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From Bioinformatikpedia
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- 21:03, 29 September 2011 (diff | hist) . . (0) . . Molecular Dynamics Analysis BCKDHA (→Cluster analysis) (current)
- 21:02, 29 September 2011 (diff | hist) . . (-3) . . Molecular Dynamics Analysis BCKDHA (→Internal RMSD)
- 10:40, 29 September 2011 (diff | hist) . . (+75) . . Normal Mode Analysis BCKDHA (→Comparison of the lowest-frequency normal modes with the MD simulation) (current)
- 10:27, 29 September 2011 (diff | hist) . . (+9) . . Molecular Dynamics Analysis BCKDHA (→Mutation C264W)
- 10:26, 29 September 2011 (diff | hist) . . (+184) . . Molecular Dynamics Analysis BCKDHA (→Mutation C264W)
- 09:58, 29 September 2011 (diff | hist) . . (-6) . . Molecular Dynamics Analysis BCKDHA (→Internal RMSD)
- 09:54, 29 September 2011 (diff | hist) . . (-9) . . Molecular Dynamics Analysis BCKDHA (→Hydrogen bonds)
- 09:48, 29 September 2011 (diff | hist) . . (+16) . . Molecular Dynamics Analysis BCKDHA (→Solvent accessible surface area)
- 23:01, 28 September 2011 (diff | hist) . . (-2) . . Molecular Dynamics Analysis BCKDHA (→Radius of gyration)
- 22:59, 28 September 2011 (diff | hist) . . (+4) . . Molecular Dynamics Analysis BCKDHA (→Protein)
- 22:57, 28 September 2011 (diff | hist) . . (-10) . . Molecular Dynamics Analysis BCKDHA (→Root mean square fluctuations)
- 22:55, 28 September 2011 (diff | hist) . . (+1) . . Molecular Dynamics Analysis BCKDHA (→Minimum distance between periodic boundary cells)
- 08:44, 28 September 2011 (diff | hist) . . (+554) . . Normal Mode Analysis BCKDHA (→Advantages and Disadvantages from NMA and MD)
- 08:40, 28 September 2011 (diff | hist) . . (+40) . . Normal Mode Analysis BCKDHA (→Advantages and Disadvantages from NMA and MD)
- 23:21, 27 September 2011 (diff | hist) . . (+51) . . Molecular Dynamics Analysis BCKDHA (→Mutation M82L)
- 20:19, 26 September 2011 (diff | hist) . . (+1) . . Molecular Dynamics Analysis BCKDHA (→Internal RMSD)
- 20:17, 26 September 2011 (diff | hist) . . (+10) . . Molecular Dynamics Analysis BCKDHA (→Cluster analysis)
- 20:15, 26 September 2011 (diff | hist) . . (+2) . . Molecular Dynamics Analysis BCKDHA (→RMSD matrix)
- 20:13, 26 September 2011 (diff | hist) . . (-2) . . Molecular Dynamics Analysis BCKDHA (→Ramachandran plot)
- 20:12, 26 September 2011 (diff | hist) . . (-7) . . Molecular Dynamics Analysis BCKDHA (→Hydrogen bonds)
- 20:09, 26 September 2011 (diff | hist) . . (+97) . . Molecular Dynamics Analysis BCKDHA (→Solvent accessible surface area)
- 20:00, 26 September 2011 (diff | hist) . . (-2) . . Molecular Dynamics Analysis BCKDHA (→Radius of gyration)
- 19:58, 26 September 2011 (diff | hist) . . (-6) . . Molecular Dynamics Analysis BCKDHA (→C-alpha)
- 19:56, 26 September 2011 (diff | hist) . . (+4) . . Molecular Dynamics Analysis BCKDHA (→Protein)
- 19:55, 26 September 2011 (diff | hist) . . (+17) . . Molecular Dynamics Analysis BCKDHA (→Protein)
- 19:43, 26 September 2011 (diff | hist) . . (+1) . . Molecular Dynamics Analysis BCKDHA (→Root mean square fluctuations)
- 19:40, 26 September 2011 (diff | hist) . . (+1) . . Molecular Dynamics Analysis BCKDHA (→Minimum distance between periodic boundary cells)
- 19:38, 26 September 2011 (diff | hist) . . (-4) . . Molecular Dynamics Analysis BCKDHA (→Potential)
- 19:36, 26 September 2011 (diff | hist) . . (+22) . . Molecular Dynamics Analysis BCKDHA (→Pressure)
- 19:36, 26 September 2011 (diff | hist) . . (-4) . . Molecular Dynamics Analysis BCKDHA (→Pressure)
- 19:35, 26 September 2011 (diff | hist) . . (+4) . . Molecular Dynamics Analysis BCKDHA (→Pressure)
- 18:26, 25 September 2011 (diff | hist) . . (+160) . . Molecular Dynamics Analysis BCKDHA (→RMSD matrix)
- 18:20, 25 September 2011 (diff | hist) . . (-129) . . Molecular Dynamics Analysis BCKDHA (→RMSD matrix)
- 18:20, 25 September 2011 (diff | hist) . . (+100) . . Molecular Dynamics Analysis BCKDHA (→RMSD matrix)
- 18:18, 25 September 2011 (diff | hist) . . (+3) . . Molecular Dynamics Analysis BCKDHA (→Ramachandran plot)
- 18:15, 25 September 2011 (diff | hist) . . (+49) . . Molecular Dynamics Analysis BCKDHA (→Hydrogen bonds)
- 18:08, 25 September 2011 (diff | hist) . . (0) . . Molecular Dynamics Analysis BCKDHA (→Radius of gyration)
- 12:48, 25 September 2011 (diff | hist) . . (+231) . . Normal Mode Analysis BCKDHA (→Advantages and Disadvantages from NMA and MD)
- 12:43, 25 September 2011 (diff | hist) . . (+191) . . Normal Mode Analysis BCKDHA (→Advantages and Disadvantages from NMA and MD)
- 12:36, 25 September 2011 (diff | hist) . . (+1,725) . . Normal Mode Analysis BCKDHA (→Advantages and Disadvantages from NMA and MD)
- 12:09, 23 September 2011 (diff | hist) . . (+8) . . Molecular Dynamics Analysis BCKDHA (→Solvent accessible surface area)
- 12:06, 23 September 2011 (diff | hist) . . (+49) . . Protocol BCKDHA MD (→Internal RMSD)
- 12:05, 23 September 2011 (diff | hist) . . (+313) . . Molecular Dynamics Analysis BCKDHA (→Solvent accessible surface area)
- 12:05, 23 September 2011 (diff | hist) . . (-2) . . Protocol BCKDHA MD (→Solvent accessible surface area)
- 12:02, 23 September 2011 (diff | hist) . . (+115) . . Molecular Dynamics Analysis BCKDHA (→Radius of gyration)
- 11:53, 23 September 2011 (diff | hist) . . (+37) . . Molecular Dynamics Analysis BCKDHA (→C-alpha)
- 11:44, 23 September 2011 (diff | hist) . . (+12) . . Molecular Dynamics Analysis BCKDHA (→Protein)
- 11:42, 23 September 2011 (diff | hist) . . (-2) . . Molecular Dynamics Analysis BCKDHA (→Pymol analysis of average and bfactors)
- 11:41, 23 September 2011 (diff | hist) . . (-3) . . Molecular Dynamics Analysis BCKDHA (→Root mean square fluctuations)
- 11:25, 23 September 2011 (diff | hist) . . (+63) . . Molecular Dynamics Analysis BCKDHA (→Minimum distance between periodic boundary cells)
- 11:21, 23 September 2011 (diff | hist) . . (+492) . . Molecular Dynamics Analysis BCKDHA (→Minimum distance between periodic boundary cells)
- 11:12, 23 September 2011 (diff | hist) . . (+101) . . Molecular Dynamics Analysis BCKDHA (→Quality assurance)
- 11:11, 23 September 2011 (diff | hist) . . (+239) . . Molecular Dynamics Analysis BCKDHA (→Quality assurance)
- 11:00, 23 September 2011 (diff | hist) . . (+9) . . Protocol BCKDHA MD (→Energy calculations)
- 10:59, 23 September 2011 (diff | hist) . . (+5) . . Protocol BCKDHA MD (→Visualization of results)
