-based mutation analysis (→R261Q)
- 21:28, 24 August 2011 (diff | hist) . . (0) . . N File:PAH R261Q interpretation.png
- 21:59, 23 August 2011 (diff | hist) . . (+53) . . PAH Structure (current)
- 21:58, 23 August 2011 (diff | hist) . . (+185) . . PAH Structure (→References)
- 21:54, 23 August 2011 (diff | hist) . . (+98) . . PAH Structure (→Catalytic domain)
- 21:54, 23 August 2011 (diff | hist) . . (+6) . . PAH Structure (→Catalytic domain)
- 21:53, 23 August 2011 (diff | hist) . . (+27) . . PAH Structure (→Catalytic domain)
- 21:53, 23 August 2011 (diff | hist) . . (0) . . N File:PAH act site.jpeg (current)
- 21:50, 23 August 2011 (diff | hist) . . (+6) . . PAH Structure
- 21:50, 23 August 2011 (diff | hist) . . (+6) . . PAH Structure (→Domains)
- 21:50, 23 August 2011 (diff | hist) . . (+239) . . PAH Structure (→Domains)
- 21:49, 23 August 2011 (diff | hist) . . (0) . . N File:PAH Full Dom.jpeg (current)
- 21:47, 23 August 2011 (diff | hist) . . (+24) . . PAH Structure
- 21:46, 23 August 2011 (diff | hist) . . (0) . . N File:PAH Full.jpeg (current)
- 20:13, 23 August 2011 (diff | hist) . . (+1,112) . . PAH Structure (→Catalytic domain)
- 20:08, 23 August 2011 (diff | hist) . . (-282) . . PAH Structure (→C-terminal oligomerization domain)
- 19:58, 23 August 2011 (diff | hist) . . (-5) . . PAH Structure
- 19:57, 23 August 2011 (diff | hist) . . (+1,457) . . PAH Structure (→C-terminal oligomerization domain)
- 19:54, 23 August 2011 (diff | hist) . . (+1,382) . . PAH Structure (→Regulatory N-terminal domain)
- 19:30, 23 August 2011 (diff | hist) . . (+107) . . PAH Structure (→Domains)
- 19:29, 23 August 2011 (diff | hist) . . (-2) . . PAH Structure (→References)
- 19:28, 23 August 2011 (diff | hist) . . (+131) . . PAH Structure
- 19:23, 23 August 2011 (diff | hist) . . (+122) . . PAH Structure
- 19:21, 23 August 2011 (diff | hist) . . (+1,135) . . PAH Structure
- 19:21, 23 August 2011 (diff | hist) . . (0) . . N File:Pah hydroxylase.png (current)
- 19:00, 23 August 2011 (diff | hist) . . (+729) . . N PAH Structure (Created page with "Phenylalanine hydroxylase is an enzyme, which is necessary for the catalysis of phenylalanine to tyrosine. This catalysis is realized by hydroxylation of the aromatic side chain …")
- 18:56, 23 August 2011 (diff | hist) . . (0) . . N File:PAH overallreaction.png (current)
- 18:48, 23 August 2011 (diff | hist) . . (+94) . . Phenylketonuria 2011 (→The PAH gene)
- 16:02, 18 August 2011 (diff | hist) . . (-75) . . Task 4: Homology based structure predictions (→1ltz - sequence identity < 40 %)
- 15:53, 18 August 2011 (diff | hist) . . (0) . . Task 3: Sequence-based predictions (→Discussion)
- 15:52, 18 August 2011 (diff | hist) . . (+1,748) . . Task 3: Sequence-based predictions (→Discussion)
- 15:23, 18 August 2011 (diff | hist) . . (0) . . N File:1PHZ b factors.png (current)
- 21:14, 17 August 2011 (diff | hist) . . (-162) . . Task 4: Homology based structure predictions (→1ltz - sequence identity < 40 %)
- 21:11, 17 August 2011 (diff | hist) . . (+482) . . Task 3: Sequence-based predictions (→Discussion)
- 21:01, 17 August 2011 (diff | hist) . . (+65) . . Task 3: Sequence-based predictions (→Discussion)
- 20:59, 17 August 2011 (diff | hist) . . (+704) . . Task 3: Sequence-based predictions (→Discussion)
- 20:38, 17 August 2011 (diff | hist) . . (+25) . . Task 3: Sequence-based predictions (→Discussion)
- 20:36, 17 August 2011 (diff | hist) . . (+724) . . Task 3: Sequence-based predictions (→Task 3.1: Secondary structure prediction)
- 19:52, 17 August 2011 (diff | hist) . . (+1) . . Task 3: Sequence-based predictions (→Discussion)
- 19:51, 17 August 2011 (diff | hist) . . (+15) . . Task 3: Sequence-based predictions (→Discussion)
- 19:50, 17 August 2011 (diff | hist) . . (+2,193) . . Task 3: Sequence-based predictions (→Discussion)
- 18:49, 17 August 2011 (diff | hist) . . (0) . . N File:PAH B Factor.png (current)
- 18:44, 17 August 2011 (diff | hist) . . (+2) . . Task 9: Normal Mode Analysis (→B-Factor)
