Difference between revisions of "Secondary Structure Prediction BCKDHA"

From Bioinformatikpedia
(3. Prediction of transmembrane alpha-helices and signal peptides)
(Phobius and Polyphobius)
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=== Phobius and Polyphobius ===
 
=== Phobius and Polyphobius ===
 
Phobius predicted a signal peptide with about 90% probability at the beginning of the sequence. The predicted signal peptide is 34 amino acids long.
 
Phobius predicted a signal peptide with about 90% probability at the beginning of the sequence. The predicted signal peptide is 34 amino acids long.
The rest of the amino acid is a non cytoplasmic protein sequence.
+
The rest of the amino acid is a non cytoplasmic protein sequence. No part of the protein is predicted to be transmembrane spanning.
   
 
{|
 
{|
!colspan=4" sp|P12694|ODBA_HUMAN
+
!colspan=4" test
 
|-
 
|-
 
|Signal | 1 | 34 |
 
|Signal | 1 | 34 |

Revision as of 13:02, 24 May 2011

1. Secondary structure prediction

2. Prediction of disordered regions

3. Prediction of transmembrane alpha-helices and signal peptides

Phobius and Polyphobius

Phobius predicted a signal peptide with about 90% probability at the beginning of the sequence. The predicted signal peptide is 34 amino acids long. The rest of the amino acid is a non cytoplasmic protein sequence. No part of the protein is predicted to be transmembrane spanning.

colspan=4" test
1 | 34 |
1 | 16 | N-Region
17 | 25 | H-Region
26 | 34 | C-Region
35 | 445 | non cytoplasmic

4. Prediction of GO terms