Task 4: Homology-based structure prediction
From Bioinformatikpedia
More detailed information about the generation of the results can be found in the Task 4 Protocol.
Datasets
In order to generate a model for our protein we first need to find homologous structures on which we base our model on. For this task we use HHpred and COMA.
HHpred
| PDB ID | e-Value | Identity | Similarity |
|---|---|---|---|
| >80% Sequence Similarity | |||
| 2BFD | 1.2e-84 | 99% | 1.508 |
| 80-40% Sequence Similarity | |||
| 1qs0_A | 1.1e-79 | 39% | 0.580 |
| <30% Sequence Similarity | |||
| 1w85_A | 3.6e-76 | 32% | 0.576 |
COMA
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