- 18:33, 17 August 2011 (diff | hist) . . (+7) . . HHSearch (→Basic Information) (current)
- 18:33, 17 August 2011 (diff | hist) . . (+1,014) . . N HHSearch (Created page with "==Basic Information== {| style="float: right; border: 1px solid #BBB; margin: .46em 0 0 .2em;" ! Author | Söding J. |- ! Year | 2005 |- ! Reference | [www.ncbi.nlm.nih.gov/pubm…")
- 17:51, 17 August 2011 (diff | hist) . . (-4) . . PSI-BLAST (→Basic Information) (current)
- 17:51, 17 August 2011 (diff | hist) . . (+7) . . PSI-BLAST
- 17:50, 17 August 2011 (diff | hist) . . (-129) . . PSI-BLAST
- 17:50, 17 August 2011 (diff | hist) . . (+1,539) . . N PSI-BLAST (Created page with "==Basic Information== (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucl. Acids Res., 25 (17), 3389-3402. {| style="float: right; bor…")
- 17:30, 17 August 2011 (diff | hist) . . (+3) . . FASTA (current)
- 17:30, 17 August 2011 (diff | hist) . . (+43) . . FASTA
- 17:29, 17 August 2011 (diff | hist) . . (+1,221) . . N FASTA (Created page with "==Basic Information== {| style="float: right; border: 1px solid #BBB; margin: .46em 0 0 .2em;" ! Author | David J. Lipman, William R. Pearson |- ! Year | 1985 |- ! Reference | […")
- 17:08, 17 August 2011 (diff | hist) . . (+14) . . BLAST (current)
- 17:06, 17 August 2011 (diff | hist) . . (+5) . . BLAST
- 17:06, 17 August 2011 (diff | hist) . . (-4) . . BLAST (→Basic Information)
- 17:06, 17 August 2011 (diff | hist) . . (+4) . . BLAST
- 17:05, 17 August 2011 (diff | hist) . . (+1,015) . . N BLAST (Created page with "==Basic Information== {| style="float: right; border: 1px solid #BBB; margin: .46em 0 0 .2em;" ! Author | Stephen Altschul, Warren Gish, David Lipman |- ! Year | 1990 |- ! Refer…")
- 16:46, 17 August 2011 (diff | hist) . . (+257) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→Task 2.1: Sequence searches)
- 16:31, 17 August 2011 (diff | hist) . . (+1,235) . . Task 2: Sequence alignments (sequence searches and multiple alignments) (→Task description)
- 16:14, 17 August 2011 (diff | hist) . . (+1,753) . . Task 2: Sequence alignments (sequence searches and multiple alignments)
- 15:43, 17 August 2011 (diff | hist) . . (+19) . . PAH R408W (current)
- 15:43, 17 August 2011 (diff | hist) . . (+19) . . PAH I65T (current)
- 15:43, 17 August 2011 (diff | hist) . . (+19) . . PAH R261Q (current)
- 15:42, 17 August 2011 (diff | hist) . . (+19) . . PAH P281L (current)
- 15:42, 17 August 2011 (diff | hist) . . (+19) . . PAH R158Q (current)
- 15:41, 17 August 2011 (diff | hist) . . (+17) . . PAH T278N (current)
- 15:41, 17 August 2011 (diff | hist) . . (+17) . . PAH P275S (current)
- 15:41, 17 August 2011 (diff | hist) . . (+17) . . PAH R71H (current)
- 15:39, 17 August 2011 (diff | hist) . . (+58) . . Phenylketonuria 2011
- 15:35, 17 August 2011 (diff | hist) . . (+606) . . N PAH R158Q (Created page with "== Source == If a mutation was annotated in HGMD to cause phenylketonuria, it was defined as disease causing. * [http://www.hgmd.cf.ac.uk/ac/gene.php?gene=PAH HGMD] == Literatur…")
- 15:34, 17 August 2011 (diff | hist) . . (-43) . . PAH R261Q
- 15:33, 17 August 2011 (diff | hist) . . (+644) . . N PAH R261Q (Created page with "== Source == If a mutation was annotated in HGMD to cause phenylketonuria, it was defined as disease causing. * [http://www.hgmd.cf.ac.uk/ac/gene.php?gene=PAH HGMD] == Literatur…")
- 15:32, 17 August 2011 (diff | hist) . . (+605) . . N PAH I65T (Created page with "== Source == If a mutation was annotated in HGMD to cause phenylketonuria, it was defined as disease causing. * [http://www.hgmd.cf.ac.uk/ac/gene.php?gene=PAH HGMD] == Literatur…")
- 15:31, 17 August 2011 (diff | hist) . . (+642) . . N PAH P281L (Created page with "== Source == If a mutation was annotated in HGMD to cause phenylketonuria, it was defined as disease causing. * [http://www.hgmd.cf.ac.uk/ac/gene.php?gene=PAH HGMD] == Literatur…")
