Difference between revisions of "Structure-based mutation analysis ARSA"

From Bioinformatikpedia
(BLA)
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=== Preparation ===
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[[File:arsamodel.png | 200px | center | thumb | Pymol visualization of ARSA (with closed gaps). The active site is depicted in yellow, metal-binding site in blue, substrate binding sites in green and missense mutations in red.]]
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=== BLA ===
 
=== BLA ===
   

Revision as of 07:48, 30 June 2011

Preparation

Pymol visualization of ARSA (with closed gaps). The active site is depicted in yellow, metal-binding site in blue, substrate binding sites in green and missense mutations in red.


BLA


repairPDB arsa_model.pdb -seq > arsa.model.seq
tr '[:upper:]' '[:lower:]' < arsa.model.seq > arsa.model.lower.seq