Difference between revisions of "Canavan Task 10 - Molecular Dynamics Simulations"

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(Created page with "==Protocol== Further information can be found in the protocol.")
 
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Further information can be found in the [[CD_task10_protocol|protocol]].
 
Further information can be found in the [[CD_task10_protocol|protocol]].
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==GMXCheck==
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===WT===
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gmxcheck -f 2O4H_chainA_md.xtc
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There are 2000 time frames, with a resolution of 5 psec. Therefore the whole simulation ran for 10000 psec = 10 nsec.

Revision as of 21:39, 3 July 2012

Protocol

Further information can be found in the protocol.

GMXCheck

WT

gmxcheck -f 2O4H_chainA_md.xtc

There are 2000 time frames, with a resolution of 5 psec. Therefore the whole simulation ran for 10000 psec = 10 nsec.