- 15:31, 17 August 2011 (diff | hist) . . (+645) . . N PAH R408W (Created page with "== Source == If a mutation was annotated in HGMD to cause phenylketonuria, it was defined as disease causing. * [http://www.hgmd.cf.ac.uk/ac/gene.php?gene=PAH HGMD] == Literatur…")
- 15:24, 17 August 2011 (diff | hist) . . (+286) . . PAH T278N
- 15:22, 17 August 2011 (diff | hist) . . (+289) . . PAH P275S
- 15:21, 17 August 2011 (diff | hist) . . (+55) . . PAH R71H
- 15:20, 17 August 2011 (diff | hist) . . (-4) . . PAH R71H
- 15:19, 17 August 2011 (diff | hist) . . (+4) . . PAH R71H
- 15:15, 17 August 2011 (diff | hist) . . (-2) . . PAH R71H (→Literature)
- 15:15, 17 August 2011 (diff | hist) . . (+2) . . PAH R71H (→Literature)
- 15:15, 17 August 2011 (diff | hist) . . (+230) . . PAH R71H
- 15:11, 17 August 2011 (diff | hist) . . (+482) . . N PAH G312D (Created page with "== Source == If a mutation was not listed in HGMD but in dbSNP, it was defined as neutral. * [http://www.hgmd.cf.ac.uk/ac/gene.php?gene=PAH HGMD] * [http://www.ncbi.nlm.nih.gov/p…") (current)
- 15:10, 17 August 2011 (diff | hist) . . (+482) . . N PAH R71H (Created page with "== Source == If a mutation was not listed in HGMD but in dbSNP, it was defined as neutral. * [http://www.hgmd.cf.ac.uk/ac/gene.php?gene=PAH HGMD] * [http://www.ncbi.nlm.nih.gov/p…")
- 15:10, 17 August 2011 (diff | hist) . . (+482) . . N PAH P275S (Created page with "== Source == If a mutation was not listed in HGMD but in dbSNP, it was defined as neutral. * [http://www.hgmd.cf.ac.uk/ac/gene.php?gene=PAH HGMD] * [http://www.ncbi.nlm.nih.gov/p…")
- 15:10, 17 August 2011 (diff | hist) . . (+482) . . N PAH T266A (Created page with "== Source == If a mutation was not listed in HGMD but in dbSNP, it was defined as neutral. * [http://www.hgmd.cf.ac.uk/ac/gene.php?gene=PAH HGMD] * [http://www.ncbi.nlm.nih.gov/p…") (current)
- 15:10, 17 August 2011 (diff | hist) . . (+482) . . N PAH T278N (Created page with "== Source == If a mutation was not listed in HGMD but in dbSNP, it was defined as neutral. * [http://www.hgmd.cf.ac.uk/ac/gene.php?gene=PAH HGMD] * [http://www.ncbi.nlm.nih.gov/p…")
- 14:47, 17 August 2011 (diff | hist) . . (+48) . . Phenylketonuria 2011 (→Disease causing mutations)
- 14:45, 17 August 2011 (diff | hist) . . (+47) . . Phenylketonuria 2011 (→Neutral mutations)
- 13:39, 10 August 2011 (diff | hist) . . (+182) . . Task 10: Molecular Dynamics Analysis
- 13:36, 10 August 2011 (diff | hist) . . (+176) . . N Task 10: Molecular Dynamics Analysis (Created page with "In this task we are going to analyze the results of the molecular dynamics simulations of task 8. ==Native== ==P281L== ==R408W==")
- 13:33, 10 August 2011 (diff | hist) . . (+43) . . Phenylketonuria 2011 (→Tasks)
- 13:28, 10 August 2011 (diff | hist) . . (+666) . . Task 9: Normal Mode Analysis (→Anisotropic Network Model web server)
- 13:26, 10 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA distmapscalar5.png (current)
- 13:26, 10 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA distmapscalar4.png (current)
- 13:25, 10 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA distmapscalar3.png (current)
- 13:25, 10 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA distmapscalar2.png (current)
- 13:25, 10 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA distmapscalar1.png (current)
- 13:25, 10 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA dfegraphA5.png (current)
- 13:24, 10 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA dfegraphA4.png (current)
- 13:24, 10 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA dfegraphA2.png (current)
- 13:23, 10 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA dfegraphA3.png (current)
- 13:23, 10 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA dfegraphA1.png (current)
- 13:22, 10 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA Bfactors modes.png (current)
- 13:20, 10 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA Bfactors experimental.png (current)
