Sequence-based mutation analysis HEXA/Mutation Summary
From Bioinformatikpedia
Visualisation of the mutations
SNP-id | mutation codon | picture original aa | picture mutated aa | combined picture |
rs4777505 | Asn -> Ser | |||
rs121907979 | Leu -> Arg | |||
rs61731240 | His -> Asp | |||
rs121907974 | Phe -> Ser | |||
rs61747114 | Leu -> Phe | |||
rs1054374 | Ser -> Ile | |||
rs121907967 | Trp -> TER | |||
rs1800430 | Asn -> Asp | |||
rs121907982 | Ile -> Val | |||
rs121907968 | Trp -> Arg |
[Back to Sequence-based mutation analysis]
Substitutions Matrices
SNP-id | mutation codon | PAM 1 | Pam 250 | BLOSOUM 62 | ||||||
value aa | most frequent substitution | rarest substitution | value aa | most frequent substitution | rarest substitution | value aa | most frequent substitution | rarest substitution | ||
rs4777505 | Asn -> Ser | 20 | 36 (Asp) | 0 (Cys, Met) | 5 | 7 (Asp) | 2 (Cys, Leu, Phe, Trp) | 1 | 1 (Asp, His, Ser) | -4 (Trp) |
rs121907979 | Leu -> Arg | 1 | 22 (Ile) | 0 (Asp, Cys) | 4 | 20 (Met) | 2 (Cys) | -2 | 0 (Phe) | -4 (Asp, Gly) |
rs61731240 | His -> Asp | 3 | 20 (Gln) | 0 (Ile, Met) | 4 | 7 (Gln) | 2 (Ala, Cys, Gly, Ile, Leu, Met, Phe, Thr, Trp, Val) | -1 | 2 (Tyr) | -3 (Cys, Ile, Leu, Val) |
rs121907974 | Phe -> Ser | 2 | 28 (Tyr) | 0 (Asp, Cys, Glu, Lys, Pro, Val) | 2 | 20 (Tyr) | 1 (Arg, Asp, Cys, Gln, Glu, Gly, Lys, Pro) | -2 | 3 (Tyr) | -4 (Pro) |
rs61747114 | Leu -> Phe | 13 | 45 (Met) | 0 (Asp, Cys) | 13 | 20 (Met) | 2 (Cys) | 0 | 2 (Ile, Met) | -4 (Asp, Gly) |
rs1054374 | Ser -> Ile | 2 | 38 (Thr) | 1 (Leu) | 5 | 9 (Ala, Gly, Pro, Thr) | 3 (Phe) | -2 | 1 (Ala, Asn, Thr) | -3 (Trp) |
rs121907967 | Trp -> TER | X | 2 (Arg) | 0 (all, except Arg, Phe, Ser, Tyr) | X | 2 (Arg) | 0 (all, except Arg, His, Leu, Phe, Ser, Tyr) | X | 2 (Tyr) | -4 (Asn, Asp, Pro) |
rs1800430 | Asn -> Asp | 36 | 36 (Asp) | 0 (Cys, Met) | 7 | 7 (Asp) | 2 (Cys, Leu, Phe, Trp) | 1 | 1 (Asp, His, Ser) | -4 (Trp) |
rs121907982 | Ile -> Val | 33 | 33 (Val) | 0 (Gly, Pro, Trp) | 9 | 9 (Val) | 1 (Trp) | 3 | 3 (Val) | -4 (Gly) |
rs121907968 | Trp -> Arg | 2 | 2 (Arg) | 0 (all, except Arg, Phe, Ser, Tyr) | 2 | 2 (Arg) | 0 (all, except Arg, His, Leu, Phe, Ser, Tyr) | -3 | 2 (Tyr) | -4 (Asn, Asp, Pro) |