Task 5: Homology Modeling

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lab journal task 5

Contents

1 Modeller
- 1.1 Single template
2 Swiss-Modell
3 I-TASSER

Modeller

Single template

Target: 1A6Z chain A

Template	SeqID	std Alignment	2d alignment	curated Alignment
1QVO_A	0.39
1S7X_A	0.29
1cd1_A	0.21

MSA:

"close" homology
1rjz_D	0.34
1zag_A	0.36
1QVO_A	0.39

distant homology:
3huj_C	0.23
1cd1_A	0.21
1VZY_A	0.14

MIX:

1cd1_A 0.21

1QVO_A 0.39

Swiss-Modell

I-TASSER

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