- 13:19, 10 August 2011 (diff | hist) . . (+300) . . Task 9: Normal Mode Analysis (→Results)
- 13:16, 10 August 2011 (diff | hist) . . (+151) . . Task 9: Normal Mode Analysis (→Anisotropic Network Model web server)
- 13:15, 10 August 2011 (diff | hist) . . (+286) . . Task 9: Normal Mode Analysis (→Results)
- 13:04, 10 August 2011 (diff | hist) . . (+492) . . Task 9: Normal Mode Analysis (→Results)
- 12:48, 10 August 2011 (diff | hist) . . (+219) . . Task 9: Normal Mode Analysis (→Results)
- 12:44, 10 August 2011 (diff | hist) . . (+709) . . Task 9: Normal Mode Analysis (→Results)
- 12:34, 10 August 2011 (diff | hist) . . (0) . . Task 9: Normal Mode Analysis (→Anisotropic Network Model web server)
- 12:34, 10 August 2011 (diff | hist) . . (0) . . Task 9: Normal Mode Analysis (→Anisotropic Network Model web server)
- 20:22, 9 August 2011 (diff | hist) . . (+14) . . Task 9: Normal Mode Analysis (→Results)
- 20:21, 9 August 2011 (diff | hist) . . (+232) . . Task 9: Normal Mode Analysis (→Results)
- 20:18, 9 August 2011 (diff | hist) . . (0) . . N File:PAH elNemo Bfactors.png (current)
- 19:43, 9 August 2011 (diff | hist) . . (+323) . . Task 9: Normal Mode Analysis (→Results)
- 19:42, 9 August 2011 (diff | hist) . . (0) . . N File:PAH elnemo caflutuations Mode11.png (current)
- 19:42, 9 August 2011 (diff | hist) . . (0) . . N File:PAH elnemo caflutuations Mode10.png (current)
- 19:41, 9 August 2011 (diff | hist) . . (0) . . N File:PAH elnemo caflutuations Mode9.png (current)
- 19:41, 9 August 2011 (diff | hist) . . (0) . . N File:PAH elnemo caflutuations Mode8.png (current)
- 19:41, 9 August 2011 (diff | hist) . . (0) . . N File:PAH elnemo caflutuations Mode7.png (current)
- 19:24, 9 August 2011 (diff | hist) . . (+1,435) . . Task 9: Normal Mode Analysis (→Results)
- 19:03, 9 August 2011 (diff | hist) . . (+2) . . Task 9: Normal Mode Analysis (→Anisotropic Network Model web server)
- 19:03, 9 August 2011 (diff | hist) . . (+1,090) . . Task 9: Normal Mode Analysis (→Anisotropic Network Model web server)
- 18:47, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA input.png (current)
- 18:37, 9 August 2011 (diff | hist) . . (+1,805) . . Task 9: Normal Mode Analysis (→ElNemo)
- 18:11, 9 August 2011 (diff | hist) . . (0) . . N File:PAH elnemo expert input field.png (current)
- 18:11, 9 August 2011 (diff | hist) . . (0) . . N File:PAH elnemo supplementary input field.png (current)
- 18:10, 9 August 2011 (diff | hist) . . (0) . . N File:PAH elnemo comparing input field.png (current)
- 18:10, 9 August 2011 (diff | hist) . . (0) . . File:PAH elnemo basic input field.png (uploaded a new version of "File:PAH elnemo basic input field.png") (current)
- 18:09, 9 August 2011 (diff | hist) . . (0) . . N File:PAH elnemo basic input field.png
- 17:59, 9 August 2011 (diff | hist) . . (+684) . . Task 9: Normal Mode Analysis (→Results)
- 17:48, 9 August 2011 (diff | hist) . . (+222) . . Task 9: Normal Mode Analysis (→Webnma)
- 17:47, 9 August 2011 (diff | hist) . . (0) . . N File:PAH WEbnma input field.png (current)
- 17:34, 9 August 2011 (diff | hist) . . (+268) . . Task 9: Normal Mode Analysis (→Anisotropic Network Model web server)
- 17:32, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA Mode5.gif (current)
- 17:32, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA Mode4.gif (current)
- 17:31, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA Mode3.gif (current)
- 17:31, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA Mode2.gif (current)
- 17:31, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ANMA Mode1.gif (current)
- 17:29, 9 August 2011 (diff | hist) . . (+684) . . Task 9: Normal Mode Analysis (→ElNemo)
- 17:28, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode11 3.gif (current)
- 17:27, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode11 2.gif (current)
- 17:27, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode11 1.gif (current)
- 17:27, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode10 3.gif (current)
