Difference between revisions of "TSD Modeller 3gh5 Edited Alignment"

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KRKAMRTDTAVGYSTLMPRAEITYQFVEDVISELAAISPSPYIHLGGD<font color=blue>'''E'''</font>SNAT----------------<font color=red>SAA
 
KRKAMRTDTAVGYSTLMPRAEITYQFVEDVISELAAISPSPYIHLGGD<font color=blue>'''E'''</font>SNAT----------------<font color=red>SAA
 
DYDYFFGRVTAIANSY</font>----GKKVVGWDPS-DTSSGATSDSVLQNWTCSASTGTAAKAKGMKVIVSPANAYL
 
DYDYFFGRVTAIANSY</font>----GKKVVGWDPS-DTSSGATSDSVLQNWTCSASTGTAAKAKGMKVIVSPANAYL
DMKYYS<font color=blue>'''D'''</font>S-PIGLQWRGF-VNTNRAYNWDPTDCIKGANIYGVESTLWTETFVTQDHLDYMLYPKLLSNAEVG
+
DMKYYS<font color=blue>'''D'''</font>S-PIGLQWRGF-VNTNRAYNWDPTDCIKGANIYGVESTLWT<font color=blue>E</font>TFVTQDHLDYMLYPKLLSNAEVG
 
WTARGDRNWDDFKERLIEHTPRLQNKGIKFFADPI<font color=red>V</font>---------*
 
WTARGDRNWDDFKERLIEHTPRLQNKGIKFFADPI<font color=red>V</font>---------*
 
>P1;P06865
 
>P1;P06865

Revision as of 13:12, 2 June 2012

>P1;3GH5
structureX:../../input/3GH5.pdb: -16 :A:+507 :A:MOL_ID  1; MOLECULE  BETA-HEXOSAMINIDASE; CHAIN  A; [...]
HHHHSSGLVPRGSHMASMSQPSILPKPVSYTVGSGQFVLTKNASIFVAGNNVGETDELFNIGQALAKKLNAS
TG-------YTISVVKSNQPTAGSIYLTTVGGN---AALGNEGYDLITTSNQVTLTANKPEGVFRGNQTLLQ
LLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQIDLASQYKINKFHMHLSDDQ
GWRIEIKSWPDLIEIGSKGQVGGGPGGYYTQEQFKDIVSYAAERYIEVIPEIDMPGHTNAALASYGELNPDG
KRKAMRTDTAVGYSTLMPRAEITYQFVEDVISELAAISPSPYIHLGGDESNAT----------------SAA
DYDYFFGRVTAIANSY----GKKVVGWDPS-DTSSGATSDSVLQNWTCSASTGTAAKAKGMKVIVSPANAYL
DMKYYSDS-PIGLQWRGF-VNTNRAYNWDPTDCIKGANIYGVESTLWTETFVTQDHLDYMLYPKLLSNAEVG
WTARGDRNWDDFKERLIEHTPRLQNKGIKFFADPIV---------*
>P1;P06865
sequence::     : :     : :::-1.00:-1.00
MTSSRLWFSLLLAAAFAGRATALWPWPQNFQTSDQRYVLYPNNFQFQYDVSSAAQPGCSVLDEAFQRYRDLL
FGSGSWPRPYLTGKRHTLEKNVLVVSVVTPGCNQLPTLESVENYTLTINDDQCLLLSETVWGALRGLETFSQ
LVWKSAEGT-------FFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDP
SFPYESFTFPELMRKGSYNPVTH----IYTAQDVKEVIEYARLRGIRVLAEFDTPGHTLSWGPGIPGLLTPC
YSGSEPSGT---FGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDFTCWKSNPEIQDFMRKKGFGE
DFKQLESFYIQTLLDIVSSYGKGYVVWQEVFDNKVKIQPDTIIQVWREDIPVNYMKELE--LVTKAGFRALL
SAPWYLNRISYGPDWKDFYIVEPLAFEGTPE---QKALVIGGEACMWGE-YVDNTNLVPRLWPRAGAVAERL
WSNKLTSDLTFAYERLSHFRCELLRRGVQAQPLNVGFCEQEFEQT*