Gaucher Disease: Task 02 - Lab Journal

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Revision as of 15:33, 19 May 2013 by Kalemanovm (talk | contribs)

Sequence Searches

Runs

The script run.pl was written and used for the runs. PSSM files - a3m and hhr for HHblits, chk ("checkpoint") and PSSM for Psi-BLAST were created in order to start the search against another database, from big_80 to big for Psi-BLAST and later against a PDB database for the evaluation.

Comparison

The results were parsed and analysed using the script parse_output.pl.