- 17:27, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode10 2.gif (current)
- 17:26, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode10 1.gif (current)
- 17:26, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode9 3.gif (current)
- 17:26, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode9 2.gif (current)
- 17:25, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode9 1.gif (current)
- 17:25, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode8 3.gif (current)
- 17:25, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode8 2.gif (current)
- 17:24, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode8 1.gif (current)
- 17:24, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode7 3.gif (current)
- 17:24, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode7 2.gif (current)
- 17:23, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO Mode7 1.gif (current)
- 17:22, 9 August 2011 (diff | hist) . . (0) . . N File:PAH ELNEMO COLLECTIVITY.png (current)
- 17:20, 9 August 2011 (diff | hist) . . (+267) . . Task 9: Normal Mode Analysis (→Results)
- 17:19, 9 August 2011 (diff | hist) . . (0) . . N File:PAH webnma Mode11.gif (current)
- 17:19, 9 August 2011 (diff | hist) . . (0) . . N File:PAH webnma Mode10.gif (current)
- 17:18, 9 August 2011 (diff | hist) . . (0) . . N File:PAH webnma Mode9.gif (current)
- 17:18, 9 August 2011 (diff | hist) . . (0) . . N File:PAH webnma Mode8.gif (current)
- 17:17, 9 August 2011 (diff | hist) . . (0) . . N File:PAH webnma Mode7.gif (current)
- 15:02, 9 August 2011 (diff | hist) . . (+115) . . Task 9: Normal Mode Analysis (→Webnma)
- 14:56, 9 August 2011 (diff | hist) . . (+9) . . Task 9: Normal Mode Analysis (→Results)
- 14:55, 9 August 2011 (diff | hist) . . (+22) . . Task 9: Normal Mode Analysis (→Results)
- 14:54, 9 August 2011 (diff | hist) . . (+270) . . Task 9: Normal Mode Analysis (→Webnma)
- 14:52, 9 August 2011 (diff | hist) . . (0) . . N File:PAH WEBNMA Mode11plot.png (current)
- 14:52, 9 August 2011 (diff | hist) . . (0) . . N File:PAH WEBNMA Mode10plot.png (current)
- 14:52, 9 August 2011 (diff | hist) . . (0) . . N File:PAH WEBNMA Mode9plot.png (current)
- 14:52, 9 August 2011 (diff | hist) . . (0) . . N File:PAH WEBNMA Mode8plot.png (current)
- 14:51, 9 August 2011 (diff | hist) . . (0) . . N File:PAH WEBNMA Mode7plot.png (current)
- 12:46, 8 August 2011 (diff | hist) . . (+166) . . Task 9: Normal Mode Analysis
- 12:43, 8 August 2011 (diff | hist) . . (+168) . . Task 9: Normal Mode Analysis
- 12:41, 8 August 2011 (diff | hist) . . (+2) . . Task 9: Normal Mode Analysis
- 12:40, 8 August 2011 (diff | hist) . . (+812) . . N Task 9: Normal Mode Analysis (Created page with "There are several forces acting within a protein. Most of these forces have one or more equilibrium states. In reality the protein is flexible. That means, that the atoms of the …")
- 12:24, 8 August 2011 (diff | hist) . . (+35) . . Phenylketonuria 2011 (→Tasks)
- 23:44, 4 July 2011 (diff | hist) . . (+2) . . Task 7: Structure-based mutation analysis (→Binding Site)
- 23:44, 4 July 2011 (diff | hist) . . (+17) . . Task 7: Structure-based mutation analysis (→Binding Site)
- 23:43, 4 July 2011 (diff | hist) . . (+1) . . Task 7: Structure-based mutation analysis (→Binding Site)
- 23:41, 4 July 2011 (diff | hist) . . (+238) . . Task 7: Structure-based mutation analysis (→Binding Site)
- 23:38, 4 July 2011 (diff | hist) . . (+48) . . Task 7: Structure-based mutation analysis (→Binding Site)
- 23:38, 4 July 2011 (diff | hist) . . (0) . . N File:Pah binding site mutations.png (current)
- 23:30, 4 July 2011 (diff | hist) . . (+272) . . Task 7: Structure-based mutation analysis (→Binding Site)
- 23:23, 4 July 2011 (diff | hist) . . (0) . . N File:Pah binding site.png (current)
- 23:22, 4 July 2011 (diff | hist) . . (+20) . . Task 7: Structure-based mutation analysis
- 22:38, 4 July 2011 (diff | hist) . . (0) . . Task 7: Structure-based mutation analysis (→R408W)
