ProtFun2.2 output

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  ProtFun 2.2 predictions for sp_P06865_H

>sp_P06865_H

  1. Functional category Prob Odds
 Amino_acid_biosynthesis              0.161    7.331
 Biosynthesis_of_cofactors            0.332    4.609
 Cell_envelope                     => 0.804   13.186
 Cellular_processes                   0.110    1.506
 Central_intermediary_metabolism      0.432    6.856
 Energy_metabolism                    0.113    1.259
 Fatty_acid_metabolism                0.019    1.427
 Purines_and_pyrimidines              0.519    2.136
 Regulatory_functions                 0.018    0.111
 Replication_and_transcription        0.073    0.271
 Translation                          0.040    0.904
 Transport_and_binding                0.685    1.670
  1. Enzyme/nonenzyme Prob Odds
 Enzyme                            => 0.792    2.764
 Nonenzyme                            0.208    0.292
  1. Enzyme class Prob Odds
 Oxidoreductase (EC 1.-.-.-)          0.143    0.685
 Transferase    (EC 2.-.-.-)          0.201    0.582
 Hydrolase      (EC 3.-.-.-)          0.329    1.039
 Lyase          (EC 4.-.-.-)          0.054    1.143
 Isomerase      (EC 5.-.-.-)          0.027    0.856
 Ligase         (EC 6.-.-.-)       => 0.085    1.661
  1. Gene Ontology category Prob Odds
 Signal_transducer                    0.083    0.389
 Receptor                             0.105    0.617
 Hormone                              0.001    0.206
 Structural_protein                   0.010    0.357
 Transporter                          0.024    0.222
 Ion_channel                          0.018    0.310
 Voltage-gated_ion_channel            0.002    0.082
 Cation_channel                       0.010    0.218
 Transcription                        0.058    0.453
 Transcription_regulation             0.026    0.205
 Stress_response                      0.044    0.500
 Immune_response                      0.014    0.167
 Growth_factor                        0.005    0.372
 Metal_ion_transport                  0.009    0.020


The individual features used by ProtFun 2.2 rendered the following output:

Feature 	Output summary 	Full output
   SignalP 3.0 	  Most likely cleavage site between pos. 22 and 23: ATA-LW 	details
   ProP 1.0 	  No propeptide cleavage sites predicted 	details
   TargetP 1.1 	  No high confidence targeting predition 	details
   NetPhos 2.0 	  22 putative phosphorylation sites at positions 59 112 149 185 279 284 486 501 84 119 259 275 445 529 37 213 227 298 316 355 435 463 	details
   NetOGlyc 3.1 	  1 putative O-glycosylated site at position 275 	details
   NetNGlyc 1.0 	  4 putative N-glycosylated sites at positions 115 157 291 295 	details
   TMHMM 2.0 	  No TM helices predicted 	details

NOTE 1: The individual features shown above are not all used in all the ProtFun predictions as their discriminatory power may be low for some categories. However, they are all included here for convenience. NOTE 2: The individual feature output shown below was generated with the settings needed by ProtFun. If you prefer other settings e.g. including graphics please click on the name of the specific feature in the table above and resubmit your sequence customizing the run to taste. The possible settings and the output format of each server are explained in detail on its main page.