Structure-based mutation analysis BCKDHA
From Bioinformatikpedia
Contents
Structure selection
The following table presents the PDB structures for BCKDHA to date:
PDB id | resolution [Å] | R-factor | coverage | ph-value |
---|---|---|---|---|
1DTW | 2.70 | 0.224 | 7.5* | |
1OLS | 1.85 | 0.172 | 5.5 | |
1OLU | 1.90 | 0.161 | 5.5 | |
1OLX | 2.25 | 0.161 | 5.5 | |
1U5B | 1.83 | 0.156 | 5.8 | |
1V11 | 1.95 | 0.139* | 5.5 | |
1V16 | 1.90 | 0.132* | 5.5 | |
1V1M | 2.00 | 0.130* | 5.5 | |
1V1R | 1.80 | 0.158 | 5.5 | |
1WCI | 1.84 | 0.149 | 5.5 | |
1X7W | 1.73 | 0.148 | 5.8 | |
1X7X | 2.10 | 0.149 | 5.8 | |
1X7Y | 1.57 | 0.150 | 5.8 | |
1X7Z | 1.72 | 0.154 | 5.8 | |
1X80 | 2.00 | 0.161 | 5.8 | |
2BEU | 1.89 | 0.171 | 5.5 | |
2BEV | 1.80 | 0.139 | 5.5 | |
2BEW | 1.79 | 0.147 | 5.5 | |
2BFB | 1.77 | 0.145 | 5.5 | |
2BFC | 1.64 | 0.144 | 5.5 | |
2BFD | 1.39* | 0.150 | 5.5 | |
2BFE | 1.69 | 0.150 | 5.5 | |
2BFF | 1.46 | 0.150 | 5.5 | |
2J9F | 1.88 | 0.171 | 5.5 |
The following PDB Structure was chosen because of its good experimental resolution: <bold></bold>
- resultion:
- R-factor
- ph-value
Comparison energies
Mapping of the mutations on thw crystal structure
SCWRL
foldX
gromacs
Gromacs
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