Difference between revisions of "Secondary Structure Prediction BCKDHA"

From Bioinformatikpedia
(Phobius and Polyphobius)
(Phobius and Polyphobius)
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!colspan=4" test
 
!colspan=4" test
 
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|Signal | 1 | 34 |
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|Signal
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| 1
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| 34
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|Region | 1 | 16 | N-Region
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|Region
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| 1
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| 16
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| N-Region
 
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|Region | 17 | 25 | H-Region
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|Region
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| 17
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| 25
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| H-Region
 
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|Region | 26 | 34 | C-Region
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|Region
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| 26
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| 34
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| C-Region
 
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| TOPO_DOM | 35 | 445 | non cytoplasmic
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| TOPO_DOM
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| 35
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| 445
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| non cytoplasmic
 
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Revision as of 13:07, 24 May 2011

1. Secondary structure prediction

2. Prediction of disordered regions

3. Prediction of transmembrane alpha-helices and signal peptides

Phobius and Polyphobius

Phobius predicted a signal peptide with about 90% probability at the beginning of the sequence. The predicted signal peptide is 34 amino acids long. The rest of the amino acid is a non cytoplasmic protein sequence. No part of the protein is predicted to be transmembrane spanning.

colspan=4" test
Signal 1 34
Region 1 16 N-Region
Region 17 25 H-Region
Region 26 34 C-Region
TOPO_DOM 35 445 non cytoplasmic

4. Prediction of GO terms