Fabry:Annotated SNPs

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Revision as of 12:20, 10 June 2012 by Rackersederj (talk | contribs) (Disease causing SNPs)
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Disease causing SNPs

Pos	SNP	Annotation
1	M1T	HGMD 
1	M1R	HGMD 
1	M1I	HGMD 
14	L14P	HGMD 
16	L16P	HGMD 
18	F18S	HGMD 
19	L19P	HGMD 
20	A20P	Omim SNPedia SNPdbe HGMD 
31	A31V	HGMD 
32	L32P	HGMD 
34	N34S	Omim SNPedia SNPdbe HGMD 
34	N34K	HGMD 
35	G35R	HGMD 
36	L36F	HGMD 
36	L36S	HGMD 
40	P40S	Omim SNPedia SNPdbe HGMD 
40	P40L	HGMD 
41	T41I	HGMD 
42	M42T	HGMD 
42	M42V	HGMD 
42	M42L	HGMD 
43	G43D	HGMD 
43	G43R	HGMD 
43	G43V	HGMD 
44	W44X	Omim SNPedia 
44	W44C	HGMD 
44	W44*	HGMD 
46	H46R	HGMD 
46	H46Y	HGMD 
47	W47L	HGMD 
47	W47G	HGMD 
48	E48K	HGMD 
49	R49S	HGMD 
49	R49G	HGMD 
49	R49L	HGMD 
49	R49P	HGMD 
50	F50C	HGMD 
51	M51I	HGMD 
51	M51K	HGMD 
52	C52S	HGMD 
52	C52R	HGMD 
52	C52*	HGMD 
54	L54P	HGMD 
56	C56*	HGMD 
56	C56F	HGMD 
56	C56G	Omim SNPedia SNPdbe HGMD 
56	C56Y	HGMD 
59	E59K	HGMD 
63	C63Y	HGMD 
65	S65T	Omim SNPedia SNPdbe 
66	E66G	HGMD 
66	E66Q	Omim SNPedia SNPdbe HGMD 
66	E66K	HGMD 
68	L68F	HGMD 
72	M72I	HGMD 
72	M72V	HGMD 
72	M72R	HGMD 
73	A73V	HGMD 
76	M76T	HGMD 
78	S78*	HGMD 
79	E79*	HGMD 
81	W81S	HGMD 
81	W81*	HGMD 
85	G85D	HGMD 
86	Y86C	HGMD 
86	Y86*	HGMD 
88	Y88D	HGMD 
89	L89R	HGMD 
89	L89P	HGMD 
91	I91T	HGMD 
92	D92Y	HGMD 
92	D92N	HGMD 
92	D92H	HGMD 
93	D93G	HGMD 
93	D93N	HGMD 
93	D93V	HGMD 
94	C94S	HGMD 
94	C94Y	SNPdbe HGMD 
95	W95S	HGMD 
95	W95*	HGMD 
97	A97P	HGMD 
97	A97V	HGMD 
99	Q99*	HGMD 
100	R100T	HGMD 
100	R100K	HGMD 
102	S102*	HGMD 
103	E103Q	HGMD 
106	L106R	HGMD 
107	Q107*	HGMD 
112	R112H	HGMD 
112	R112S	HGMD 
112	R112C	Omim SNPedia SNPdbe HGMD 
113	F113S	HGMD 
113	F113L	HGMD 
118	R118C	SNPdbe HGMD 
119	Q119*	HGMD 
121	A121P	HGMD 
125	H125P	HGMD 
126	S126G	SNPdbe HGMD 
127	K127*	HGMD 
128	G128E	HGMD 
129	L129P	HGMD 
131	L131P	HGMD 
132	G132R	HGMD 
134	Y134*	HGMD 
134	Y134S	HGMD 
135	A135V	HGMD 
136	D136H	HGMD 
138	G138R	HGMD 
138	G138E	HGMD 
141	T141I	HGMD 
142	C142*	HGMD 
142	C142Y	HGMD 
142	C142W	HGMD 
142	C142R	HGMD 
143	A143T	Omim SNPedia SNPdbe HGMD 
143	A143P	Omim SNPedia SNPdbe HGMD 
144	G144V	HGMD 
146	P146S	Omim SNPedia SNPdbe HGMD 
147	G147R	HGMD 
148	S148R	HGMD 
148	S148N	HGMD 
151	Y151*	HGMD 
152	Y152*	HGMD 
155	D155H	SNPdbe HGMD 
156	A156V	HGMD 
156	A156T	Omim SNPedia SNPdbe HGMD 