- 14:28, 13 August 2011 (diff | hist) . . (+547) . . Normal Mode Analysis BCKDHA (→WEBnm@)
- 23:09, 12 August 2011 (diff | hist) . . (-2) . . Homology based structure predictions BCKDHA (→Numeric evaluation)
- 18:09, 12 August 2011 (diff | hist) . . (+438) . . Normal Mode Analysis BCKDHA (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 18:00, 12 August 2011 (diff | hist) . . (+92) . . Normal Mode Analysis BCKDHA (→Discussion)
- 17:57, 12 August 2011 (diff | hist) . . (+99) . . Normal Mode Analysis BCKDHA (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 17:56, 12 August 2011 (diff | hist) . . (+1,162) . . Normal Mode Analysis BCKDHA (→Advantages and Disadvantages from NMA and MD)
- 17:28, 12 August 2011 (diff | hist) . . (+634) . . Normal Mode Analysis BCKDHA (→Discussion)
- 16:46, 12 August 2011 (diff | hist) . . (+165) . . Normal Mode Analysis BCKDHA (→Results)
- 16:37, 12 August 2011 (diff | hist) . . (+64) . . Normal Mode Analysis BCKDHA (→Results)
- 16:35, 12 August 2011 (diff | hist) . . (+210) . . Normal Mode Analysis BCKDHA (→Discussion)
- 16:33, 12 August 2011 (diff | hist) . . (+503) . . Normal Mode Analysis BCKDHA (→Results)
- 16:28, 12 August 2011 (diff | hist) . . (+150) . . Normal Mode Analysis BCKDHA (→Results)
- 16:25, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA oGNM cc.jpg (current)
- 16:20, 12 August 2011 (diff | hist) . . (+378) . . Normal Mode Analysis BCKDHA (→Discussion)
- 16:16, 12 August 2011 (diff | hist) . . (+810) . . Normal Mode Analysis BCKDHA (→Discussion)
- 16:07, 12 August 2011 (diff | hist) . . (+6) . . Normal Mode Analysis BCKDHA (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 15:07, 12 August 2011 (diff | hist) . . (+1,436) . . Normal Mode Analysis BCKDHA (→Results)
- 14:55, 12 August 2011 (diff | hist) . . (+2,087) . . Normal Mode Analysis BCKDHA (→Results)
- 14:31, 12 August 2011 (diff | hist) . . (-15) . . Normal Mode Analysis BCKDHA (→Results)
- 14:29, 12 August 2011 (diff | hist) . . (+337) . . Normal Mode Analysis BCKDHA (→Discussion)
- 14:25, 12 August 2011 (diff | hist) . . (+45) . . Normal Mode Analysis BCKDHA (→Background information)
- 14:24, 12 August 2011 (diff | hist) . . (+33) . . Normal Mode Analysis BCKDHA (→Background information)
- 14:18, 12 August 2011 (diff | hist) . . (+169) . . Normal Mode Analysis BCKDHA (→Results)
- 14:18, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA tempSlowmodes mode5.PNG (current)
- 14:17, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA tempSlowmodes mode4.PNG (current)
- 14:15, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA tempSlowmodes mode3.PNG (current)
- 14:15, 12 August 2011 (diff | hist) . . (+1,279) . . Normal Mode Analysis BCKDHA (→oGNM – Gaussian network model)
- 14:15, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA tempSlowmodes mode2.PNG (current)
- 14:14, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA oGNM mode5.PNG (current)
- 14:12, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA oGNM mode4.PNG (current)
- 14:12, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA oGNM mode3.PNG (current)
- 14:12, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA oGNM mode2.PNG (current)
- 14:11, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA tempSlowmodes mode1.PNG (current)
- 14:10, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA oGNM mode1.PNG (current)
- 14:06, 12 August 2011 (diff | hist) . . (+1,241) . . Normal Mode Analysis BCKDHA (→Background information)
- 13:41, 12 August 2011 (diff | hist) . . (-214) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 13:38, 12 August 2011 (diff | hist) . . (+64) . . Normal Mode Analysis BCKDHA (→oGNM – Gaussian network model)
- 13:37, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA distmapscalar10.png (current)
- 13:36, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA ANM Bfactors mode9.png (current)
- 13:36, 12 August 2011 (diff | hist) . . (+1,097) . . Normal Mode Analysis BCKDHA (→Background information)
- 13:25, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA dfegraph mode10.png (current)
- 13:23, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA distmapscalar9.png (current)
- 13:22, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA dfegraph mode9.png (current)
- 13:22, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA distmapscalar8.png (current)
- 13:22, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA dfegraph mode8.png (current)
- 13:21, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA dfegraph mode6.png (current)
- 13:21, 12 August 2011 (diff | hist) . . (+1,168) . . Normal Mode Analysis BCKDHA (→Results)
- 13:21, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA distmapscalar6.png (current)
- 13:20, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA dfegraph mode7.png (current)
- 13:20, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA distmapscalar7.png (current)
- 13:04, 12 August 2011 (diff | hist) . . (0) . . File:BCKDHA ANM Bfactors mode7.png (uploaded a new version of "File:BCKDHA ANM Bfactors mode7.png") (current)
- 13:04, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA ANM Bfactors mode8.png (current)
- 13:03, 12 August 2011 (diff | hist) . . (0) . . File:BCKDHA ANM Bfactors mode7.png (uploaded a new version of "File:BCKDHA ANM Bfactors mode7.png")
- 13:01, 12 August 2011 (diff | hist) . . (0) . . Normal Mode Analysis BCKDHA (→Results)
- 13:00, 12 August 2011 (diff | hist) . . (+671) . . Normal Mode Analysis BCKDHA (→Results)
- 12:35, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA ANM Bfactors mode7.png
- 12:34, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA ANM Bfactors mode6.png (current)
- 12:33, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA ANM Bfactors mode10.png (current)
- 12:30, 12 August 2011 (diff | hist) . . (+5) . . Normal Mode Analysis BCKDHA (→Results)
- 12:27, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA ANM mode10.gif (current)
- 12:25, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA ANM mode9.gif (current)
- 12:23, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA ANM mode7.gif (current)
- 12:22, 12 August 2011 (diff | hist) . . (0) . . File:BCKDHA ANM mode6.gif (uploaded a new version of "File:BCKDHA ANM mode6.gif") (current)
- 12:18, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA ANM mode8.gif (current)
- 12:17, 12 August 2011 (diff | hist) . . (+468) . . Normal Mode Analysis BCKDHA (→Anisotropic Network Model web server)
