Sequence-based mutation analysis BCKDHA

From Bioinformatikpedia
Revision as of 16:45, 21 June 2011 by Demel (talk | contribs) (Subset of mutations)

Subset of mutations

Reference amino acid Mutated amino acid BLOSUM62 PAM1 PAM250
Position Residue Properties Structure Residue Properties Structure
29 G E
125 Q E
166 Y N
249 G S
264 C W
265 R W
326 I T
361 I V
409 F C
438 Y N


PSSM

PsiBlast was run using the following command: blastpgp -i sequence.fasta -j 5 -d /data/blast/nr/nr -C profile.ckp

SNAP

SIFT

Polyphen2