157	Q157*	HGMD 
162	W162*	HGMD 
162	W162R	Omim SNPedia SNPdbe HGMD 
162	W162C	HGMD 
163	G163V	HGMD 
165	D165V	HGMD 
165	D165H	HGMD 
166	L166V	HGMD 
167	L167P	HGMD 
168	K168R	HGMD 
169	F169S	HGMD 
170	D170V	HGMD 
170	D170H	HGMD 
171	G171D	HGMD 
171	G171C	HGMD 
171	G171R	HGMD 
172	C172Y	HGMD 
172	C172G	HGMD 
172	C172R	HGMD 
172	C172F	HGMD 
172	C172W	HGMD 
173	Y173*	HGMD 
177	L177*	HGMD 
183	G183S	HGMD 
183	G183D	HGMD 
187	M187T	HGMD 
187	M187V	HGMD 
191	L191P	SNPdbe HGMD 
191	L191Q	HGMD 
194	T194I	HGMD 
199	V199M	HGMD 
201	S201F	HGMD 
201	S201Y	HGMD 
202	C202Y	HGMD 
202	C202W	Omim SNPedia SNPdbe HGMD 
204	W204*	HGMD 
205	P205T	HGMD 
205	P205R	HGMD 
205	P205L	HGMD 
207	Y207S	HGMD 
215	N215S	Omim SNPedia SNPdbe HGMD 
216	Y216D	HGMD 
220	R220*	HGMD 
221	Q221*	HGMD 
222	Y222*	HGMD 
222	Y222X	Omim SNPedia 
223	C223R	HGMD 
223	C223Y	HGMD 
223	C223G	HGMD 
224	N224S	HGMD 
224	N224D	HGMD 
225	H225R	HGMD 
226	W226R	HGMD 
226	W226C	HGMD 
226	W226*	HGMD 
227	R227Q	Omim SNPedia SNPdbe HGMD 
227	R227X	Omim SNPedia 
227	R227*	HGMD 
230	A230T	HGMD 
231	D231N	HGMD 
231	D231V	HGMD 
234	D234E	HGMD 
234	D234Y	HGMD 
235	S235C	HGMD 
235	S235F	HGMD 
236	W236L	HGMD 
236	W236*	HGMD 
236	W236R	HGMD 
236	W236C	HGMD 
238	S238N	HGMD 
239	I239T	HGMD 
242	I242N	HGMD 
243	L243F	HGMD 
244	D244H	HGMD 
244	D244N	HGMD 
245	W245*	HGMD 
247	S247P	HGMD 
247	S247C	HGMD 
250	Q250P	HGMD 
250	Q250*	HGMD 
251	E251*	HGMD 
257	A257P	HGMD 
258	G258R	HGMD 
258	G258V	HGMD 
259	P259R	HGMD 
259	P259L	HGMD 
260	G260A	HGMD 
261	G261D	HGMD 
262	W262*	HGMD 
262	W262C	HGMD 
263	N263S	HGMD 
264	D264Y	SNPdbe HGMD 
264	D264V	Omim SNPedia SNPdbe HGMD 
265	P265R	HGMD 
265	P265L	HGMD 
266	D266V	Omim SNPedia SNPdbe HGMD 
266	D266Y	HGMD 
266	D266H	HGMD 
266	D266N	HGMD 
266	D266E	HGMD 
267	M267R	HGMD 
267	M267I	HGMD 
268	L268S	HGMD 
269	V269M	HGMD 
269	V269A	Omim SNPedia SNPdbe HGMD 
270	I270T	HGMD 
271	G271C	HGMD 
271	G271S	HGMD 
271	G271V	HGMD 
272	N272S	Omim SNPedia SNPdbe HGMD 
272	N272K	HGMD 
276	S276N	HGMD 
276	S276G	HGMD 
277	W277*	HGMD 
279	Q279H	HGMD 
279	Q279E	Omim SNPedia SNPdbe HGMD 
279	Q279R	HGMD 
280	Q280K	HGMD 
280	Q280H	HGMD 
282	T282N	HGMD 
282	T282A	HGMD 
283	Q283P	HGMD 
284	M284T	HGMD 
285	A285D	HGMD 
285	A285P	HGMD 
287	W287X	Omim SNPedia 
287	W287C	HGMD 
287	W287G	HGMD 
287	W287*	HGMD 
288	A288P	HGMD 
288	A288D	HGMD 
289	I289S	HGMD 
289	I289F	HGMD 
290	M290I	HGMD 