- 22:35, 4 July 2011 (diff | hist) . . (+456) . . Task 7: Structure-based mutation analysis (→R408W)
- 22:31, 4 July 2011 (diff | hist) . . (0) . . N File:PAH SCWRL WT312.png (current)
- 22:30, 4 July 2011 (diff | hist) . . (+258) . . Task 7: Structure-based mutation analysis (→G312D)
- 22:28, 4 July 2011 (diff | hist) . . (+491) . . Task 7: Structure-based mutation analysis (→P281L)
- 22:25, 4 July 2011 (diff | hist) . . (+621) . . Task 7: Structure-based mutation analysis (→R261Q)
- 22:11, 4 July 2011 (diff | hist) . . (0) . . N File:PAH SCWRL WT408.png (current)
- 22:11, 4 July 2011 (diff | hist) . . (0) . . N File:PAH SCWRL WT321.png (current)
- 22:10, 4 July 2011 (diff | hist) . . (0) . . N File:PAH SCWRL WT281.png (current)
- 22:10, 4 July 2011 (diff | hist) . . (0) . . N File:PAH SCWRL WT261.png (current)
- 22:10, 4 July 2011 (diff | hist) . . (0) . . N File:PAH SCWRL R408W.png (current)
- 22:09, 4 July 2011 (diff | hist) . . (0) . . N File:PAH SCWRL R261Q.png (current)
- 22:09, 4 July 2011 (diff | hist) . . (0) . . N File:PAH SCWRL P281L.png (current)
- 22:08, 4 July 2011 (diff | hist) . . (0) . . N File:PAH SCWRL G312D.png (current)
- 20:46, 4 July 2011 (diff | hist) . . (+62) . . Task 7: Structure-based mutation analysis (→Mutations)
- 20:39, 4 July 2011 (diff | hist) . . (-24) . . Task 7: Structure-based mutation analysis (→Comparison of the delta energies of the different methods and mutations)
- 20:38, 4 July 2011 (diff | hist) . . (+71) . . Task 7: Structure-based mutation analysis (→Comparison of the delta energies of the different methods and mutations)
- 20:35, 4 July 2011 (diff | hist) . . (+310) . . Task 7: Structure-based mutation analysis (→Comparison of the delta energies of the different methods and mutations)
- 20:26, 4 July 2011 (diff | hist) . . (+86) . . Task 7: Structure-based mutation analysis (→Comparison of the delta energies of the different methods and mutations)
- 20:25, 4 July 2011 (diff | hist) . . (+23) . . Task 7: Structure-based mutation analysis (→Minimise)
- 20:22, 4 July 2011 (diff | hist) . . (-2) . . Task 7: Structure-based mutation analysis (→Hydrogen bond network of the WT and mutants)
- 19:00, 1 July 2011 (diff | hist) . . (0) . . Task 7: Structure-based mutation analysis (→P275S)
- 18:59, 1 July 2011 (diff | hist) . . (+931) . . Task 7: Structure-based mutation analysis (→Gromacs)
- 18:56, 1 July 2011 (diff | hist) . . (-3) . . Task 7: Structure-based mutation analysis (→Gromacs)
- 18:54, 1 July 2011 (diff | hist) . . (+136) . . Task 7: Structure-based mutation analysis (→Gromacs)
- 18:51, 1 July 2011 (diff | hist) . . (0) . . N File:PAH T278N GROMACS Potential.png (current)
- 18:51, 1 July 2011 (diff | hist) . . (0) . . N File:PAH T278N GROMACS Bond.png (current)
- 18:51, 1 July 2011 (diff | hist) . . (0) . . N File:PAH T278N GROMACS Angle.png (current)
- 18:51, 1 July 2011 (diff | hist) . . (0) . . N File:PAH T266A GROMACS Potential.png (current)
- 18:51, 1 July 2011 (diff | hist) . . (0) . . N File:PAH T266A GROMACS Bond.png (current)
- 18:50, 1 July 2011 (diff | hist) . . (0) . . N File:PAH T266A GROMACS Angle.png (current)
- 18:50, 1 July 2011 (diff | hist) . . (0) . . N File:PAH R408W GROMACS Potential.png (current)
- 18:47, 1 July 2011 (diff | hist) . . (0) . . N File:PAH R408W GROMACS Bond.png (current)
- 18:46, 1 July 2011 (diff | hist) . . (0) . . N File:PAH R408W GROMACS Angle.png (current)
- 18:46, 1 July 2011 (diff | hist) . . (0) . . N File:PAH R261Q GROMACS Potential.png (current)
- 18:45, 1 July 2011 (diff | hist) . . (0) . . File:PAH R261Q GROMACS Bond.png (uploaded a new version of "File:PAH R261Q GROMACS Bond.png") (current)
- 18:45, 1 July 2011 (diff | hist) . . (0) . . N File:PAH R261Q GROMACS Angle.png (current)
- 18:45, 1 July 2011 (diff | hist) . . (0) . . N File:PAH R261Q GROMACS Bond.png
- 18:45, 1 July 2011 (diff | hist) . . (0) . . N File:PAH R158Q GROMACS Potential.png (current)
