Multiple Sequence Alignment: T-Coffee - set 1
From Bioinformatikpedia
The native protein is colored red in the Alignment.
CLUSTAL FORMAT for T-COFFEE Version_8.47 [1] [MODE: ], CPU=0.12 sec, SCORE=98, Nseq=10, Len=621 P04062 -------------------------------------------------- tr|A9UD35|A9UD35_DELDE -------------------------------------------------- tr|D1L2S0|D1L2S0_BALPH -------------------------------------------------- pdb|pdb|3gxi_A -------------------------------------------------- pdb|pdb|2nt1_A -------------------------------------------------- tr|F6WDY8|F6WDY8_HORSE -------------------------------------------------- sp|Q2KHZ8|GLCM_BOVIN -------------------------------------------------- tr|F5CB27|F5CB27_DELCA -------------------------------------------------- tr|F5H241|F5H241_HUMAN -------------------------------------------------- tr|B7Z6S9|B7Z6S9_HUMAN MSDRLFSNPGPAPTPQGCFSRGCGWSGCILPSESYCAGPQSPVPPRRLCR P04062 -----------------------------------MEFSSPSREECPKPL tr|A9UD35|A9UD35_DELDE -------------------------------------------------- tr|D1L2S0|D1L2S0_BALPH -------------------------------------------------- pdb|pdb|3gxi_A -------------------------------------------------- pdb|pdb|2nt1_A -------------------------------------------------- tr|F6WDY8|F6WDY8_HORSE -----------------------------------MELSSPSREGCLKCP sp|Q2KHZ8|GLCM_BOVIN -----------------------------------MELSSPSREEYPMPR tr|F5CB27|F5CB27_DELCA -------------------------------------------------- tr|F5H241|F5H241_HUMAN -----------------------------------MEFSSPSREECPKPL tr|B7Z6S9|B7Z6S9_HUMAN LRWDFVLPPVGAAVSLRRRDSGTPVVFSSSNDPEGMEFSSPSREECPKPL P04062 SRVSIMAGSLTGLLLLQAVSWASGARPCIPKSFGYSSVVCVCNATYCDSF tr|A9UD35|A9UD35_DELDE -----------------------------------------CNATYCDSL tr|D1L2S0|D1L2S0_BALPH -------------------------------------VVCVCNATYCDSL pdb|pdb|3gxi_A ------------------------ARPCIPKSFGYSSVVCVCNATYCDSF pdb|pdb|2nt1_A ------------------------ARPCIPKSFGYSSVVCVCNATYCDSF tr|F6WDY8|F6WDY8_HORSE GRVGIMAASFMGLLLLQAVSRASGARPCSPKSFGYSSVVCVCNATYCDSL sp|Q2KHZ8|GLCM_BOVIN GRVGIMAASLMGLLLLHTVSWVSGARPCSPKSFGYSSVVCVCNGTYCDSL tr|F5CB27|F5CB27_DELCA -----------------------------------------CNATYCDSL tr|F5H241|F5H241_HUMAN SRVSIMAGSLTGLLLLQAVSWA---------------------------- tr|B7Z6S9|B7Z6S9_HUMAN SRVSIMAGSLTGLLLLQAVSWASGARPCIPKSFGYSSVVCVCNATYCDSF P04062 DPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQ tr|A9UD35|A9UD35_DELDE DPLTLPDPGTFSRFESTRSGRRMELSLGTIQANRTGTGLLLTLQPDQKFQ tr|D1L2S0|D1L2S0_BALPH DPLTLPDPGTFSRFESTRSGRRMELSLGAIQANRTGTGLLLTLQP----- pdb|pdb|3gxi_A DPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQ pdb|pdb|2nt1_A DPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQ tr|F6WDY8|F6WDY8_HORSE DPLTLPAPGTFSRYESTRSGRRMELSLGAIQANRTGTGLLLTLQPDQKFQ sp|Q2KHZ8|GLCM_BOVIN DPLTLPDPGTFSRFESTRSGRRMELSLGTIQANRTGTGLLLTLQPDQKFQ tr|F5CB27|F5CB27_DELCA DPLTLPDPGTFSRFESTRSGRRMELSLGTIQANRTGTGLLLTLQPD---- tr|F5H241|F5H241_HUMAN -------------------------------------------------- tr|B7Z6S9|B7Z6S9_HUMAN DPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQ P04062 KVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASC tr|A9UD35|A9UD35_DELDE KVK----------------------------------------------- tr|D1L2S0|D1L2S0_BALPH -------------------------------------------------- pdb|pdb|3gxi_A KVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASC pdb|pdb|2nt1_A KVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASC tr|F6WDY8|F6WDY8_HORSE KVKGFGGAMTDAAALNILALSPAARNLLLKSYFSEEGIEYNIIRVPMASC sp|Q2KHZ8|GLCM_BOVIN KVKGFGGAMTDAAALNILALSPAARNLLLKSYFSEEGIEYNIIRVPMASC tr|F5CB27|F5CB27_DELCA -------------------------------------------------- tr|F5H241|F5H241_HUMAN -----------------------------------SGIGYNIIRVPMASC tr|B7Z6S9|B7Z6S9_HUMAN KVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASC P04062 DFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLA tr|A9UD35|A9UD35_DELDE -------------------------------------------------- tr|D1L2S0|D1L2S0_BALPH -------------------------------------------------- pdb|pdb|3gxi_A DFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLA pdb|pdb|2nt1_A DFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLA tr|F6WDY8|F6WDY8_HORSE DFSIRVYTYADTPDDFQLHNFSLPEEDVKLKIPLIHQALELSQRPISLFA sp|Q2KHZ8|GLCM_BOVIN DFSIRTYTYDDSPDDFQLLNFSLPEEDVKLKIPLIHQALELANRSVSLFA tr|F5CB27|F5CB27_DELCA -------------------------------------------------- tr|F5H241|F5H241_HUMAN DFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLA tr|B7Z6S9|B7Z6S9_HUMAN DFSIRTYTYADTPDDFQLHNFGLPEEDTKLKIPLIHRALQLAQRPVSLLA P04062 SPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQ tr|A9UD35|A9UD35_DELDE -------------------------------------------------- tr|D1L2S0|D1L2S0_BALPH -------------------------------------------------- pdb|pdb|3gxi_A SPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQ pdb|pdb|2nt1_A SPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQ tr|F6WDY8|F6WDY8_HORSE SPWTSPTWLKTNGAVNGKGSLKGQPGDRYHQTWAKYFVKFLDAYAEHKLQ sp|Q2KHZ8|GLCM_BOVIN SPWTSPTWLKTNGAVNGKGTLKGQAGDLYHKTWARYFVKFLDAYAEHKLR tr|F5CB27|F5CB27_DELCA -------------------------------------------------- tr|F5H241|F5H241_HUMAN SPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQ tr|B7Z6S9|B7Z6S9_HUMAN SPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQ P04062 FWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNV tr|A9UD35|A9UD35_DELDE -------------------------------------------------- tr|D1L2S0|D1L2S0_BALPH -------------------------------------------------- pdb|pdb|3gxi_A FWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNV pdb|pdb|2nt1_A FWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNV tr|F6WDY8|F6WDY8_HORSE FWAVTTENEPSAGLISGYPFQCLGFTPEHQRDFIARDLGPTLANSTHRNV sp|Q2KHZ8|GLCM_BOVIN FWAVTAENEPTAGLLTGYPFQCLGFTPEHQRDFIARDLGPILANSTHRDV tr|F5CB27|F5CB27_DELCA -------------------------------------------------- tr|F5H241|F5H241_HUMAN FWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNV tr|B7Z6S9|B7Z6S9_HUMAN FWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNV P04062 RLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGE tr|A9UD35|A9UD35_DELDE -------------------------------------------------- tr|D1L2S0|D1L2S0_BALPH -------------------------------------------------- pdb|pdb|3gxi_A RLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGE pdb|pdb|2nt1_A RLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGE tr|F6WDY8|F6WDY8_HORSE RVLMLDDQRLLLPRWAQVVLADPEAAKYVHGIAVHWYLDFLAPAKATLGE sp|Q2KHZ8|GLCM_BOVIN RLLMLDDQRLLLPRWAQVVLADPEAAKYVHGIAVHWYLDFLAPAKATLGE tr|F5CB27|F5CB27_DELCA -------------------------------------------------- tr|F5H241|F5H241_HUMAN RLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGE tr|B7Z6S9|B7Z6S9_HUMAN RLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGE P04062 THRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVV tr|A9UD35|A9UD35_DELDE -------------------------------------------------- tr|D1L2S0|D1L2S0_BALPH -------------------------------------------------- pdb|pdb|3gxi_A THRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVV pdb|pdb|2nt1_A THRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVV tr|F6WDY8|F6WDY8_HORSE THRLFPDMMLFASEACVGSKFWEQSVRLGSWDRGVQYSHSIITNLLYHVA sp|Q2KHZ8|GLCM_BOVIN THRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMRYSHSIITNLLYHVV tr|F5CB27|F5CB27_DELCA -------------------------------------------------- tr|F5H241|F5H241_HUMAN THRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVV tr|B7Z6S9|B7Z6S9_HUMAN THRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVV P04062 GWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKF tr|A9UD35|A9UD35_DELDE -------------------------------------------------- tr|D1L2S0|D1L2S0_BALPH -------------------------------------------------- pdb|pdb|3gxi_A GWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKF pdb|pdb|2nt1_A GWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKF tr|F6WDY8|F6WDY8_HORSE GWTDWNLALNPEGGPNWVRNFVDSPIIVDIAKDTFYKQPMFYHLGHFSKF sp|Q2KHZ8|GLCM_BOVIN GWTDWNLALNPEGGPNWVRNFVDSPIIVDIAKDTFYKQPMFYHLGHFSKF tr|F5CB27|F5CB27_DELCA -------------------------------------------------- tr|F5H241|F5H241_HUMAN GWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKF tr|B7Z6S9|B7Z6S9_HUMAN GWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKF P04062 IPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPA tr|A9UD35|A9UD35_DELDE -------------------------------------------------- tr|D1L2S0|D1L2S0_BALPH -------------------------------------------------- pdb|pdb|3gxi_A IPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPA pdb|pdb|2nt1_A IPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPA tr|F6WDY8|F6WDY8_HORSE IPEGSQRVGLDASEKTNLDTVALMHPDGSAVVVVLNRSSKDVPLTIKDPA sp|Q2KHZ8|GLCM_BOVIN IPEGSQRVGLVASKKSDLDTVALLRPDGSAVAVVLNRSSKDVPLTIKDPA tr|F5CB27|F5CB27_DELCA -------------------------------------------------- tr|F5H241|F5H241_HUMAN IPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPA tr|B7Z6S9|B7Z6S9_HUMAN IPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPA P04062 VGFLETISPGYSIHTYLWRRQ tr|A9UD35|A9UD35_DELDE --------------------G tr|D1L2S0|D1L2S0_BALPH --------------------D pdb|pdb|3gxi_A VGFLETISPGYSIHTYLWHRQ pdb|pdb|2nt1_A VGFLETISPGYSIHTYLWHRQ tr|F6WDY8|F6WDY8_HORSE VGFLETVSPGYSIHTYLWRRQ sp|Q2KHZ8|GLCM_BOVIN VGFMETVSPGYSIHTYLWRRQ tr|F5CB27|F5CB27_DELCA --------------------- tr|F5H241|F5H241_HUMAN VGFLETISPGYSIHTYLWRRQ tr|B7Z6S9|B7Z6S9_HUMAN VGFLETISPGYSIHTYLWRRQ