- 12:13, 12 August 2011 (diff | hist) . . (+20) . . Normal Mode Analysis BCKDHA (→Results)
- 12:12, 12 August 2011 (diff | hist) . . (0) . . N File:BCKDHA ANM mode6.gif
- 11:52, 12 August 2011 (diff | hist) . . (+2,134) . . Normal Mode Analysis BCKDHA (→Results)
- 11:20, 12 August 2011 (diff | hist) . . (+136) . . Normal Mode Analysis BCKDHA (→Background information)
- 11:06, 12 August 2011 (diff | hist) . . (+169) . . Normal Mode Analysis BCKDHA (→References)
- 11:05, 12 August 2011 (diff | hist) . . (+302) . . Normal Mode Analysis BCKDHA (→Background information)
- 10:56, 12 August 2011 (diff | hist) . . (-16) . . Normal Mode Analysis BCKDHA (→Background information)
- 10:55, 12 August 2011 (diff | hist) . . (-52) . . Normal Mode Analysis BCKDHA (→Background information)
- 10:48, 12 August 2011 (diff | hist) . . (-4) . . Normal Mode Analysis BCKDHA (→Background information)
- 10:45, 12 August 2011 (diff | hist) . . (+262) . . Normal Mode Analysis BCKDHA (→Results)
- 10:42, 12 August 2011 (diff | hist) . . (+244) . . Normal Mode Analysis BCKDHA (→Discussion)
- 10:35, 12 August 2011 (diff | hist) . . (+9) . . Normal Mode Analysis BCKDHA (→Results)
- 10:34, 12 August 2011 (diff | hist) . . (+204) . . Normal Mode Analysis BCKDHA (→Discussion)
- 10:29, 12 August 2011 (diff | hist) . . (+210) . . Normal Mode Analysis BCKDHA (→Results)
- 10:14, 12 August 2011 (diff | hist) . . (+152) . . Normal Mode Analysis BCKDHA (→Results)
- 22:27, 11 August 2011 (diff | hist) . . (+440) . . Structure-based mutation analysis BCKDHA (→Wildtype analysis: force fields) (current)
- 22:16, 11 August 2011 (diff | hist) . . (+511) . . Structure-based mutation analysis BCKDHA (→Results)
- 22:11, 11 August 2011 (diff | hist) . . (-11) . . Structure-based mutation analysis BCKDHA (→Wildtype analysis: nsteps vs time)
- 22:09, 11 August 2011 (diff | hist) . . (+626) . . F409C (→Conclusion) (current)
- 22:02, 11 August 2011 (diff | hist) . . (+119) . . F409C (→gromacs Energy comparison)
- 22:00, 11 August 2011 (diff | hist) . . (+118) . . F409C (→minimise Energy Comparison)
- 21:55, 11 August 2011 (diff | hist) . . (+637) . . I326T (→Conclusion) (current)
- 21:49, 11 August 2011 (diff | hist) . . (+839) . . R265W (→Structure-based Mutation Analysis)
- 21:47, 11 August 2011 (diff | hist) . . (+66) . . C264W (→foldX Energy Comparison) (current)
- 21:37, 11 August 2011 (diff | hist) . . (+803) . . C264W (→Conclusion)
- 21:33, 11 August 2011 (diff | hist) . . (+115) . . C264W (→gromacs Energy comparison)
- 21:31, 11 August 2011 (diff | hist) . . (+31) . . C264W (→minimise Energy Comparison)
- 21:29, 11 August 2011 (diff | hist) . . (+571) . . G249S (→Structure-based Mutation Analysis) (current)
- 21:23, 11 August 2011 (diff | hist) . . (+793) . . Y166N (→Structure-based Mutation Analysis) (current)
- 21:16, 11 August 2011 (diff | hist) . . (+150) . . Y166N (→minimise Energy Comparison)
- 21:15, 11 August 2011 (diff | hist) . . (+398) . . Q125E (→Conclusion) (current)
- 21:13, 11 August 2011 (diff | hist) . . (+227) . . Q125E (→gromacs Energy comparison)
- 21:04, 11 August 2011 (diff | hist) . . (+219) . . Q125E (→minimise Energy Comparison)
- 21:01, 11 August 2011 (diff | hist) . . (-15) . . M82L (→Conclusion) (current)
- 20:58, 11 August 2011 (diff | hist) . . (+360) . . M82L (→Conclusion)
- 20:56, 11 August 2011 (diff | hist) . . (+252) . . M82L (→Side chain properties)
- 20:53, 11 August 2011 (diff | hist) . . (+224) . . M82L (→Mapping onto crystal structure)
- 20:52, 11 August 2011 (diff | hist) . . (+235) . . M82L (→gromacs Energy comparison)
- 20:47, 11 August 2011 (diff | hist) . . (+133) . . M82L (→minimise Energy Comparison)
- 20:45, 11 August 2011 (diff | hist) . . (+467) . . Y438N (→Conclusion)
- 20:37, 11 August 2011 (diff | hist) . . (+221) . . Y438N (→gromacs Energy comparison)
- 20:36, 11 August 2011 (diff | hist) . . (+105) . . Structure-based mutation analysis BCKDHA (→Minimise)
- 20:32, 11 August 2011 (diff | hist) . . (+230) . . Y438N (→minimise Energy Comparison)
- 20:28, 11 August 2011 (diff | hist) . . (0) . . Y438N (→Hydrogen Bonding network)
- 20:28, 11 August 2011 (diff | hist) . . (0) . . Y438N (→Side chain properties)
- 20:27, 11 August 2011 (diff | hist) . . (+191) . . Y438N (→Side chain properties)
- 20:26, 11 August 2011 (diff | hist) . . (+254) . . Y438N (→Mapping onto crystal structure)
- 20:24, 11 August 2011 (diff | hist) . . (+306) . . F409C (→Side chain properties)
- 20:20, 11 August 2011 (diff | hist) . . (+413) . . F409C (→Mapping onto crystal structure)
- 20:18, 11 August 2011 (diff | hist) . . (+130) . . Y438N (→Mapping onto crystal structure)
- 20:17, 11 August 2011 (diff | hist) . . (0) . . F409C (→Hydrogen Bonding network)
- 20:16, 11 August 2011 (diff | hist) . . (+164) . . F409C (→Mapping onto crystal structure)
- 20:15, 11 August 2011 (diff | hist) . . (+349) . . I326T (→Side chain properties)
- 20:12, 11 August 2011 (diff | hist) . . (+292) . . I326T (→Mapping onto crystal structure)
- 20:09, 11 August 2011 (diff | hist) . . (+347) . . R265W (→Side chain properties)
- 20:07, 11 August 2011 (diff | hist) . . (+239) . . R265W (→Mapping onto crystal structure)
- 20:05, 11 August 2011 (diff | hist) . . (+481) . . C264W (→Side chain properties)
- 20:04, 11 August 2011 (diff | hist) . . (+272) . . C264W (→Mapping onto crystal structure)
- 20:00, 11 August 2011 (diff | hist) . . (+32) . . G249S (→Conclusion)
- 20:00, 11 August 2011 (diff | hist) . . (+522) . . G249S (→Side chain properties)
- 19:56, 11 August 2011 (diff | hist) . . (+213) . . G249S (→Mapping onto crystal structure)
- 19:53, 11 August 2011 (diff | hist) . . (+337) . . Y166N (→Side chain properties)
- 19:50, 11 August 2011 (diff | hist) . . (+300) . . Y166N (→Mapping onto crystal structure)
- 19:48, 11 August 2011 (diff | hist) . . (0) . . Q125E (→Hydrogen Bonding network)
- 19:48, 11 August 2011 (diff | hist) . . (+129) . . Y166N (→Mapping onto crystal structure)
- 19:47, 11 August 2011 (diff | hist) . . (+400) . . Q125E (→Side chain properties)
- 19:46, 11 August 2011 (diff | hist) . . (-39) . . Q125E (→Mapping onto crystal structure)
- 19:43, 11 August 2011 (diff | hist) . . (0) . . Q125E (→Side chain properties)
- 19:43, 11 August 2011 (diff | hist) . . (+512) . . Q125E (→Mapping onto crystal structure)
- 13:49, 11 August 2011 (diff | hist) . . (+130) . . Q125E (→Mapping onto crystal structure)
