Difference between revisions of "Talk:Glucocerebrosidase sequence alignments"
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* Change the output format of Blast to give you more than 500 sequences and more than 250 details. |
* Change the output format of Blast to give you more than 500 sequences and more than 250 details. |
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* Document how you converted the accession numbers for the HSSP comparison. |
* Document how you converted the accession numbers for the HSSP comparison. |
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| + | * In "Comparison to HSSP" for HHsearch you should only consider the sequences with pdb structures since HHsearch only searches structures. |
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Revision as of 14:07, 15 June 2011
Very nice protocol.
Some hints on what could be even nicer ;-) (You do not need to do this, just to give you feedback) :
- Change the output format of Blast to give you more than 500 sequences and more than 250 details.
- Document how you converted the accession numbers for the HSSP comparison.
- In "Comparison to HSSP" for HHsearch you should only consider the sequences with pdb structures since HHsearch only searches structures.