- 18:44, 1 July 2011 (diff | hist) . . (0) . . N File:PAH R158Q GROMACS Bond.png (current)
- 18:44, 1 July 2011 (diff | hist) . . (0) . . N File:PAH R158Q GROMACS Angle.png (current)
- 18:44, 1 July 2011 (diff | hist) . . (0) . . N File:PAH P281L GROMACS Potential.png (current)
- 18:44, 1 July 2011 (diff | hist) . . (0) . . N File:PAH P281L GROMACS Bond.png (current)
- 18:43, 1 July 2011 (diff | hist) . . (0) . . N File:PAH P281L GROMACS Angle.png (current)
- 18:43, 1 July 2011 (diff | hist) . . (0) . . N File:PAH P275S GROMACS Potential.png (current)
- 18:43, 1 July 2011 (diff | hist) . . (0) . . N File:PAH P275S GROMACS Bond.png (current)
- 18:43, 1 July 2011 (diff | hist) . . (0) . . N File:PAH P275S GROMACS Angle.png (current)
- 18:42, 1 July 2011 (diff | hist) . . (0) . . N File:PAH G312D GROMACS Potential.png (current)
- 18:42, 1 July 2011 (diff | hist) . . (0) . . N File:PAH G312D GROMACS Bond.png (current)
- 18:42, 1 July 2011 (diff | hist) . . (0) . . N File:PAH G312D GROMACS Angle.png (current)
- 18:34, 1 July 2011 (diff | hist) . . (+73) . . Task 7: Structure-based mutation analysis (→T266A)
- 18:32, 1 July 2011 (diff | hist) . . (+74) . . Task 7: Structure-based mutation analysis (→R261Q)
- 18:31, 1 July 2011 (diff | hist) . . (+90) . . Task 7: Structure-based mutation analysis (→R408W)
- 18:29, 1 July 2011 (diff | hist) . . (+74) . . Task 7: Structure-based mutation analysis (→R158Q)
- 18:28, 1 July 2011 (diff | hist) . . (+74) . . Task 7: Structure-based mutation analysis (→P281L)
- 18:26, 1 July 2011 (diff | hist) . . (+71) . . Task 7: Structure-based mutation analysis (→T278N)
- 18:24, 1 July 2011 (diff | hist) . . (+66) . . Task 7: Structure-based mutation analysis (→P275S)
- 18:23, 1 July 2011 (diff | hist) . . (+72) . . Task 7: Structure-based mutation analysis (→Mutations)
- 17:50, 1 July 2011 (diff | hist) . . (+1,866) . . Task 7: Structure-based mutation analysis (→Mutations)
- 17:36, 1 July 2011 (diff | hist) . . (-66) . . Task 7: Structure-based mutation analysis (→Minimise)
- 17:30, 1 July 2011 (diff | hist) . . (+209) . . Task 7: Structure-based mutation analysis (→Timerun)
- 17:30, 1 July 2011 (diff | hist) . . (0) . . N File:PAH GROMACS Timeplot.png (current)
- 17:26, 1 July 2011 (diff | hist) . . (+762) . . Task 7: Structure-based mutation analysis
- 20:16, 27 June 2011 (diff | hist) . . (+3,079) . . Task 6: Sequence-based mutation analysis (→Mutations compared to BLOSUM62, PAM(1/250), PSSM and conservation of MSA with all mammalian homologous)
- 10:11, 27 June 2011 (diff | hist) . . (+3) . . Task 6: Sequence-based mutation analysis (→R408W)
- 10:10, 27 June 2011 (diff | hist) . . (-7) . . Task 6: Sequence-based mutation analysis (→Execution)
- 10:08, 27 June 2011 (diff | hist) . . (-31) . . Task 6: Sequence-based mutation analysis (→PSSM)
- 10:07, 27 June 2011 (diff | hist) . . (+233) . . Task 6: Sequence-based mutation analysis (→PSSM)
- 18:10, 25 June 2011 (diff | hist) . . (+62) . . Task 6: Sequence-based mutation analysis (→R408W)
- 18:07, 25 June 2011 (diff | hist) . . (+62) . . Task 6: Sequence-based mutation analysis (→G312D)
- 18:02, 25 June 2011 (diff | hist) . . (+60) . . Task 6: Sequence-based mutation analysis (→R261Q)
- 17:58, 25 June 2011 (diff | hist) . . (+28) . . Task 6: Sequence-based mutation analysis (→I65T)
- 17:57, 25 June 2011 (diff | hist) . . (+65) . . Task 6: Sequence-based mutation analysis (→R71H)
- 17:53, 25 June 2011 (diff | hist) . . (+36) . . Task 6: Sequence-based mutation analysis (→I65T)
- 17:48, 25 June 2011 (diff | hist) . . (+633) . . Task 6: Sequence-based mutation analysis (→R71H)
- 17:37, 25 June 2011 (diff | hist) . . (+1,063) . . Task 6: Sequence-based mutation analysis (→G312D)
- 17:18, 25 June 2011 (diff | hist) . . (+538) . . Task 6: Sequence-based mutation analysis (→R261Q)
- 17:09, 25 June 2011 (diff | hist) . . (+22) . . Task 6: Sequence-based mutation analysis (→R261Q)
- 17:08, 25 June 2011 (diff | hist) . . (-8) . . Task 6: Sequence-based mutation analysis (→R261Q)