- 13:46, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA mut9 surface.png (current)
- 13:43, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA mut8 surface.png (current)
- 13:42, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA mut3 surface.png (current)
- 13:41, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA mut2 surface.png (current)
- 13:37, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA mut1.png (current)
- 13:35, 11 August 2011 (diff | hist) . . (+3) . . Q125E (→Mapping onto crystal structure)
- 13:34, 11 August 2011 (diff | hist) . . (+477) . . F409C (→Structure-based Mutation Analysis)
- 13:34, 11 August 2011 (diff | hist) . . (-10) . . Q125E (→Mapping onto crystal structure)
- 13:34, 11 August 2011 (diff | hist) . . (-10) . . Y166N (→Mapping onto crystal structure)
- 13:34, 11 August 2011 (diff | hist) . . (-10) . . G249S (→Mapping onto crystal structure)
- 13:34, 11 August 2011 (diff | hist) . . (-10) . . C264W (→Mapping onto crystal structure)
- 13:34, 11 August 2011 (diff | hist) . . (+477) . . I326T (→Structure-based Mutation Analysis)
- 13:34, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA mut8.png (current)
- 13:33, 11 August 2011 (diff | hist) . . (-10) . . Y438N (→Mapping onto crystal structure)
- 13:33, 11 August 2011 (diff | hist) . . (-10) . . M82L (→Mapping onto crystal structure)
- 13:33, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA mut7.png (current)
- 13:33, 11 August 2011 (diff | hist) . . (+476) . . R265W (→Structure-based Mutation Analysis)
- 13:32, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA mut6.png (current)
- 13:32, 11 August 2011 (diff | hist) . . (+488) . . C264W (→Structure-based Mutation Analysis)
- 13:32, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA mut5.png (current)
- 13:32, 11 August 2011 (diff | hist) . . (+488) . . G249S (→Structure-based Mutation Analysis)
- 13:32, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA mut4.png (current)
- 13:31, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA mut3.png (current)
- 13:31, 11 August 2011 (diff | hist) . . (+488) . . Y166N (→Structure-based Mutation Analysis)
- 13:30, 11 August 2011 (diff | hist) . . (+488) . . Q125E (→Structure-based Mutation Analysis)
- 13:30, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA mut2 wt.png (current)
- 13:30, 11 August 2011 (diff | hist) . . (+488) . . M82L (→Structure-based Mutation Analysis)
- 13:30, 11 August 2011 (diff | hist) . . (+487) . . Y438N (→Structure-based Mutation Analysis)
- 13:29, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA mut9.png (current)
- 13:25, 11 August 2011 (diff | hist) . . (+303) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 13:22, 11 August 2011 (diff | hist) . . (-764) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 13:22, 11 August 2011 (diff | hist) . . (-1) . . Q125E (→Hydrogen Bonding network)
- 13:22, 11 August 2011 (diff | hist) . . (+765) . . Y438N (→Hydrogen Bonding network)
- 13:22, 11 August 2011 (diff | hist) . . (+766) . . F409C (→Hydrogen Bonding network)
- 13:22, 11 August 2011 (diff | hist) . . (+765) . . I326T (→Hydrogen Bonding network)
- 13:22, 11 August 2011 (diff | hist) . . (+766) . . R265W (→Hydrogen Bonding network)
- 13:21, 11 August 2011 (diff | hist) . . (+766) . . C264W (→Hydrogen Bonding network)
- 13:21, 11 August 2011 (diff | hist) . . (+766) . . G249S (→Hydrogen Bonding network)
- 13:21, 11 August 2011 (diff | hist) . . (+766) . . Y166N (→Hydrogen Bonding network)
- 13:21, 11 August 2011 (diff | hist) . . (-183) . . M82L (→Hydrogen Bonding network)
- 13:21, 11 August 2011 (diff | hist) . . (+768) . . Q125E (→Hydrogen Bonding network)
- 13:21, 11 August 2011 (diff | hist) . . (+950) . . M82L (→Hydrogen Bonding network)
- 13:20, 11 August 2011 (diff | hist) . . (0) . . N File:BCKDHA surface.png (current)
- 11:49, 11 August 2011 (diff | hist) . . (+9) . . Structure-based mutation analysis BCKDHA (→Mutation analysis)
- 11:45, 11 August 2011 (diff | hist) . . (+3,876) . . N Y438N (Created page with "== Structure-based Mutation Analysis == === Mapping onto crystal structure === === Side chain properties === {|class="centered" |[[File:Wildtype9_BCKDHAMinimise.png|thumb|Figu…")
- 11:43, 11 August 2011 (diff | hist) . . (+3,933) . . N F409C (Created page with "== Structure-based Mutation Analysis == === Mapping onto crystal structure === === Side chain properties === {|class="centered" |[[File:Wildtype8_BCKDHAMinimise.png|thumb|Figu…")
- 11:41, 11 August 2011 (diff | hist) . . (+3,863) . . N I326T (Created page with "== Structure-based Mutation Analysis == === Mapping onto crystal structure === === Side chain properties === {|class="centered" |[[File:Wildtype7_BCKDHAMinimise.png|thumb|Figu…")
- 11:39, 11 August 2011 (diff | hist) . . (+3,925) . . N R265W (Created page with "== Structure-based Mutation Analysis == === Mapping onto crystal structure === === Side chain properties === {|class="centered" |[[File:Wildtype6_BCKDHAMinimise.png|thumb|Figu…")
- 11:37, 11 August 2011 (diff | hist) . . (0) . . G249S (→gromacs Energy comparison)
- 11:37, 11 August 2011 (diff | hist) . . (+3,811) . . N C264W (Created page with "== Structure-based Mutation Analysis == === Mapping onto crystal structure === === Side chain properties === {|class="centered" |[[File:Wildtype5_BCKDHAMinimise.png|thumb|Figu…")
- 11:34, 11 August 2011 (diff | hist) . . (+3,962) . . N G249S (Created page with "== Structure-based Mutation Analysis == === Mapping onto crystal structure === === Side chain properties === {|class="centered" |[[File:Wildtype4_BCKDHAMinimise.png|thumb|Figu…")
- 11:32, 11 August 2011 (diff | hist) . . (+3,884) . . N Y166N (Created page with "== Structure-based Mutation Analysis == === Mapping onto crystal structure === === Side chain properties === {|class="centered" |[[File:Wildtype3_BCKDHAMinimise.png|thumb|Figu…")
- 11:29, 11 August 2011 (diff | hist) . . (+7) . . Q125E
- 11:15, 11 August 2011 (diff | hist) . . (+4,005) . . N Q125E (Created page with "== Structure-based Mutation Analysis == === Mapping onto crystal structure === === Side chain properties === {|class="centered" |[[File:Wildtype1_BCKDHAMinimise.png|thumb|Figu…")
- 11:13, 11 August 2011 (diff | hist) . . (+67) . . Structure-based mutation analysis BCKDHA (→Mutation analysis)
- 11:12, 11 August 2011 (diff | hist) . . (-15) . . M82L (→Structure-based Mutation Analysis)
- 11:11, 11 August 2011 (diff | hist) . . (+335) . . M82L (→gromacs Energy comparison)
