Difference between revisions of "CD task4 protocol"
From Bioinformatikpedia
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We modified the scripts provided by the [[Using_Modeller_for_TASK_4 | tutorial]] to suit our demands. |
We modified the scripts provided by the [[Using_Modeller_for_TASK_4 | tutorial]] to suit our demands. |
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+ | ==Target== |
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+ | The sequence of out target Aspartoacylase saved in .pir format: |
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+ | >P1;p45381 |
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+ | sequence:p45381:::::::0.00: 0.00 |
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+ | MTSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKK |
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+ | CTRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTS |
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+ | NMGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVG |
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+ | PQPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIA |
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+ | AIIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTK |
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+ | LTLNAKSIRCCLH |
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+ | ==Alignment== |
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==Default settings== |
==Default settings== |
Revision as of 15:28, 29 May 2012
Modeller
We modified the scripts provided by the tutorial to suit our demands.
Target
The sequence of out target Aspartoacylase saved in .pir format:
>P1;p45381 sequence:p45381:::::::0.00: 0.00 MTSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKK CTRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTS NMGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVG PQPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIA AIIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTK LTLNAKSIRCCLH