Difference between revisions of "Hemochromatosis ALL SNP TABLE"

From Bioinformatikpedia
 
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<figtable id="all_snps">
 
<figtable id="all_snps">
{| class="wikitable" style="width: 500px; margin: 1em 1em 1em 0; border-collapse: collapse; border-style: solid; border-width:0px; border-color: #000"
+
{| class="wikitable" style="width: 600px; margin: 1em 1em 1em 0; border-collapse: collapse; border-style: solid; border-width:0px; border-color: #000"
 
|-
 
|-
 
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |Position
 
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |Position
 
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |Amino acid change
 
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |Amino acid change
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |HGMD/dbSNP ID
+
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |Type
  +
! style="text-align:left; border-style: solid; border-width: 1px 1px 2px 1px" |HGMD/dbSNP id
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |6
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |6
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Ser
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Ser
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM032270,rs149342416
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM032270,rs149342416
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |7
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |7
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Pro-Pro
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Pro-Pro
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs114758821
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs114758821
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |17
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |17
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Thr-Ile
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Thr-Ile
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs143662783
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs143662783
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |23
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |23
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-His
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs148161858
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs148161858
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |26
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |26
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Leu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Leu
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |35
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |35
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Met-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Met-Thr
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs2242956
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs2242956
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |43
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |43
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gly-Asp
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gly-Asp
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |53
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |53
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Met
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Met
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM994469,rs28934889
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM994469,rs28934889
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |58
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |58
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Phe-Phe
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Phe-Phe
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs147297176
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs147297176
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |59
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |59
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Met
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Met
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM994470,rs28934890,rs111033557
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM994470,rs28934890,rs111033557
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |63
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |63
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |His-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |His-His
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |HM971246,rs147426902
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |HM971246,rs147426902
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |63
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |63
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |His-Asp
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |His-Asp
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM960827,rs1799945
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM960827,rs1799945
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |65
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |65
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ser-Cys
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ser-Cys
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM990718,rs1800730
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM990718,rs1800730
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |66
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |66
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Cys
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Cys
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM033969
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM033969
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |66
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |66
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Glu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Glu
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |67
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |67
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-His
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs139523708
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs139523708
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |71
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |71
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Term
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Term
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Nonsense
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM020721
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM020721
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |76
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |76
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ser-Ser
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ser-Ser
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs62625342
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs62625342
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |93
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |93
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gly-Arg
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gly-Arg
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM990719,rs28934597
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM990719,rs28934597
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |100
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |100
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ala
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ala
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |103
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |103
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Trp-Ala
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Trp-Ala
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |105
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |105
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ile-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ile-Thr
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM990720,rs28934596
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM990720,rs28934596
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |106
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |106
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Met-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Met-Thr
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |127
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |127
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gln-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gln-His
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM990721,rs28934595
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM990721,rs28934595
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |160
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |160
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Pro-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Pro-Thr
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs149662565
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs149662565
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |162
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |162
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Ser
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Ser
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs145475682
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs145475682
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |162
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |162
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Ala
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Ala
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs148480830
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs148480830
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |163
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |163
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Trp-Ala
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Trp-Ala
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |166
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |166
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Lys-Glu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Lys-Glu
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs144170531
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs144170531
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |168
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |168
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Gln
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Gln
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM004810,rs146519482
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM004810,rs146519482
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |168
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |168
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Term
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Term
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Nonsense
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM004106
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM004106
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |169
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |169
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Trp-Term
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Trp-Term
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Nonsense
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM004107
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM004107
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |176
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |176
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Val
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Val
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM015326
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM015326
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |183
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |183
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Leu-Pro
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Leu-Pro
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM081301
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM081301
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |188
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |188
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Pro-Val
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Pro-Val
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |192
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |192
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gln-Term
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gln-Term
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Nonsense
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs140957442
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs140957442
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |217
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |217
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Thr-Ile
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Thr-Ile
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs4986950
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs4986950
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |224
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |224
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Gly
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Gly
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |224
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |224
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Gln
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Gln
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM034097,rs62625346
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM034097,rs62625346
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |224
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |224
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Trp
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Trp
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs144797937
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs144797937
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |230
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |230
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Tyr-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Tyr-His
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |245
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |245
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Pro-Ala
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Pro-Ala
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs140515012
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs140515012
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |248
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |248
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ala-Thr
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |251
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |251
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Phe-Leu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Phe-Leu
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs150402693
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs150402693
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |252
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |252
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Gly
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Gly
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs138176635
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs138176635
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |256
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |256
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ala
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ala
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |259
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |259
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Asn-Ser
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Asn-Ser
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs143846467
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs143846467
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |272
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |272
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Leu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Leu
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM024530
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM024530
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |275
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |275
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gly-Glu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gly-Glu
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |277
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |277
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Lys
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Lys
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM994771,rs140080192
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM994771,rs140080192
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |282
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |282
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Cys-Ser
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Cys-Ser
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM004391
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM004391
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |282
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |282
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Cys-Tyr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Cys-Tyr
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM960828,rs1800562
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM960828,rs1800562
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |283
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |283
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gln-Pro
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Gln-Pro
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM032271,rs111033563
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM032271,rs111033563
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |295
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |295
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ala
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ala
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |HM030028,rs143175221
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |HM030028,rs143175221
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |298
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |298
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Glu
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Glu-Glu
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs114038675
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs114038675
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |311
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |311
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ser-Arg
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ser-Arg
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |315
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |315
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Val
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Val
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs148632352
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs148632352
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |315
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |315
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Gly
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Gly
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs147519426
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs147519426
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |318
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |318
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ile
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Val-Ile
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs141229562
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs141229562
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |322
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |322
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ile-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ile-Thr
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs150716212
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs150716212
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |327
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |327
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ile-Thr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Ile-Thr
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs138993448
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs138993448
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |330
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |330
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Met
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-Met
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM990722,rs111033558
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |CM990722,rs111033558
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |339
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |339
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Met-Val
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Met-Val
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |N/A
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |342
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |342
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Tyr-Tyr
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Tyr-Tyr
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs35201683
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs35201683
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |342
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |342
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Tyr-Term
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Tyr-Term
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Nonsense
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs62625348
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs62625348
 