- 11:06, 11 August 2011 (diff | hist) . . (+643) . . M82L (→gromacs Energy comparison)
- 10:56, 11 August 2011 (diff | hist) . . (+379) . . M82L (→minimise Energy Comparison)
- 10:47, 11 August 2011 (diff | hist) . . (+2) . . M82L (→foldX Energy Comparison)
- 10:46, 11 August 2011 (diff | hist) . . (+3) . . M82L (→foldX Energy Comparison)
- 10:46, 11 August 2011 (diff | hist) . . (+571) . . M82L (→foldX Energy Comparison)
- 10:36, 11 August 2011 (diff | hist) . . (+289) . . M82L (→Hydrogen Bonding network)
- 10:32, 11 August 2011 (diff | hist) . . (+4) . . M82L (→Hydrogen Bonding network)
- 10:19, 11 August 2011 (diff | hist) . . (-6) . . M82L (→Hydrogen Bonding network)
- 10:12, 11 August 2011 (diff | hist) . . (+15) . . M82L (→gromacs)
- 10:12, 11 August 2011 (diff | hist) . . (+15) . . M82L (→minimise)
- 10:10, 11 August 2011 (diff | hist) . . (-29) . . M82L (→Comparison Energies)
- 10:10, 11 August 2011 (diff | hist) . . (+16) . . M82L (→foldX)
- 09:44, 11 August 2011 (diff | hist) . . (+74) . . Structure-based mutation analysis BCKDHA (→Results)
- 09:43, 11 August 2011 (diff | hist) . . (+4) . . Structure-based mutation analysis BCKDHA (→Results)
- 09:42, 11 August 2011 (diff | hist) . . (+36) . . Structure-based mutation analysis BCKDHA (→Results)
- 09:37, 11 August 2011 (diff | hist) . . (+7) . . Structure-based mutation analysis BCKDHA (→Results)
- 09:30, 11 August 2011 (diff | hist) . . (+1) . . Structure-based mutation analysis BCKDHA (→Results)
- 09:30, 11 August 2011 (diff | hist) . . (+1,263) . . Structure-based mutation analysis BCKDHA (→Y438N)
- 00:32, 11 August 2011 (diff | hist) . . (-165) . . Structure-based mutation analysis BCKDHA (→Mutation analysis)
- 00:31, 11 August 2011 (diff | hist) . . (+142) . . Structure-based mutation analysis BCKDHA (→Mutation analysis)
- 00:28, 11 August 2011 (diff | hist) . . (+2) . . M82L (→minimise)
- 00:28, 11 August 2011 (diff | hist) . . (+1,653) . . N M82L (Created page with "== Structure-based Mutation Analysis == === Mapping onto crystal structure === ===SCWRL === scwrl wt energy? === Hydrogen Bonding network === The following figures show the hyd…")
- 00:14, 11 August 2011 (diff | hist) . . (+165) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 18:54, 10 August 2011 (diff | hist) . . (+33) . . Structure-based mutation analysis BCKDHA (→Wildtype analysis: force fields)
- 18:53, 10 August 2011 (diff | hist) . . (+14) . . Structure-based mutation analysis BCKDHA (→Wildtype analysis: nsteps vs time)
- 18:52, 10 August 2011 (diff | hist) . . (+5) . . Structure-based mutation analysis BCKDHA (→Minimise)
- 18:51, 10 August 2011 (diff | hist) . . (+305) . . Structure-based mutation analysis BCKDHA (→Minimise)
- 18:46, 10 August 2011 (diff | hist) . . (+411) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 18:32, 10 August 2011 (diff | hist) . . (+184) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 18:29, 10 August 2011 (diff | hist) . . (+71) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 18:26, 10 August 2011 (diff | hist) . . (+1) . . Structure-based mutation analysis BCKDHA (→8. Analyzation)
- 18:26, 10 August 2011 (diff | hist) . . (-1) . . Structure-based mutation analysis BCKDHA (→7. System Minimization)
- 18:25, 10 August 2011 (diff | hist) . . (+1) . . Structure-based mutation analysis BCKDHA (→6. grompp)
- 18:24, 10 August 2011 (diff | hist) . . (+4) . . Structure-based mutation analysis BCKDHA (→4.pdb2gmx)
- 18:24, 10 August 2011 (diff | hist) . . (+1) . . Structure-based mutation analysis BCKDHA (→3. SCWRL)
- 18:23, 10 August 2011 (diff | hist) . . (+1) . . Structure-based mutation analysis BCKDHA (→2. repairPDB)
- 18:22, 10 August 2011 (diff | hist) . . (-169) . . Structure-based mutation analysis BCKDHA (→Minimise)
- 18:15, 10 August 2011 (diff | hist) . . (+2) . . Structure-based mutation analysis BCKDHA (→SCWRL)
- 18:07, 10 August 2011 (diff | hist) . . (+24) . . Structure-based mutation analysis BCKDHA (→Structure selection)
- 18:05, 10 August 2011 (diff | hist) . . (+75) . . Structure-based mutation analysis BCKDHA (→Structure selection)
- 17:48, 10 August 2011 (diff | hist) . . (+56) . . Structure-based mutation analysis BCKDHA (→Structure selection)
- 17:41, 10 August 2011 (diff | hist) . . (+424) . . Structure-based mutation analysis BCKDHA (→Structure selection)
- 17:21, 10 August 2011 (diff | hist) . . (+606) . . Structure-based mutation analysis BCKDHA (→Structure selection)
- 21:17, 9 August 2011 (diff | hist) . . (+884) . . Mapping SNPs BCKDHA (→Mutation Analysis)
- 21:09, 9 August 2011 (diff | hist) . . (+1) . . Sequence-based mutation analysis BCKDHA (→Discussion)
- 21:00, 9 August 2011 (diff | hist) . . (+112) . . Mapping SNPs BCKDHA (→Mutation Analysis)
- 20:59, 9 August 2011 (diff | hist) . . (+52) . . Mapping SNPs BCKDHA (→Mutation Analysis)
- 20:50, 9 August 2011 (diff | hist) . . (+347) . . Mapping SNPs BCKDHA (→Mutation Analysis)
- 20:25, 9 August 2011 (diff | hist) . . (-2) . . Mapping SNPs BCKDHA (→HGMD)
- 20:24, 9 August 2011 (diff | hist) . . (+82) . . Mapping SNPs BCKDHA (→dbSNP)
- 20:22, 9 August 2011 (diff | hist) . . (+58) . . Mapping SNPs BCKDHA (→HGMD)
- 20:22, 9 August 2011 (diff | hist) . . (0) . . Mapping SNPs BCKDHA (→References)
- 20:21, 9 August 2011 (diff | hist) . . (+235) . . Mapping SNPs BCKDHA (→Mutation Analysis)
- 18:02, 9 August 2011 (diff | hist) . . (+235) . . Mapping SNPs BCKDHA (→Mutation Analysis)
- 17:57, 9 August 2011 (diff | hist) . . (+89) . . Mapping SNPs BCKDHA (→Disease causing SNPs in HGMD and dbSNP)
- 17:56, 9 August 2011 (diff | hist) . . (+8) . . Mapping SNPs BCKDHA (→SNPs in human)
- 15:39, 9 August 2011 (diff | hist) . . (+50) . . Sequence Alignments BCKDHA (→Discussion)
- 14:50, 9 August 2011 (diff | hist) . . (+205) . . Sequence Alignments BCKDHA (→Functionally important residues)
- 14:44, 9 August 2011 (diff | hist) . . (+125) . . Sequence Alignments BCKDHA (→Functionally important residues)
- 14:41, 9 August 2011 (diff | hist) . . (+238) . . Sequence Alignments BCKDHA (→Functionally important residues)
- 14:37, 9 August 2011 (diff | hist) . . (+143) . . Sequence Alignments BCKDHA (→Functionally important residues)
- 14:35, 9 August 2011 (diff | hist) . . (+59) . . Sequence Alignments BCKDHA (→Discussion)
- 14:32, 9 August 2011 (diff | hist) . . (+245) . . Sequence Alignments BCKDHA (→Discussion)
- 14:29, 9 August 2011 (diff | hist) . . (+22) . . Sequence Alignments BCKDHA (→Muscle)
