Difference between revisions of "Structure-based mutation analysis ARSA"
From Bioinformatikpedia
(→Preparation) |
|||
| Line 1: | Line 1: | ||
=== Preparation === |
=== Preparation === |
||
| − | [[File:arsamodel.png | 200px | center | thumb | Pymol visualization of ARSA (with closed gaps). The active site is depicted in yellow, metal-binding site in blue, substrate binding sites in green and missense mutations in red.]] |
||
| + | ==== Visualization with Pymol ==== |
||
| + | |||
| + | [[File:arsamodel.png | 200px | center | thumb | Pymol visualization of ARSA (with closed gaps). The active site is depicted in yellow, metal-binding site in blue, substrate binding sites in green and missense mutations in red.]] |
||
| + | ==== SCRWL ==== |
||
=== BLA === |
=== BLA === |
||
Revision as of 08:09, 30 June 2011
Preparation
Visualization with Pymol
SCRWL
BLA
repairPDB arsa_model.pdb -seq > arsa.model.seq
tr '[:upper:]' '[:lower:]' < arsa.model.seq > arsa.model.lower.seq
