Sequence-based predictions
From Bioinformatikpedia
Contents
Sequence-based predictions
1. Secondary structure prediction
PSIPRED
Jpred3
Comparison with DSSP
2. Prediction of disordered regions
DISOPRED
POODLE
IUPRED
3. Prediction of transmembrane alpha-helices and signal peptides
TMHMM
Phobius and PolyPhobius
OCTOPUS and SPOCTOPUS
SignalP
TargetP
4. Prediction of GO terms
GOPET
| GOID | Aspect | Confidence | GO Term |
|---|---|---|---|
| GO:0004872 | F | 91% | receptor activity |
| GO:0030106 | F | 88% | MHC class I receptor activity |