- 14:27, 9 August 2011 (diff | hist) . . (+18) . . Sequence Alignments BCKDHA (→Cobalt)
- 14:27, 9 August 2011 (diff | hist) . . (+18) . . Sequence Alignments BCKDHA (→T-Coffee 3d)
- 14:26, 9 August 2011 (diff | hist) . . (+18) . . Sequence Alignments BCKDHA (→T-Coffee)
- 14:26, 9 August 2011 (diff | hist) . . (+18) . . Sequence Alignments BCKDHA (→ClustalW)
- 14:18, 9 August 2011 (diff | hist) . . (+91) . . Sequence Alignments BCKDHA (→Sequence searches)
- 14:15, 9 August 2011 (diff | hist) . . (+69) . . Sequence Alignments BCKDHA (→Sequence searches)
- 14:12, 9 August 2011 (diff | hist) . . (+95) . . Sequence Alignments BCKDHA (→Sequence searches)
- 12:33, 9 August 2011 (diff | hist) . . (+26) . . Sequence-based mutation analysis BCKDHA (→Amino Acid Properties)
- 12:33, 9 August 2011 (diff | hist) . . (-46) . . Sequence-based mutation analysis BCKDHA (→Substitution matrices)
- 12:33, 9 August 2011 (diff | hist) . . (+72) . . Sequence-based mutation analysis BCKDHA (→Substitution matrices)
- 12:33, 9 August 2011 (diff | hist) . . (-15) . . Sequence-based mutation analysis BCKDHA (→Multiple Sequence Alignment)
- 12:32, 9 August 2011 (diff | hist) . . (+144) . . Sequence-based mutation analysis BCKDHA (→Multiple Sequence Alignment)
- 12:32, 9 August 2011 (diff | hist) . . (+72) . . Sequence-based mutation analysis BCKDHA (→Polyphen2)
- 12:32, 9 August 2011 (diff | hist) . . (+72) . . Sequence-based mutation analysis BCKDHA (→Comparison of the predicted results of this TASK)
- 12:27, 9 August 2011 (diff | hist) . . (+61) . . Sequence-based mutation analysis BCKDHA (→Multiple Sequence Alignment)
- 12:26, 9 August 2011 (diff | hist) . . (-1) . . Sequence-based mutation analysis BCKDHA (→Substitution matrices)
- 12:26, 9 August 2011 (diff | hist) . . (-2) . . Sequence-based mutation analysis BCKDHA (→Substitution matrices)
- 12:25, 9 August 2011 (diff | hist) . . (+406) . . Sequence-based mutation analysis BCKDHA (→Substitution matrices)
- 09:33, 9 August 2011 (diff | hist) . . (-1) . . Homology based structure predictions BCKDHA (→Template selection)
- 21:11, 8 August 2011 (diff | hist) . . (+24) . . N Molecular Dynamics Analysis BCKDHA (Created page with "== Simulation Quality ==")
- 21:10, 8 August 2011 (diff | hist) . . (+84) . . Normal Mode Analysis BCKDHA (→References)
- 21:10, 8 August 2011 (diff | hist) . . (+203) . . Molecular Dynamics Simulations BCKDHA (→Production run)
- 20:59, 8 August 2011 (diff | hist) . . (0) . . N File:2LYZ mode9 network.png (current)
- 20:59, 8 August 2011 (diff | hist) . . (0) . . N File:2LYZ mode8 network.png (current)
- 20:58, 8 August 2011 (diff | hist) . . (0) . . N File:2LYZ mode7 network.png (current)
- 20:57, 8 August 2011 (diff | hist) . . (+429) . . Normal Mode Analysis BCKDHA (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 20:46, 8 August 2011 (diff | hist) . . (-74) . . Normal Mode Analysis BCKDHA (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 20:43, 8 August 2011 (diff | hist) . . (0) . . N File:2LYZ 2000K mode9.gif (current)
- 20:43, 8 August 2011 (diff | hist) . . (0) . . N File:2LYZ 2000K mode8.gif (current)
- 20:43, 8 August 2011 (diff | hist) . . (0) . . N File:2LYZ 2000K mode7.gif (current)
- 20:42, 8 August 2011 (diff | hist) . . (+3) . . Normal Mode Analysis BCKDHA (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 14:40, 8 August 2011 (diff | hist) . . (+80) . . Normal Mode Analysis BCKDHA (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 14:36, 8 August 2011 (diff | hist) . . (+198) . . Normal Mode Analysis BCKDHA (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 14:12, 8 August 2011 (diff | hist) . . (+561) . . Sequence-based mutation analysis BCKDHA (→Amino Acid Properties)
- 14:08, 8 August 2011 (diff | hist) . . (+364) . . Sequence-based mutation analysis BCKDHA (→Amino Acid Properties)
- 13:57, 8 August 2011 (diff | hist) . . (-111) . . Sequence-based mutation analysis BCKDHA (→Amino Acid Properties)
- 09:50, 8 August 2011 (diff | hist) . . (+163) . . Sequence-based mutation analysis BCKDHA (→Amino Acid Properties)
- 09:48, 8 August 2011 (diff | hist) . . (+280) . . Sequence-based mutation analysis BCKDHA (→General)
- 09:45, 8 August 2011 (diff | hist) . . (+20) . . Sequence-based mutation analysis BCKDHA (→General)
- 09:44, 8 August 2011 (diff | hist) . . (+52) . . Normal Mode Analysis BCKDHA (→References)
- 09:44, 8 August 2011 (diff | hist) . . (+51) . . Molecular Dynamics Simulations BCKDHA (→Production run)
- 09:43, 8 August 2011 (diff | hist) . . (+74) . . Normal Mode Analysis BCKDHA (→oGNM – Gaussian network model)
- 09:41, 8 August 2011 (diff | hist) . . (0) . . Sequence Alignments BCKDHA (→References)
- 09:40, 8 August 2011 (diff | hist) . . (+50) . . Sequence Alignments BCKDHA (→Functionally important residues)
- 09:38, 8 August 2011 (diff | hist) . . (+139) . . Sequence Alignments BCKDHA (→Muscle)
- 09:37, 8 August 2011 (diff | hist) . . (+139) . . Sequence Alignments BCKDHA (→Cobalt)
- 09:37, 8 August 2011 (diff | hist) . . (+152) . . Sequence Alignments BCKDHA (→T-Coffee 3d)
- 09:36, 8 August 2011 (diff | hist) . . (+141) . . Sequence Alignments BCKDHA (→T-Coffee)
- 09:36, 8 August 2011 (diff | hist) . . (+46) . . Sequence Alignments BCKDHA (→ClustalW)
- 09:34, 8 August 2011 (diff | hist) . . (+95) . . Sequence Alignments BCKDHA (→ClustalW)
- 09:32, 8 August 2011 (diff | hist) . . (+70) . . Sequence Alignments BCKDHA (→Multiple Alignments)
- 09:31, 8 August 2011 (diff | hist) . . (+309) . . Sequence Alignments BCKDHA (→Sequence searches)
- 09:26, 8 August 2011 (diff | hist) . . (-1) . . Sequence Alignments BCKDHA (→Sequence searches)
- 09:26, 8 August 2011 (diff | hist) . . (+195) . . Sequence Alignments BCKDHA (→Sequence searches)
- 09:23, 8 August 2011 (diff | hist) . . (+116) . . Sequence Alignments BCKDHA (→Sequence searches)
- 09:21, 8 August 2011 (diff | hist) . . (+136) . . Sequence Alignments BCKDHA (→Sequence searches)
- 09:20, 8 August 2011 (diff | hist) . . (+8) . . Sequence Alignments BCKDHA (→Sequence searches)
- 09:19, 8 August 2011 (diff | hist) . . (+155) . . Sequence Alignments BCKDHA (→Sequence searches)
- 09:16, 8 August 2011 (diff | hist) . . (+47) . . Sequence Alignments BCKDHA (→Sequence searches)
- 09:15, 8 August 2011 (diff | hist) . . (+6) . . Sequence Alignments BCKDHA (→Sequence searches)
- 09:15, 8 August 2011 (diff | hist) . . (+7) . . Sequence Alignments BCKDHA (→Sequence searches)
