Difference between revisions of "Task 7: Research SNPs"

Revision as of 19:25, 23 June 2013

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HGMD

synonymous SNPS in coding region of isoform 1 human and trainscript variant 1

MAF	SNP allel	residue	codon position	aa position
9E-4	G -> A	Pro	3	7
5E-4	C -> T	Phe	3	58
3.2E-3	T -> C	His	3	63
5E-4	C -> T	Ser	3	76
-	C -> G	Ala	3	162
5E-4	T -> A	Pro	3	253
-	C -> T	Pro	3	292
5E-4	G -> A	Glu	3	298
-	T -> C	Val	3	315
6.4E-3	C -> T	Tyr	3	342

@@ Line 51: / Line 51: @@
 {| class="colBasic2"
-! cluster ID | MAF | SNP allel | residue | codon position | aa position
+! cluster ID || MAF || SNP allel || residue || codon position || aa position
 |-
-| | 9E-4 | G -> A | 3 | 7
+| || 9E-4 || G -> A || Pro || 3 || 7
 |-
+| || 5E-4 || C -> T || Phe || 3 || 58
+|-
+| || 3.2E-3 || T -> C || His || 3 || 63
+|-
+| || 5E-4 || C -> T || Ser || 3 || 76
+|-
+| || - || C -> G || Ala || 3 || 162
+|-
+| || 5E-4 || T -> A || Pro || 3 || 253
+|-
+| || - || C -> T || Pro || 3 || 292
+|-
+| || 5E-4 || G -> A || Glu || 3 || 298
+|-
+| || - || T -> C || Val || 3 || 315
+|-
+| || 6.4E-3 || C -> T || Tyr || 3 || 342
 |}