Difference between revisions of "Task 5: Homology Modeling"

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[[lab journal task 4]]
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[[lab journal task 5]]
   
 
==Modeller==
 
==Modeller==

Revision as of 22:12, 25 August 2013

lab journal task 5

Modeller

Single template

Target: 1A6Z chain A

Template SeqID std Alignment 2d alignment curated Alignment
1QVO_A 0.39
1S7X_A 0.29
1cd1_A 0.21


MSA:

"close" homology
1rjz_D 0.34
1zag_A 0.36
1QVO_A 0.39
distant homology:
3huj_C 0.23
1cd1_A 0.21
1VZY_A 0.14
MIX:
1cd1_A 0.21
1QVO_A 0.39

Swiss-Modell

I-TASSER