- 09:14, 8 August 2011 (diff | hist) . . (-6) . . Sequence Alignments BCKDHA (→Sequence searches)
- 09:12, 8 August 2011 (diff | hist) . . (-4) . . Sequence Alignments BCKDHA (→Sequence searches)
- 09:11, 8 August 2011 (diff | hist) . . (+5) . . Sequence Alignments BCKDHA (→Sequence searches)
- 18:18, 7 August 2011 (diff | hist) . . (-2) . . Sequence Alignments BCKDHA (→Sequence searches)
- 18:17, 7 August 2011 (diff | hist) . . (+2) . . Sequence Alignments BCKDHA (→Sequence searches)
- 18:17, 7 August 2011 (diff | hist) . . (-1) . . Sequence Alignments BCKDHA (→Sequence searches)
- 18:13, 7 August 2011 (diff | hist) . . (+93) . . Sequence Alignments BCKDHA (→Sequence searches)
- 22:16, 18 July 2011 (diff | hist) . . (0) . . N File:2LYZ 600K mode9.gif (current)
- 22:13, 18 July 2011 (diff | hist) . . (0) . . N File:2LYZ 600K mode8.gif (current)
- 22:13, 18 July 2011 (diff | hist) . . (0) . . N File:2LYZ 600K mode7.gif (current)
- 22:10, 18 July 2011 (diff | hist) . . (0) . . N File:2LYZ 200K mode9.gif (current)
- 22:08, 18 July 2011 (diff | hist) . . (+422) . . Normal Mode Analysis BCKDHA (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 22:05, 18 July 2011 (diff | hist) . . (0) . . N File:2LYZ 200K mode8.gif (current)
- 22:03, 18 July 2011 (diff | hist) . . (+321) . . Normal Mode Analysis BCKDHA (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 21:58, 18 July 2011 (diff | hist) . . (0) . . N File:2LYZ 200K mode7.gif (current)
- 20:45, 18 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mode11 network.png (current)
- 20:44, 18 July 2011 (diff | hist) . . (+377) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 20:43, 18 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mode10 network.png (current)
- 20:42, 18 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mode9 network.png (current)
- 20:42, 18 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mode8 network.png (current)
- 20:40, 18 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mode7 network.png (current)
- 20:38, 18 July 2011 (diff | hist) . . (0) . . N File:BCKDHA NOMAD mode10.gif (current)
- 20:37, 18 July 2011 (diff | hist) . . (0) . . N File:BCKDHA NOMAD mode9.gif (current)
- 20:37, 18 July 2011 (diff | hist) . . (0) . . N File:BCKDHA NOMAD mode8.gif (current)
- 20:36, 18 July 2011 (diff | hist) . . (0) . . N File:BCKDHA NOMAD mode7.gif (current)
- 20:35, 18 July 2011 (diff | hist) . . (0) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 20:34, 18 July 2011 (diff | hist) . . (0) . . N File:BCKDHA NOMAD mode11.gif (current)
- 20:34, 18 July 2011 (diff | hist) . . (+325) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 13:54, 14 July 2011 (diff | hist) . . (-25) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 13:53, 14 July 2011 (diff | hist) . . (-3) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 13:52, 14 July 2011 (diff | hist) . . (0) . . N File:BCKDHA mode 11.png (current)
- 13:52, 14 July 2011 (diff | hist) . . (0) . . N File:BCKDHA mode 10.png (current)
- 13:52, 14 July 2011 (diff | hist) . . (0) . . N File:BCKDHA mode 9.png (current)
- 13:52, 14 July 2011 (diff | hist) . . (0) . . N File:BCKDHA mode 8.png (current)
- 13:51, 14 July 2011 (diff | hist) . . (0) . . N File:BCKDHA mode 7.png (current)
- 13:51, 14 July 2011 (diff | hist) . . (+609) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 13:43, 14 July 2011 (diff | hist) . . (+228) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 13:39, 14 July 2011 (diff | hist) . . (+65) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 13:37, 14 July 2011 (diff | hist) . . (+13) . . Normal Mode Analysis BCKDHA (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 13:36, 14 July 2011 (diff | hist) . . (+395) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 13:32, 14 July 2011 (diff | hist) . . (+2) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 13:32, 14 July 2011 (diff | hist) . . (+56) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 13:31, 14 July 2011 (diff | hist) . . (+193) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 13:29, 14 July 2011 (diff | hist) . . (+302) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 13:25, 14 July 2011 (diff | hist) . . (+698) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 13:20, 14 July 2011 (diff | hist) . . (+2) . . Normal Mode Analysis BCKDHA (→References)
- 13:20, 14 July 2011 (diff | hist) . . (+32) . . Normal Mode Analysis BCKDHA (→Advantages and Disadvantages from NMA and MD)
- 13:19, 14 July 2011 (diff | hist) . . (+575) . . Normal Mode Analysis BCKDHA (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 13:09, 14 July 2011 (diff | hist) . . (+197) . . Normal Mode Analysis BCKDHA (→All-atom NMA using Gromacs on the NOMAD-Ref server)
- 13:07, 14 July 2011 (diff | hist) . . (+151) . . Normal Mode Analysis BCKDHA (→NOMAD-Ref)
- 11:29, 14 July 2011 (diff | hist) . . (+169) . . Molecular Dynamics Simulations BCKDHA (→Production run)
- 00:15, 13 July 2011 (diff | hist) . . (+8) . . Molecular Dynamics Simulations BCKDHA (→Production run)
- 00:15, 13 July 2011 (diff | hist) . . (+5) . . Molecular Dynamics Simulations BCKDHA (→Production run)
- 00:14, 13 July 2011 (diff | hist) . . (+549) . . Molecular Dynamics Simulations BCKDHA (→Equilibration of system)
- 20:04, 11 July 2011 (diff | hist) . . (-1) . . Maple syrup urine disease 2011 (→TASKS)
- 20:03, 11 July 2011 (diff | hist) . . (+84) . . Maple syrup urine disease 2011 (→TASKS)
- 20:25, 5 July 2011 (diff | hist) . . (+379) . . Structure-based mutation analysis BCKDHA (→5. MDP)
- 20:17, 5 July 2011 (diff | hist) . . (+128) . . Structure-based mutation analysis BCKDHA (→3. SCWRL)
- 20:16, 5 July 2011 (diff | hist) . . (+92) . . Structure-based mutation analysis BCKDHA (→2. repairPDB)
- 20:15, 5 July 2011 (diff | hist) . . (+602) . . Structure-based mutation analysis BCKDHA (→2. repairPDB)
- 19:39, 5 July 2011 (diff | hist) . . (+115) . . Molecular Dynamics Simulations BCKDHA (→Preparation)
- 19:38, 5 July 2011 (diff | hist) . . (+787) . . Molecular Dynamics Simulations BCKDHA (→Create important GROMACS files)
- 19:28, 5 July 2011 (diff | hist) . . (+122) . . Molecular Dynamics Simulations BCKDHA (→Preparation)
- 17:32, 5 July 2011 (diff | hist) . . (+7) . . Molecular Dynamics Simulations BCKDHA (→Preparation)
- 17:32, 5 July 2011 (diff | hist) . . (-102) . . Molecular Dynamics Simulations BCKDHA (→Preparation)
- 17:13, 5 July 2011 (diff | hist) . . (+485) . . Molecular Dynamics Simulations BCKDHA (→Preparation)