291	A291T	HGMD 
292	A292P	HGMD 
292	A292T	SNPdbe HGMD 
293	P293A	HGMD 
293	P293T	HGMD 
293	P293S	HGMD 
294	L294*	HGMD 
296	M296I	Omim SNPedia SNPdbe HGMD 
296	M296V	Omim SNPedia SNPdbe HGMD 
297	S297F	Omim SNPedia SNPdbe HGMD 
297	S297C	HGMD 
298	N298K	HGMD 
298	N298H	HGMD 
298	N298S	HGMD 
300	L300H	HGMD 
300	L300F	HGMD 
301	R301G	HGMD 
301	R301*	HGMD 
301	R301P	HGMD 
301	R301Q	Omim SNPedia SNPdbe HGMD 
303	I303N	HGMD 
306	Q306*	HGMD 
308	K308N	HGMD 
310	L310F	HGMD 
312	Q312H	HGMD 
312	Q312R	HGMD 
313	D313Y	Omim SNPedia SNPdbe HGMD 
316	V316E	HGMD 
317	I317N	HGMD 
317	I317T	HGMD 
320	N320K	HGMD 
320	N320Y	HGMD 
320	N320I	HGMD 
321	Q321R	HGMD 
321	Q321L	HGMD 
321	Q321E	HGMD 
321	Q321*	HGMD 
325	G325D	HGMD 
327	Q327E	HGMD 
327	Q327K	Omim SNPedia SNPdbe HGMD 
328	G328A	Omim SNPedia SNPdbe HGMD 
328	G328R	Omim SNPedia SNPdbe HGMD 
328	G328V	HGMD 
330	Q330*	HGMD 
333	Q333*	HGMD 
338	E338K	HGMD 
338	E338*	HGMD 
340	W340*	HGMD 
340	W340X	Omim SNPedia 
340	W340R	HGMD 
341	E341K	HGMD 
341	E341D	HGMD 
342	R342X	Omim SNPedia 
342	R342Q	Omim SNPedia SNPdbe HGMD 
342	R342*	HGMD 
344	L344P	HGMD 
345	S345P	HGMD 
348	A348P	HGMD 
349	W349*	HGMD 
350	A350P	HGMD 
352	A352D	HGMD 
355	N355K	HGMD 
356	R356W	Omim SNPedia SNPdbe HGMD 
357	Q357*	HGMD 
358	E358G	HGMD 
358	E358K	HGMD 
358	E358A	HGMD 
360	G360S	HGMD 
360	G360C	HGMD 
361	G361R	Omim SNPdbe HGMD 
362	P362L	HGMD 
363	R363C	HGMD 
363	R363H	SNPdbe HGMD 
365	Y365X	Omim SNPedia 
365	Y365*	HGMD 
373	G373D	HGMD 
373	G373S	HGMD 
377	A377D	HGMD 
378	C378R	HGMD 
378	C378Y	HGMD 
382	C382Y	SNPdbe HGMD 
382	C382W	HGMD 
384	I384N	HGMD 
385	T385P	HGMD 
386	Q386*	HGMD 
386	Q386P	HGMD 
398	E398*	HGMD 
398	E398K	HGMD 
398	E398X	Omim SNPedia 
399	W399*	HGMD 
401	S401*	HGMD 
403	L403S	HGMD 
407	I407K	HGMD 
409	P409T	HGMD 
409	P409A	HGMD 
409	P409S	HGMD 
410	T410A	Omim SNPedia SNPdbe HGMD 
410	T410K	HGMD 
410	T410P	HGMD 
411	G411D	HGMD 
414	L414S	HGMD 
415	L415P	SNPdbe HGMD

Non-disease causing SNPs

Pos	SNP	Annotation
3	L3P	SNPdbe 
29	A29T	SNPdbe 
41	T41=	dbSNP 
43	G43=	dbSNP 
45	L45=	dbSNP 
112	R112=	dbSNP 
117	I117S	SNPdbe 
118	R118H	SNPdbe 
139	N139S	SNPdbe 
140	K140T	SNPdbe 
143	A143=	dbSNP 
174	C174G	SNPdbe 
186	H186R	SNPdbe 
235	S235=	dbSNP 
243	L243W	SNPdbe 
252	R252T	SNPdbe 
289	I289V	SNPdbe 
315	D315=	dbSNP 
316	V316I	SNPdbe 
323	P323T	SNPdbe 
326	K326=	dbSNP 
368	A368P	SNPdbe 
421	M421V	SNPdbe