CD task10 protocol

Script with all analysis steps

In this script, all the required commands for the analysis methods are listed.

analysis.sh

Pymol visualisation

simple Pymol visalization script

create_pymol_vis.py

mencoder "mf://*.png" -mf w=640:h=480:type=png -ofps 25 -ovc lavc -lavcopts vcodec=mpeg4:vpass=1:vbitrate=5000000:mbd=2:keyint=132:v4mv:vqmin=3:lumi_mask=0.07:dark_mask=0.2:scplx_mask=0.1:tcplx_mask=0.1:naq -o wt_movie4.avi