- 17:07, 5 July 2011 (diff | hist) . . (+3) . . Molecular Dynamics Simulations BCKDHA (→Preparation)
- 17:07, 5 July 2011 (diff | hist) . . (+532) . . Molecular Dynamics Simulations BCKDHA (→Preparation)
- 16:40, 5 July 2011 (diff | hist) . . (-56) . . Structure-based mutation analysis BCKDHA (→5. MDP)
- 16:39, 5 July 2011 (diff | hist) . . (+15) . . Structure-based mutation analysis BCKDHA (→5. MDP)
- 16:39, 5 July 2011 (diff | hist) . . (+36) . . Structure-based mutation analysis BCKDHA (→5. MDP)
- 16:32, 5 July 2011 (diff | hist) . . (+419) . . N Molecular Dynamics Simulations BCKDHA (Created page with "== Preparation == For the molecular dynamics simulation two mutations should be chosen. We decided to take one mutation, which leads to a drastic change in the amino acid proper…")
- 16:23, 5 July 2011 (diff | hist) . . (+87) . . Structure-based mutation analysis BCKDHA (→Links)
- 19:04, 4 July 2011 (diff | hist) . . (+190) . . Structure-based mutation analysis BCKDHA (→Wildtype analysis: nsteps vs time)
- 19:02, 4 July 2011 (diff | hist) . . (+534) . . Structure-based mutation analysis BCKDHA (→Wildtype analysis: nsteps vs time)
- 18:58, 4 July 2011 (diff | hist) . . (0) . . N File:BCKDHA nstepsVsTime.png (current)
- 18:57, 4 July 2011 (diff | hist) . . (+363) . . Structure-based mutation analysis BCKDHA (→Wildtype analysis: nsteps vs time)
- 17:27, 4 July 2011 (diff | hist) . . (+14) . . Structure-based mutation analysis BCKDHA (→5. MDP)
- 17:27, 4 July 2011 (diff | hist) . . (+48) . . Structure-based mutation analysis BCKDHA (→5. MDP)
- 17:26, 4 July 2011 (diff | hist) . . (-4) . . Structure-based mutation analysis BCKDHA (→6. grompp)
- 21:48, 3 July 2011 (diff | hist) . . (+169) . . Homology based structure predictions BCKDHA (→1.Calculation of models)
- 21:46, 3 July 2011 (diff | hist) . . (+19) . . Structure-based mutation analysis BCKDHA (→Wildtype analysis: nsteps vs time)
- 21:45, 3 July 2011 (diff | hist) . . (+552) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 21:36, 3 July 2011 (diff | hist) . . (+1,066) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 21:24, 3 July 2011 (diff | hist) . . (+1,313) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 21:02, 3 July 2011 (diff | hist) . . (+187) . . Structure-based mutation analysis BCKDHA (→Structure selection)
- 20:57, 3 July 2011 (diff | hist) . . (+10) . . Structure-based mutation analysis BCKDHA (→Structure selection)
- 19:02, 1 July 2011 (diff | hist) . . (+178) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 19:00, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA mutations activeSites.png (current)
- 18:55, 1 July 2011 (diff | hist) . . (+84) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 18:35, 1 July 2011 (diff | hist) . . (+108) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 18:28, 1 July 2011 (diff | hist) . . (0) . . File:BCKDHA Mut364.png (uploaded a new version of "File:BCKDHA Mut364.png") (current)
- 18:28, 1 July 2011 (diff | hist) . . (0) . . File:BCKDHA Mut281.png (uploaded a new version of "File:BCKDHA Mut281.png") (current)
- 18:27, 1 July 2011 (diff | hist) . . (0) . . File:BCKDHA Mut220.png (uploaded a new version of "File:BCKDHA Mut220.png") (current)
- 18:27, 1 July 2011 (diff | hist) . . (0) . . File:BCKDHA Mut219.png (uploaded a new version of "File:BCKDHA Mut219.png") (current)
- 18:27, 1 July 2011 (diff | hist) . . (0) . . File:BCKDHA Mut204.png (uploaded a new version of "File:BCKDHA Mut204.png") (current)
- 18:27, 1 July 2011 (diff | hist) . . (0) . . File:BCKDHA Mut121.png (uploaded a new version of "File:BCKDHA Mut121.png") (current)
- 18:25, 1 July 2011 (diff | hist) . . (0) . . File:BCKDHA Mut80.png (uploaded a new version of "File:BCKDHA Mut80.png") (current)
- 18:25, 1 July 2011 (diff | hist) . . (0) . . File:BCKDHA Mut37.png (uploaded a new version of "File:BCKDHA Mut37.png") (current)
- 18:24, 1 July 2011 (diff | hist) . . (0) . . File:BCKDHA Mut393.png (uploaded a new version of "File:BCKDHA Mut393.png") (current)
- 18:16, 1 July 2011 (diff | hist) . . (+1,858) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 18:13, 1 July 2011 (diff | hist) . . (0) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 18:12, 1 July 2011 (diff | hist) . . (+225) . . Structure-based mutation analysis BCKDHA (→Mapping of the mutations on the crystal structure)
- 18:10, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Wt393.png (current)
- 18:10, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Wt364.png (current)
- 18:10, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Wt281.png (current)
- 18:10, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Wt220.png (current)
- 18:09, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Wt219.png (current)
- 18:09, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Wt204.png (current)
- 18:09, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Wt121.png (current)
- 18:09, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Wt80.png (current)
- 18:08, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Wt37.png (current)
- 18:08, 1 July 2011 (diff | hist) . . (0) . . N File:Wt37.png (current)
- 18:08, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mut393.png
- 18:08, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mut364.png
- 18:08, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mut281.png
- 18:08, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mut220.png
- 18:07, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mut219.png
- 18:07, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mut204.png
- 18:07, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mut121.png
- 18:06, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mut80.png
- 18:06, 1 July 2011 (diff | hist) . . (0) . . N File:BCKDHA Mut37.png
- 18:04, 1 July 2011 (diff | hist) . . (+2) . . Structure-based mutation analysis BCKDHA
- 17:04, 1 July 2011 (diff | hist) . . (+238) . . Structure-based mutation analysis BCKDHA (→Wildtype analysis: force fields)
- 17:03, 1 July 2011 (diff | hist) . . (+157) . . Structure-based mutation analysis BCKDHA (→Wildtype analysis: force fields)
- 17:02, 1 July 2011 (diff | hist) . . (0) . . N File:Energy bckdha opls.png (current)
- 17:02, 1 July 2011 (diff | hist) . . (0) . . N File:Energy bckdha charmm27.png (current)
- 17:01, 1 July 2011 (diff | hist) . . (0) . . N File:Energy bckdha amber03.png (current)