|-
 
|-
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |347
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |347
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-His
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Arg-His
  +
| style="border-style: solid; border-width: 1px 1px 1px 1px" |Non-Synonymous
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs146508927
 
| style="border-style: solid; border-width: 1px 1px 1px 1px" |rs146508927
 
|-
 
|-

Latest revision as of 17:48, 10 June 2012

<figtable id="all_snps">

Position Amino acid change Type HGMD/dbSNP id
6 Arg-Ser Non-Synonymous CM032270,rs149342416
7 Pro-Pro Synonymous rs114758821
17 Thr-Ile Non-Synonymous rs143662783
23 Arg-His Non-Synonymous rs148161858
26 Arg-Leu Non-Synonymous N/A
35 Met-Thr Non-Synonymous rs2242956
43 Gly-Asp Non-Synonymous N/A
53 Val-Met Non-Synonymous CM994469,rs28934889
58 Phe-Phe Synonymous rs147297176
59 Val-Met Non-Synonymous CM994470,rs28934890,rs111033557
63 His-His Synonymous HM971246,rs147426902
63 His-Asp Non-Synonymous CM960827,rs1799945
65 Ser-Cys Non-Synonymous CM990718,rs1800730
66 Arg-Cys Non-Synonymous CM033969
66 Arg-Glu Non-Synonymous N/A
67 Arg-His Non-Synonymous rs139523708
71 Arg-Term Nonsense CM020721
76 Ser-Ser Synonymous rs62625342
93 Gly-Arg Non-Synonymous CM990719,rs28934597
100 Val-Ala Non-Synonymous N/A
103 Trp-Ala Non-Synonymous N/A
105 Ile-Thr Non-Synonymous CM990720,rs28934596
106 Met-Thr Non-Synonymous N/A
127 Gln-His Non-Synonymous CM990721,rs28934595
160 Pro-Thr Non-Synonymous rs149662565
162 Ala-Ser Non-Synonymous rs145475682
162 Ala-Ala Synonymous rs148480830
163 Trp-Ala Non-Synonymous N/A
166 Lys-Glu Non-Synonymous rs144170531
168 Glu-Gln Non-Synonymous CM004810,rs146519482
168 Glu-Term Nonsense CM004106
169 Trp-Term Nonsense CM004107
176 Ala-Val Non-Synonymous CM015326
183 Leu-Pro Non-Synonymous CM081301
188 Pro-Val Non-Synonymous N/A
192 Gln-Term Nonsense rs140957442
217 Thr-Ile Non-Synonymous rs4986950
224 Arg-Gly Non-Synonymous N/A
224 Arg-Gln Non-Synonymous CM034097,rs62625346
224 Arg-Trp Non-Synonymous rs144797937
230 Tyr-His Non-Synonymous N/A
245 Pro-Ala Non-Synonymous rs140515012
248 Ala-Thr Non-Synonymous N/A
251 Phe-Leu Non-Synonymous rs150402693
252 Glu-Gly Non-Synonymous rs138176635
256 Val-Ala Non-Synonymous N/A
259 Asn-Ser Non-Synonymous rs143846467
272 Val-Leu Non-Synonymous CM024530
275 Gly-Glu Non-Synonymous N/A
277 Glu-Lys Non-Synonymous CM994771,rs140080192
282 Cys-Ser Non-Synonymous CM004391
282 Cys-Tyr Non-Synonymous CM960828,rs1800562
283 Gln-Pro Non-Synonymous CM032271,rs111033563
295 Val-Ala Non-Synonymous HM030028,rs143175221
298 Glu-Glu Synonymous rs114038675
311 Ser-Arg Non-Synonymous N/A
315 Val-Val Synonymous rs148632352
315 Val-Gly Non-Synonymous rs147519426
318 Val-Ile Non-Synonymous rs141229562
322 Ile-Thr Non-Synonymous rs150716212
327 Ile-Thr Non-Synonymous rs138993448
330 Arg-Met Non-Synonymous CM990722,rs111033558
339 Met-Val Non-Synonymous N/A
342 Tyr-Tyr Synonymous rs35201683
342 Tyr-Term Nonsense rs62625348
347 Arg-His Non-Synonymous rs146508927
Table 1: A list of all unique SNPs for HFE from HGMD, dbSNP, and SNPdbe.

</figtable>