Difference between revisions of "Fabry:Sequence-based analyses"

From Bioinformatikpedia
m
(GOPET)
Line 13: Line 13:
 
== GO terms ==
 
== GO terms ==
 
=== GOPET ===
 
=== GOPET ===
  +
Searching the GOPET annotation tool with the AGAL_HUMAN [[Alpha-galactosidase_sequence|sequence]] revealed 5 GOIds, which are displayed in <xr id="Tab:GOPET"/>..
  +
  +
{| class="wikitable" id = "Tab:GOPET"
  +
!colspan="6"|Result for GOPET search
  +
|-
  +
!GOid
  +
!Aspect
  +
!Confidence
  +
!GO term
  +
|-
  +
|GO:0016798
  +
|Molecular Function Ontology (F)
  +
|98%
  +
|hydrolase activity acting on glycosyl bonds
  +
|-
  +
|}
  +
 
=== ProtFun2.0 ===
 
=== ProtFun2.0 ===
 
=== Pfam ===
 
=== Pfam ===

Revision as of 17:42, 8 May 2012

The following analyses were performed on the basis of the α-Galactosidase A sequence.

Secondary structure

Disorder

Transmembrane helices

Signal peptides

GO terms

GOPET

Searching the GOPET annotation tool with the AGAL_HUMAN sequence revealed 5 GOIds, which are displayed in <xr id="Tab:GOPET"/>..

Result for GOPET search
GOid Aspect Confidence GO term
GO:0016798 Molecular Function Ontology (F) 98% hydrolase activity acting on glycosyl bonds

ProtFun2.0

Pfam