Introduction
Elastic and Gaussian Network Models
WEBnm@
WEBnm@ is a web-server which provides automated computation and analysis of low-frequency normal modes of proteins. <ref>Hollup SM, Sælensminde G, Reuter N. WEBnm@: a web application for normal mode analysis of proteins BMC Bioinformatics. 2005 Mar 11;6(1):52 </ref>
Results
Figure 1: Normal Mode 7 calculated with WEBnm@
Figure 2: Normal Mode 8 calculated with WEBnm@
Figure 3: Normal Mode 9 calculated with WEBnm@
Figure 4: Normal Mode 10 calculated with WEBnm@
Figure 5: Normal Mode 11 calculated with WEBnm@
elNémo
Results
Figure 6: Normal Mode 7 calculated with
elNémo
Figure 7: Normal Mode 8 calculated with
elNémo
Figure 8: Normal Mode 9 calculated with
elNémo
Figure 9: Normal Mode 10 calculated with
elNémo
Figure 10: Normal Mode 11 calculated with
elNémo
Discussion
Anisotropic Network Model
oGNM
NOMAD-Ref
Discussion
All-atom NMA
Comparison NMA / MD