- 17:06, 25 June 2011 (diff | hist) . . (-1,405) . . Task 6: Sequence-based mutation analysis (→Mutations compared to BLOSUM62, PAM(1/250), PSSM and conservation of MSA with all mammalian homologous)
- 16:57, 25 June 2011 (diff | hist) . . (+2,582) . . Task 6: Sequence-based mutation analysis (→Discussion)
- 15:44, 25 June 2011 (diff | hist) . . (+382) . . Task 6: Sequence-based mutation analysis (→Mutations and secondary structure)
- 15:34, 25 June 2011 (diff | hist) . . (-1,786) . . Task 6: Sequence-based mutation analysis (→Mutations and secondary structure)
- 15:29, 25 June 2011 (diff | hist) . . (+180) . . Task 6: Sequence-based mutation analysis (→Mutations compared to BLOSUM62, PAM(1/250), PSSM and conservation of MSA with all mammalian homologous)
- 14:50, 25 June 2011 (diff | hist) . . (+3) . . Task 6: Sequence-based mutation analysis (→G312D)
- 14:49, 25 June 2011 (diff | hist) . . (+484) . . Task 6: Sequence-based mutation analysis (→Visualization of the changed Amino Acid)
- 14:44, 25 June 2011 (diff | hist) . . (+39) . . Task 6: Sequence-based mutation analysis (→I65T)
- 14:43, 25 June 2011 (diff | hist) . . (+96) . . Task 6: Sequence-based mutation analysis (→Visualization of the changed Amino Acid)
- 14:43, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.G312.mut.png (current)
- 14:42, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.G312.wt.png (current)
- 14:41, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.R408W.png (current)
- 14:40, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.R261Q.png (current)
- 14:36, 25 June 2011 (diff | hist) . . (+196) . . Task 6: Sequence-based mutation analysis
- 14:31, 25 June 2011 (diff | hist) . . (+1) . . Task 6: Sequence-based mutation analysis (→Mutations compared to BLOSUM62, PAM(1/250), PSSM and conservation of MSA with all mammalian homologous)
- 14:29, 25 June 2011 (diff | hist) . . (+390) . . Task 6: Sequence-based mutation analysis (→Mutations compared to BLOSUM62, PAM(1/250), PSSM and conservation of MSA with all mammalian homologous)
- 14:20, 25 June 2011 (diff | hist) . . (0) . . N File:PAM250.I.png (current)
- 14:20, 25 June 2011 (diff | hist) . . (0) . . N File:PAM250.R.png (current)
- 14:19, 25 June 2011 (diff | hist) . . (0) . . N File:PAM250.T.png (current)
- 14:19, 25 June 2011 (diff | hist) . . (+837) . . Task 6: Sequence-based mutation analysis (→Mutations compared to BLOSUM62, PAM(1/250), PSSM and conservation of MSA with all mammalian homologous)
- 14:08, 25 June 2011 (diff | hist) . . (+1,766) . . Task 6: Sequence-based mutation analysis (→Mutations compared to BLOSUM62, PAM(1/250), PSSM and conservation of MSA with all mammalian homologous)
- 13:48, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.PSI PSSM.408.png (current)
- 13:48, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.PSI PSSM.312.png (current)
- 13:47, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.PSI PSSM.281.png (current)
- 13:47, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.PSI PSSM.278.png (current)
- 13:47, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.PSI PSSM.275.png (current)
- 13:47, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.PSI PSSM.266.png (current)
- 13:46, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.PSI PSSM.261.png (current)
- 13:46, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.PSI PSSM.158.png (current)
- 13:46, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.PSI PSSM.71.png (current)
- 13:45, 25 June 2011 (diff | hist) . . (0) . . N File:PAH.PSI PSSM.65.png (current)
- 13:36, 25 June 2011 (diff | hist) . . (0) . . N File:PAM250.P.png (current)
- 13:36, 25 June 2011 (diff | hist) . . (0) . . N File:PAM250.G.png (current)
- 13:35, 25 June 2011 (diff | hist) . . (0) . . N File:DAYHOFF.T.png (current)
- 13:35, 25 June 2011 (diff | hist) . . (0) . . N File:DAYHOFF.R.png (current)
- 13:35, 25 June 2011 (diff | hist) . . (0) . . N File:DAYHOFF.P.png (current)